FFCP PHASE1:Mm9::chr8:72607390..72607407,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330790|HGNC=|MCL_coexpression_id=20|UniProt=Q80WM4|association_with_transcript=-20bp_to_ENSMUST00000007738,NM_177900,uc009lyr.1_5end|description=CAGE_peak_3_at_Hapln4_5end|id=chr8:72607390..72607407,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.05e-09,3;CL:0002614,3.16e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.60e-19!50;UBERON:0006238!2.60e-19!50;UBERON:0001049!3.03e-19!52;UBERON:0005068!3.03e-19!52;UBERON:0006241!3.03e-19!52;UBERON:0007135!3.03e-19!52;UBERON:0002616!1.97e-18!49;UBERON:0000073!1.45e-17!75;UBERON:0001016!1.45e-17!75;UBERON:0001017!2.59e-17!73;UBERON:0005743!2.59e-17!73;UBERON:0000033!3.12e-15!63;UBERON:0002020!8.00e-13!34;UBERON:0002346!4.12e-12!71;UBERON:0003075!4.12e-12!71;UBERON:0007284!4.12e-12!71;UBERON:0003080!3.28e-11!40;UBERON:0004121!3.81e-11!102;UBERON:0000924!3.81e-11!102;UBERON:0006601!3.81e-11!102;UBERON:0002780!2.68e-10!39;UBERON:0001890!2.68e-10!39;UBERON:0006240!2.68e-10!39;UBERON:0002791!3.81e-10!29;UBERON:0003528!3.81e-10!29;UBERON:0001893!3.81e-10!29;UBERON:0002021!6.33e-10!10;UBERON:0000411!6.33e-10!10;UBERON:0001950!6.33e-10!10;UBERON:0003076!8.43e-10!12;UBERON:0003057!8.43e-10!12;UBERON:0002619!8.49e-10!17;UBERON:0002298!5.04e-09!6;UBERON:0000956!1.00e-08!21;UBERON:0001869!1.00e-08!21;UBERON:0000203!1.00e-08!21;UBERON:0003056!1.09e-08!49;UBERON:0007811!2.05e-08!86;UBERON:0000025!1.17e-07!114;UBERON:0004111!1.52e-07!122;UBERON:0000153!6.68e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-25,54;UBERON:0001049,6.53e-22,52;UBERON:0005068,6.53e-22,52;UBERON:0006241,6.53e-22,52;UBERON:0007135,6.53e-22,52;UBERON:0001017,2.86e-21,73;UBERON:0001016,1.48e-20,75;UBERON:0002616,1.84e-20,46;UBERON:0000955,6.26e-20,47;UBERON:0006238,6.26e-20,47;UBERON:0002346,6.88e-17,64;UBERON:0003075,6.88e-17,64;UBERON:0007284,6.88e-17,64;UBERON:0004121,4.61e-15,95;UBERON:0000924,4.61e-15,95;UBERON:0006601,4.61e-15,95;UBERON:0003080,1.53e-14,40;UBERON:0010371,3.32e-14,73;UBERON:0003528,1.27e-13,29;UBERON:0002791,1.27e-13,29;UBERON:0001893,1.27e-13,29;UBERON:0002020,3.99e-13,34;UBERON:0002780,6.34e-13,39;UBERON:0001890,6.34e-13,39;UBERON:0006240,6.34e-13,39;UBERON:0002021,9.60e-13,10;UBERON:0000411,9.60e-13,10;UBERON:0001950,9.60e-13,10;UBERON:0002950,6.20e-12,4;UBERON:0001891,6.20e-12,4;UBERON:0009616,6.20e-12,4;UBERON:0010286,6.20e-12,4;UBERON:0003056,3.16e-11,49;UBERON:0010314,2.86e-10,92;UBERON:0004684,1.05e-09,3;UBERON:0002275,1.05e-09,3;UBERON:0002619,2.57e-09,17;UBERON:0000956,2.80e-09,21;UBERON:0001869,2.80e-09,21;UBERON:0000203,2.80e-09,21;UBERON:0002038,3.16e-09,3;UBERON:0009663,3.16e-09,3;UBERON:0009661,3.16e-09,3;UBERON:0000125,3.16e-09,3;UBERON:0002308,3.16e-09,3;UBERON:0000025,3.42e-09,114;UBERON:0003076,2.55e-08,12;UBERON:0003057,2.55e-08,12;UBERON:0004111,2.99e-08,122;UBERON:0004733,3.88e-08,6;UBERON:0004732,3.88e-08,6;UBERON:0002028,3.88e-08,6;UBERON:0007277,3.88