FFCP PHASE1:Mm9::chr8:87296263..87296314,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=731|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:87296263..87296314,-|id=chr8:87296263..87296314,-|ontology_enrichment_celltype=CL:0000117!3.37e-10!23;CL:0000337!3.37e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-09,23;CL:0000337,2.38e-09,23;CL:0002319,2.52e-09,43;CL:0000221,5.59e-09,44;CL:0000133,5.59e-09,44;CL:0002609,1.30e-08,6;CL:0002453,9.50e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.00e-21!34;UBERON:0001049!1.57e-21!52;UBERON:0005068!1.57e-21!52;UBERON:0006241!1.57e-21!52;UBERON:0007135!1.57e-21!52;UBERON:0002791!3.58e-20!29;UBERON:0003528!3.58e-20!29;UBERON:0001893!3.58e-20!29;UBERON:0000955!6.12e-20!50;UBERON:0006238!6.12e-20!50;UBERON:0001017!2.27e-19!73;UBERON:0005743!2.27e-19!73;UBERON:0002616!3.02e-19!49;UBERON:0000073!3.61e-18!75;UBERON:0001016!3.61e-18!75;UBERON:0000956!3.98e-17!21;UBERON:0001869!3.98e-17!21;UBERON:0000203!3.98e-17!21;UBERON:0003080!6.19e-17!40;UBERON:0002780!1.73e-16!39;UBERON:0001890!1.73e-16!39;UBERON:0006240!1.73e-16!39;UBERON:0000033!1.82e-16!63;UBERON:0004121!1.36e-14!102;UBERON:0000924!1.36e-14!102;UBERON:0006601!1.36e-14!102;UBERON:0002619!4.06e-14!17;UBERON:0003056!4.68e-14!49;UBERON:0002346!1.90e-13!71;UBERON:0003075!1.90e-13!71;UBERON:0007284!1.90e-13!71;UBERON:0002021!2.78e-09!10;UBERON:0000411!2.78e-09!10;UBERON:0001950!2.78e-09!10;UBERON:0000153!1.18e-08!94;UBERON:0007811!3.44e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.72e-30,73;UBERON:0003528,8.78e-30,29;UBERON:0002791,8.78e-30,29;UBERON:0001893,8.78e-30,29;UBERON:0000956,1.22e-29,21;UBERON:0001869,1.22e-29,21;UBERON:0000203,1.22e-29,21;UBERON:0000955,1.47e-29,47;UBERON:0006238,1.47e-29,47;UBERON:0001049,5.47e-29,52;UBERON:0005068,5.47e-29,52;UBERON:0006241,5.47e-29,52;UBERON:0007135,5.47e-29,52;UBERON:0001016,6.95e-29,75;UBERON:0002020,2.31e-28,34;UBERON:0002616,2.36e-28,46;UBERON:0000073,1.23e-27,54;UBERON:0002619,3.38e-24,17;UBERON:0003080,5.99e-24,40;UBERON:0002780,3.62e-23,39;UBERON:0001890,3.62e-23,39;UBERON:0006240,3.62e-23,39;UBERON:0002346,2.17e-21,64;UBERON:0003075,2.17e-21,64;UBERON:0007284,2.17e-21,64;UBERON:0004121,6.03e-20,95;UBERON:0000924,6.03e-20,95;UBERON:0006601,6.03e-20,95;UBERON:0003056,7.60e-18,49;UBERON:0010371,2.30e-17,73;UBERON:0002021,1.80e-15,10;UBERON:0000411,1.80e-15,10;UBERON:0001950,1.80e-15,10;UBERON:0010314,1.54e-11,92;UBERON:0001954,4.34e-10,7;UBERON:0003022,4.34e-10,7;UBERON:0002421,4.34e-10,7;UBERON:0000349,4.34e-10,7;UBERON:0002600,4.34e-10,7;UBERON:0000025,2.28e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.18025156380447,8.12838876117546,4.6663175777828,2.37976916763116,4.31257693094915,0,0,0,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0.677689064138264,0,0,0,0,1.79760066311043,1.53687322128622,7.46565208621039,8.77538599155989,9.04397333810943,1.71390590642282,0.441737081903227,1.71487118900936,2.49198224647415,4.5960939330501,0,2.17068474744819,0.768032666281217,0.659431438650969,1.00636407962651,0.52091337055676,0.837548997004143,2.25105044012672,1.37518422999129,0.589257170947335,0.569486723196412,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0.578397427679647,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