FFCP PHASE1:Mm9::chr8:86272827..86272852,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:86272827..86272852,+|id=chr8:86272827..86272852,+|ontology_enrichment_celltype=CL:0000988!2.77e-14!32;CL:0002032!2.77e-14!32;CL:0000037!2.77e-14!32;CL:0000566!2.77e-14!32;CL:0000837!2.77e-14!32;CL:0000838!6.08e-12!12;CL:0000084!6.39e-11!11;CL:0000827!6.39e-11!11;CL:0000542!1.15e-10!13;CL:0000051!1.15e-10!13;CL:0002031!1.59e-10!25;CL:0002320!4.40e-10!46;CL:0000134!4.40e-10!46;CL:0000791!2.09e-09!9;CL:0000789!2.09e-09!9;CL:0002420!2.09e-09!9;CL:0002419!2.09e-09!9;CL:0000790!2.09e-09!9;CL:0000738!1.44e-08!17;CL:0002087!1.44e-08!17;CL:0000624!1.93e-08!8;CL:0000219!7.89e-08!54|ontology_enrichment_celltype_v019_2=CL:0000988,1.02e-30,32;CL:0002032,1.02e-30,32;CL:0000037,1.02e-30,32;CL:0000837,1.02e-30,32;CL:0002031,5.98e-24,25;CL:0002320,6.17e-24,46;CL:0000134,6.17e-24,46;CL:0000838,4.58e-22,12;CL:0000542,3.53e-20,13;CL:0000051,3.53e-20,13;CL:0000084,1.00e-19,11;CL:0000827,1.00e-19,11;CL:0000219,1.58e-19,54;CL:0000738,1.25e-17,17;CL:0002087,1.25e-17,17;CL:0000791,3.46e-16,9;CL:0000789,3.46e-16,9;CL:0002420,3.46e-16,9;CL:0002419,3.46e-16,9;CL:0000790,3.46e-16,9;CL:0000034,2.92e-15,97;CL:0000624,5.47e-14,8;CL:0000723,1.18e-12,91;CL:0000048,1.18e-12,91;CL:0000049,1.29e-12,19;CL:0000553,3.31e-10,6;CL:0000556,3.31e-10,6;CL:0000893,1.32e-09,6;CL:0002489,1.32e-09,6;CL:0000898,1.32e-09,6;CL:0000809,1.32e-09,6;CL:0000810,1.32e-09,6;CL:0000895,1.32e-09,6;CL:0000808,1.32e-09,6;CL:0000894,1.32e-09,6;CL:0000806,1.32e-09,6;CL:0000807,1.32e-09,6;CL:0000805,1.32e-09,6;CL:0002425,1.32e-09,6;CL:0002436,1.32e-09,6;CL:0002427,1.32e-09,6;CL:0002428,1.32e-09,6;CL:0002429,1.32e-09,6;CL:0002433,1.32e-09,6;CL:0002431,1.32e-09,6;CL:0002432,1.32e-09,6;CL:0000763,3.95e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3|ontology_enrichment_uberon=UBERON:0002193!2.35e-13!48;UBERON:0002390!9.07e-12!45;UBERON:0003061!9.07e-12!45;UBERON:0002405!1.27e-10!70;UBERON:0002384!4.40e-10!46;UBERON:0002370!2.73e-09!23;UBERON:0000974!2.73e-09!23;UBERON:0004807!2.73e-09!23;UBERON:0005058!2.73e-09!23;UBERON:0003351!2.73e-09!23;UBERON:0009113!2.73e-09!23;UBERON:0003295!2.73e-09!23;UBERON:0009722!2.73e-09!23;UBERON:0005562!2.73e-09!23;UBERON:0007690!2.73e-09!23;UBERON:0003081!4.16e-09!88;UBERON:0004177!4.44e-09!29;UBERON:0006562!1.18e-08!24;UBERON:0003408!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0000065!8.83e-08!41;UBERON:0001004!2.07e-07!42;UBERON:0000072!4.76e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.17e-24,46;UBERON:0002193,5.32e-14,48;UBERON:0002405,5.32e-14,48;UBERON:0002390,1.13e-13,45;UBERON:0003061,1.13e-13,45;UBERON:0002371,3.95e-08,16;UBERON:0002370,9.81e-08,23;UBERON:0000974,9.81e-08,23;UBERON:0004807,9.81e-08,23;UBERON:0005058,9.81e-08,23;UBERON:0003351,9.81e-08,23;UBERON:0009113,9.81e-08,23;UBERON:0003295,9.81e-08,23;UBERON:0009722,9.81e-08,23;UBERON:0005562,9.81e-08,23;UBERON:0007690,9.81e-08,23;UBERON:0006562,2.46e-07,24;UBERON:0003408,2.46e-07,24;UBERON:0001557,2.46e-07,24;UBERON:0001042,2.46e-07,24;UBERON:0008814,2.46e-07,24;UBERON:0009145,2.46e-07,24;UBERON:0004177,5.65e-07,29;UBERON:0005057,5.65e-07,29|phase1_expression=0,0,0,0,0,0,0,58.2346188721509,1.54867594366833,2.10658073689794,1.02730780935303,0.797721589953364,16.9488722631894,18.3582845079895,1.99865857089398,4.85940641735582,0,12.6184866143295,10.4206969540361,8.06340338416257,0,2.08510997521859,