e-08,6;UBERON:0001896,2.81e-07,2;UBERON:0002298,2.81e-07,2;UBERON:0005290,2.81e-07,2;UBERON:0010096,2.81e-07,2|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,2.28520787523043,0.662605622854841,0,0,0,6.60695285996332,7.40586560894089,7.83393319606842,0,0,0,10.8881369610539,2.25105044012672,5.65353516774197,0.589257170947335,0.996601765593721,0,0,0.302286240427142,0,0,1.3599426674155,1.61910957491345,0,0,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,3.77004072264219,0,0,0,0,7.63932260964596,1.83000241127451,0,5.9100268865374,2.04572365864264,5.81806524766768,3.89379031362618,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30869845692382,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2385412991454,8.43924143463863,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.632073515871632,2.10837217149998,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0.23467170806371,1.27099242518292,0.220528398054962,0,0,0,0,0,0,10.198391610578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.717710852875806,0.335769232728157,0,0,0,0,0,1.12950368523413,0.920650473014354,0,0.859265911718438,2.05524755931193,9.82012066606611,6.07520250208625,4.05289082901798,3.62513927187364,6.21312374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| ||
|EntrezGene=330790 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q80WM4 | |||
|association_with_transcript=-20bp_to_ENSMUST00000007738,NM_177900,uc009lyr.1_5end | |||
|description=CAGE_peak_3_at_Hapln4_5end | |||
|id=chr8:72607390..72607407,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.05e-09,3;CL:0002614,3.16e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.60e-19!50;UBERON:0006238!2.60e-19!50;UBERON:0001049!3.03e-19!52;UBERON:0005068!3.03e-19!52;UBERON:0006241!3.03e-19!52;UBERON:0007135!3.03e-19!52;UBERON:0002616!1.97e-18!49;UBERON:0000073!1.45e-17!75;UBERON:0001016!1.45e-17!75;UBERON:0001017!2.59e-17!73;UBERON:0005743!2.59e-17!73;UBERON:0000033!3.12e-15!63;UBERON:0002020!8.00e-13!34;UBERON:0002346!4.12e-12!71;UBERON:0003075!4.12e-12!71;UBERON:0007284!4.12e-12!71;UBERON:0003080!3.28e-11!40;UBERON:0004121!3.81e-11!102;UBERON:0000924!3.81e-11!102;UBERON:0006601!3.81e-11!102;UBERON:0002780!2.68e-10!39;UBERON:0001890!2.68e-10!39;UBERON:0006240!2.68e-10!39;UBERON:0002791!3.81e-10!29;UBERON:0003528!3.81e-10!29;UBERON:0001893!3.81e-10!29;UBERON:0002021!6.33e-10!10;UBERON:0000411!6.33e-10!10;UBERON:0001950!6.33e-10!10;UBERON:0003076!8.43e-10!12;UBERON:0003057!8.43e-10!12;UBERON:0002619!8.49e-10!17;UBERON:0002298!5.04e-09!6;UBERON:0000956!1.00e-08!21;UBERON:0001869!1.00e-08!21;UBERON:0000203!1.00e-08!21;UBERON:0003056!1.09e-08!49;UBERON:0007811!2.05e-08!86;UBERON:0000025!1.17e-07!114;UBERON:0004111!1.52e-07!122;UBERON:0000153!6.68e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-25,54;UBERON:0001049,6.53e-22,52;UBERON:0005068,6.53e-22,52;UBERON:0006241,6.53e-22,52;UBERON:0007135,6.53e-22,52;UBERON:0001017,2.86e-21,73;UBERON:0001016,1.48e-