FFCP PHASE1:Mm9::chr8:124954456..124954465,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:124954456..124954465,+|id=chr8:124954456..124954465,+|ontology_enrichment_celltype=CL:0000049!2.57e-13!19;CL:0000988!2.23e-10!32;CL:0002032!2.23e-10!32;CL:0000037!2.23e-10!32;CL:0000566!2.23e-10!32;CL:0000837!2.23e-10!32;CL:0000557!2.44e-10!7;CL:0000763!6.92e-08!16|ontology_enrichment_celltype_v019_2=CL:0002476,8.27e-17,2;CL:0000557,1.08e-10,7;CL:0000945,3.04e-09,1;CL:0000236,3.04e-09,1;CL:0000826,3.04e-09,1;CL:0002194,6.98e-09,4;CL:0000766,6.98e-09,4;CL:0000234,6.98e-09,4;CL:0000576,6.98e-09,4;CL:0000235,6.98e-09,4;CL:0000864,6.98e-09,4;CL:0002009,6.98e-09,4;CL:0000040,6.98e-09,4;CL:0000559,6.98e-09,4;CL:0000355,1.25e-08,9;CL:0000049,7.07e-07,19|ontology_enrichment_disease=DOID:0060100!7.57e-10!3;DOID:4045!7.57e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.36e-24,3;DOID:4045,1.36e-24,3;DOID:0050686,1.20e-12,6|ontology_enrichment_uberon=UBERON:0002371!6.92e-08!16;UBERON:0002204!2.80e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.50e-09,32;UBERON:0001134,1.25e-08,9;UBERON:0002036,1.25e-08,9;UBERON:0002385,1.25e-08,9;UBERON:0000486,1.25e-08,9;UBERON:0007503,1.25e-08,9;UBERON:0001015,1.25e-08,9;UBERON:0002329,1.25e-08,9;UBERON:0003082,1.25e-08,9;UBERON:0003059,1.25e-08,9;UBERON:0007282,1.25e-08,9;UBERON:0004290,1.25e-08,9;UBERON:0009618,1.25e-08,9;UBERON:0000383,8.07e-08,10;UBERON:0007524,3.71e-07,11;UBERON:0003077,3.71e-07,11;UBERON:0007285,3.71e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630924330716475,0.274228867211478,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,3.76678467663217,4.6880120671428,1.57057123192139,20.5881020810855,6.14740936462601,5.82612423637384,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0,3.01582567878545,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0,0.686334519619568,0,0.559805809294632,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr8:124954456..124954465,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:124954456..124954465,+ | |||
|id=chr8:124954456..124954465,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.57e-13!19;CL:0000988!2.23e-10!32;CL:0002032!2.23e-10!32;CL:0000037!2.23e-10!32;CL:0000566!2.23e-10!32;CL:0000837!2.23e-10!32;CL:0000557!2.44e-10!7;CL:0000763!6.92e-08!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,8.27e-17,2;CL:0000557,1.08e-10,7;CL:0000945,3.04e-09,1;CL:0000236,3.04e-09,1;CL:0000826,3.04e-09,1;CL:0002194,6.98e-09,4;CL:0000766,6.98e-09,4;CL:0000234,6.98e-09,4;CL:0000576,6.98e-09,4;CL:0000235,6.98e-09,4;CL:0000864,6.98e-09,4;CL:0002009,6.98e-09,4;CL:0000040,6.98e-09,4;CL:0000559,6.98e-09,4;CL:0000355,1.25e-08,9;CL:0000049,7.07e-07,19 | |||
|ontology_enrichment_disease=DOID:0060100!7.57e-10!3;DOID:4045!7.57e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.36e-24,3;DOID:4045,1.36e-24,3;DOID:0050686,1.20e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.92e-08!16;UBERON:0002204!2.80e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.50e-09,32;UBERON:0001134,1.25e-08,9;UBERON:0002036,1.25e-08,9;UBERON:0002385,1.25e-08,9;UBERON:0000486,1.25e-08,9;UBERON:0007503,1.25e-08,9;UBERON:0001015,1.25e-08,9;UBERON:0002329,1.25e-08,9;UBERON:0003082,1.25e-08,9;UBERON:0003059,1.25e-08,9;UBERON:0007282,1.25e-08,9;UBERON:0004290,1.25e-08,9;UBERON:0009618,1.25e-08,9;UBERON:0000383,8.07e-08,10;UBERON:0007524,3.71e-07,11;UBERON:0003077,3.71e-07,11;UBERON:0007285,3.71e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630924330716475,0.274228867211478,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,3.76678467663217,4.6880120671428,1.57057123192139,20.5881020810855,6.14740936462601,5.82612423637384,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0,3.01582567878545,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0,0.686334519619568,0,0.559805809294632,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr8:124954456..124954465,+ | |||
}} |
Revision as of 15:01, 14 September 2013
Short description: | p@chr8:124954456..124954465, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:124954456..124954465, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 8.27e-17 | 2 |
granulocyte monocyte progenitor cell | 1.08e-10 | 7 |
lymphocyte of B lineage | 3.04e-09 | 1 |
B cell | 3.04e-09 | 1 |
pro-B cell | 3.04e-09 | 1 |
monopoietic cell | 6.98e-09 | 4 |
myeloid leukocyte | 6.98e-09 | 4 |
phagocyte | 6.98e-09 | 4 |
monocyte | 6.98e-09 | 4 |
macrophage | 6.98e-09 | 4 |
tissue-resident macrophage | 6.98e-09 | 4 |
macrophage dendritic cell progenitor | 6.98e-09 | 4 |
monoblast | 6.98e-09 | 4 |
promonocyte | 6.98e-09 | 4 |
multi-potent skeletal muscle stem cell | 1.25e-08 | 9 |
common myeloid progenitor | 7.07e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.50e-09 | 32 |
skeletal muscle tissue | 1.25e-08 | 9 |
striated muscle tissue | 1.25e-08 | 9 |
muscle tissue | 1.25e-08 | 9 |
multilaminar epithelium | 1.25e-08 | 9 |
epithelial vesicle | 1.25e-08 | 9 |
musculature | 1.25e-08 | 9 |
somite | 1.25e-08 | 9 |
myotome | 1.25e-08 | 9 |
presomitic mesoderm | 1.25e-08 | 9 |
presumptive segmental plate | 1.25e-08 | 9 |
dermomyotome | 1.25e-08 | 9 |
trunk paraxial mesoderm | 1.25e-08 | 9 |
musculature of body | 8.07e-08 | 10 |
dense mesenchyme tissue | 3.71e-07 | 11 |
paraxial mesoderm | 3.71e-07 | 11 |
presumptive paraxial mesoderm | 3.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.36e-24 | 3 |
muscle cancer | 1.36e-24 | 3 |
organ system cancer | 1.20e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.