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,5.4409111995798,2.3440060335714,2.09409497589519,261.763012173801,9.56263678941824,3.88408282424923,0,0,0,0,0,0,0,0,0,17.7849562421201,5.80289713609076,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,1.15945795480671,5.16254326188832,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,2.63593273913025,5.99902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,1.40442637462647,1.54408744268829,0.852490498186778,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.983179888294428,0.345369963731791,0.578596234326046,1.50791283939272,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0.512612642393558,0,0,0,0.27338845544205,1.14389086603261,4.41943917984024,8.6769900440668,3.17859939750175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0,0.358053391334963,0.39736270956253,1.08175904567972,1.32920574457119,0.706765149637033,0.914481679859998,0.705783295957884,0.38983152295901,1.44317762460494,1.98690733708667,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0,0,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p@chr8:86272827..86272852,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:86272827..86272852,+ | |||
|id=chr8:86272827..86272852,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.77e-14!32;CL:0002032!2.77e-14!32;CL:0000037!2.77e-14!32;CL:0000566!2.77e-14!32;CL:0000837!2.77e-14!32;CL:0000838!6.08e-12!12;CL:0000084!6.39e-11!11;CL:0000827!6.39e-11!11;CL:0000542!1.15e-10!13;CL:0000051!1.15e-10!13;CL:0002031!1.59e-10!25;CL:0002320!4.40e-10!46;CL:0000134!4.40e-10!46;CL:0000791!2.09e-09!9;CL:0000789!2.09e-09!9;CL:0002420!2.09e-09!9;CL:0002419!2.09e-09!9;CL:0000790!2.09e-09!9;CL:0000738!1.44e-08!17;CL:0002087!1.44e-08!17;CL:0000624!1.93e-08!8;CL:0000219!7.89e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.02e-30,32;CL:0002032,1.02e-30,32;CL:0000037,1.02e-30,32;CL:0000837,1.02e-30,32;CL:0002031,5.98e-24,25;CL:0002320,6.17e-24,46;CL:0000134,6.17e-24,46;CL:0000838,4.58e-22,12;CL:0000542,3.53e-20,13;CL:0000051,3.53e-20,13;CL:0000084,1.00e-19,11;CL:0000827,1.00e-19,11;CL:0000219,1.58e-19,54;CL:0000738,1.25e-17,17;CL:0002087,1.25e-17,17;CL:0000791,3.46e-16,9;CL:0000789,3.46e-16,9;CL:0002420,3.46e-16,9;CL:0002419,3.46e-16,9;CL:0000790,3.46e-16,9;CL:0000034,2.92e-15,97;CL:0000624,5.47e-14,8;CL:0000723,1.18e-12,91;CL:0000048,1.18e-12,91;CL:0000049,1.29e-12,19;CL:0000553,3.31e-10,6;CL:0000556,3.31e-10,6;CL:0000893,1.32e-09,6;CL:0002489,1.32e-09,6;CL:0000898,1.32e-09,6;CL:0000809,1.32e-09,6;CL:0000810,1.32e-09,6;CL:0000895,1.32e-09,6;CL:0000808,1.32e-09,6;CL:0000894,1.32e-09,6;CL:0000806,1.32e-09,6;CL:0000807,1.32e-09,6;CL:0000805,1.32e-09,6;CL:0002425,1.32e-09,6;CL:0002436,1.32e-09,6;CL:0002427,1.32e-09,6;CL:0002428,1.32e-09,6;CL:0002429,1.32e-09,6;CL:0002433,1.32e-09,6;CL:0002431,1.32e-09,6;CL:0002432,1.32e-09,6;CL:0000763,3.95e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.35e-13!48;UBERON:0002390!9.07e-12!45;UBERON:0003061!9.07e-12!45;UBERON:0002405!1.27e-10!70;UBERON:0002384!4.40e-10!46;UBERON:0002370!2.73e-09!23;UBERON:0000974!2.73e-09!23;UBERON:0004807!2.73e-09!23;UBERON:0005058!2.73e-09!23;UBERON:0003351!2.73e-09!23;UBERON:0009113!2.73e-09!23;UBERON:0003295!2.73e-09!23;UBERON:0009722!2.73e-09!23;UBERON:0005562!2.73e-09!23;UBERON:0007690!2.73e-09!23;UBERON:0003081!4.16e-09!88;UBERON:0004177!4.44e-09!29;UBERON:0006562!1.18e-08!24;UBERON:0003408!