20,75;UBERON:0002616,1.84e-20,46;UBERON:0000955,6.26e-20,47;UBERON:0006238,6.26e-20,47;UBERON:0002346,6.88e-17,64;UBERON:0003075,6.88e-17,64;UBERON:0007284,6.88e-17,64;UBERON:0004121,4.61e-15,95;UBERON:0000924,4.61e-15,95;UBERON:0006601,4.61e-15,95;UBERON:0003080,1.53e-14,40;UBERON:0010371,3.32e-14,73;UBERON:0003528,1.27e-13,29;UBERON:0002791,1.27e-13,29;UBERON:0001893,1.27e-13,29;UBERON:0002020,3.99e-13,34;UBERON:0002780,6.34e-13,39;UBERON:0001890,6.34e-13,39;UBERON:0006240,6.34e-13,39;UBERON:0002021,9.60e-13,10;UBERON:0000411,9.60e-13,10;UBERON:0001950,9.60e-13,10;UBERON:0002950,6.20e-12,4;UBERON:0001891,6.20e-12,4;UBERON:0009616,6.20e-12,4;UBERON:0010286,6.20e-12,4;UBERON:0003056,3.16e-11,49;UBERON:0010314,2.86e-10,92;UBERON:0004684,1.05e-09,3;UBERON:0002275,1.05e-09,3;UBERON:0002619,2.57e-09,17;UBERON:0000956,2.80e-09,21;UBERON:0001869,2.80e-09,21;UBERON:0000203,2.80e-09,21;UBERON:0002038,3.16e-09,3;UBERON:0009663,3.16e-09,3;UBERON:0009661,3.16e-09,3;UBERON:0000125,3.16e-09,3;UBERON:0002308,3.16e-09,3;UBERON:0000025,3.42e-09,114;UBERON:0003076,2.55e-08,12;UBERON:0003057,2.55e-08,12;UBERON:0004111,2.99e-08,122;UBERON:0004733,3.88e-08,6;UBERON:0004732,3.88e-08,6;UBERON:0002028,3.88e-08,6;UBERON:0007277,3.88e-08,6;UBERON:0001896,2.81e-07,2;UBERON:0002298,2.81e-07,2;UBERON:0005290,2.81e-07,2;UBERON:0010096,2.81e-07,2 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,2.28520787523043,0.662605622854841,0,0,0,6.60695285996332,7.40586560894089,7.83393319606842,0,0,0,10.8881369610539,2.25105044012672,5.65353516774197,0.589257170947335,0.996601765593721,0,0,0.302286240427142,0,0,1.3599426674155,1.61910957491345,0,0,0.702222100658759,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,3.77004072264219,0,0,0,0,7.63932260964596,1.83000241127451,0,5.9100268865374,2.04572365864264,5.81806524766768,3.89379031362618,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30869845692382,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2385412991454,8.43924143463863,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.632073515871632,2.10837217149998,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0.23467170806371,1.27099242518292,0.220528398054962,0,0,0,0,0,0,10.198391610578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.717710852875806,0.335769232728157,0,0,0,0,0,1.12950368523413,0.920650473014354,0,0.859265911718438,2.05524755931193,9.82012066606611,6.07520250208625,4.05289082901798,3.62513927187364,6.21312374102184,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Hapln4 | |||
}} |
Revision as of 15:56, 14 September 2013
Short description: | p3@Hapln4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hapln4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -20bp_to_ENSMUST00000007738, NM_177900, uc009lyr.1_5end |
EntrezGene: | Hapln4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.05e-09 | 3 |
neuron of the substantia nigra | 3.16e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.