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0000065!8.83e-08!41;UBERON:0001004!2.07e-07!42;UBERON:0000072!4.76e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.17e-24,46;UBERON:0002193,5.32e-14,48;UBERON:0002405,5.32e-14,48;UBERON:0002390,1.13e-13,45;UBERON:0003061,1.13e-13,45;UBERON:0002371,3.95e-08,16;UBERON:0002370,9.81e-08,23;UBERON:0000974,9.81e-08,23;UBERON:0004807,9.81e-08,23;UBERON:0005058,9.81e-08,23;UBERON:0003351,9.81e-08,23;UBERON:0009113,9.81e-08,23;UBERON:0003295,9.81e-08,23;UBERON:0009722,9.81e-08,23;UBERON:0005562,9.81e-08,23;UBERON:0007690,9.81e-08,23;UBERON:0006562,2.46e-07,24;UBERON:0003408,2.46e-07,24;UBERON:0001557,2.46e-07,24;UBERON:0001042,2.46e-07,24;UBERON:0008814,2.46e-07,24;UBERON:0009145,2.46e-07,24;UBERON:0004177,5.65e-07,29;UBERON:0005057,5.65e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,58.2346188721509,1.54867594366833,2.10658073689794,1.02730780935303,0.797721589953364,16.9488722631894,18.3582845079895,1.99865857089398,4.85940641735582,0,12.6184866143295,10.4206969540361,8.06340338416257,0,2.08510997521859,1.04479915655574,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,5.4409111995798,2.3440060335714,2.09409497589519,261.763012173801,9.56263678941824,3.88408282424923,0,0,0,0,0,0,0,0,0,17.7849562421201,5.80289713609076,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,1.15945795480671,5.16254326188832,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,2.63593273913025,5.99902730993408,1.14363204365758,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,1.40442637462647,1.54408744268829,0.852490498186778,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.983179888294428,0.345369963731791,0.578596234326046,1.50791283939272,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0.512612642393558,0,0,0,0.27338845544205,1.14389086603261,4.41943917984024,8.6769900440668,3.17859939750175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0,0.358053391334963,0.39736270956253,1.08175904567972,1.32920574457119,0.706765149637033,0.914481679859998,0.705783295957884,0.38983152295901,1.44317762460494,1.98690733708667,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0,0,0,0.188218760830661,0.0846146078916765,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr8:86272827..86272852,+ | |||
}} |
Revision as of 16:13, 14 September 2013
Short description: | p@chr8:86272827..86272852, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86272827..86272852, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.17e-24 | 46 |
hemolymphoid system | 5.32e-14 | 48 |
immune system | 5.32e-14 | 48 |
hematopoietic system | 1.13e-13 | 45 |
blood island | 1.13e-13 | 45 |
bone marrow | 3.95e-08 | 16 |
thymus | 9.81e-08 | 23 |
neck | 9.81e-08 | 23 |
respiratory system epithelium | 9.81e-08 | 23 |
hemolymphoid system gland | 9.81e-08 | 23 |
pharyngeal epithelium | 9.81e-08 | 23 |
thymic region | 9.81e-08 | 23 |
pharyngeal gland | 9.81e-08 | 23 |
entire pharyngeal arch endoderm | 9.81e-08 | 23 |
thymus primordium | 9.81e-08 | 23 |
early pharyngeal endoderm | 9.81e-08 | 23 |
pharynx | 2.46e-07 | 24 |
gland of gut | 2.46e-07 | 24 |
upper respiratory tract | 2.46e-07 | 24 |
chordate pharynx | 2.46e-07 | 24 |
pharyngeal arch system | 2.46e-07 | 24 |
pharyngeal region of foregut | 2.46e-07 | 24 |
hemopoietic organ | 5.65e-07 | 29 |
immune organ | 5.65e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.31e-07 | 3 |
muscle cancer | 1.31e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.