,8.49064311333487,6.49284791121711,0.255457055208591,0,0,0,1.19832511523858,1.83000241127451,2.26177833803156,9.90798625095976,9.97290283588289,1.87009240103604,0.811206315338788,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0.834141747676794,4.52727816478817,2.26360350048738,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0,11.9865270681553,31.3859067756818,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,0.664394068946325,0.318909537314974,0.655453258862952,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,1.12385412991454,1.52375192569864,0.491804836130026,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.425820255624806,0.178065603667255,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.356737635204141,0.493647061806363,0,0,0,0.220528398054962,0.65954501176592,0,0.422190474497091,0.238744688006273,0.328281799490123,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0.414599921413271,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,1.04702376793612,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.857473516316263,0,16.942555278512,17.9526842237799,13.7494923225455,18.5601436931183,8.90607275701835,11.3309084608455,16.2005400055633,11.2580300806055,7.25027854374727,12.9440077937955,0,0,0.170733605754134,0.729320151204882,0.628839487883947,1.47074806760011,1.11123363900808,1.85431551515005,0.64183841918363,1.26348605881899,0.760437899670719,1.69763707247469,1.591905626988,1.47257850531199,1.37845125493472,1.90517476513229,1.15884325944855,1.54327376370964,0.824171801606613,1.03039244094078,0,0.70990322463735,0.715308569841963,1.0174249164263,0.846984423737976,0.761531471025089,1.46342378298218,0.526139422875686,2.03706170768793,0.561142271657738,1.06771516311757,0.985044823755635,1.22769312950907,1.39443157067369,2.3148793317737,2.99772693525535,0.935726433781634,2.14871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr8:87296263..87296314,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=731 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:87296263..87296314,- | |||
|id=chr8:87296263..87296314,- | |||
|ontology_enrichment_celltype=CL:0000117!3.37e-10!23;CL:0000337!3.37e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-09,23;CL:0000337,2.38e-09,23;CL:0002319,2.52e-09,43;CL:0000221,5.59e-09,44;CL:0000133,5.59e-09,44;CL:0002609,1.30e-08,6;CL:0002453,9.50e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.00e-21!34;UBERON:0001049!1.57e-21!52;UBERON:0005068!1.57e-21!52;UBERON:0006241!1.57e-21!52;UBERON:0007135!1.57e-21!52;UBERON:0002791!3.58e-20!29;UBERON:0003528!3.58e-20!29;UBERON:0001893!3.58e-20!29;UBERON:0000955!6.12e-20!50;UBERON:0006238!6.12e-20!50;UBERON:0001017!2.27e-19!73;UBERON:0005743!2.27e-19!73;UBERON:0002616!3.02e-19!49;UBERON:0000073!3.61e-18!75;UBERON:0001016!3.61e-18!75;UBERON:0000956!3.98e-17!21;UBERON:0001869!3.98e-17!21;UBERON:0000203!3.98e-17!21;UBERON:0003080!6.19e-17!40;UBERON:0002780!1.73e-16!39;UBERON:0001890!1.73e-16!39;UBERON:0006240!1.73e-16!39;UBERON:0000033!1.82e-16!63;UBERON:0004121!1.36e-14!102;UBERON:0000924!1.36e-14!102;UBERON:0006601!1.36e-14!102;UBERON:0002619!4.06e-14!17;UBERON:0003056!4.68e-14!49;UBERON:0002346!1.90e-13!71;UBERON:0003075!1.90e-13!71;UBERON:0007284!1.90e-13!71;UBERON:0002021!2.78e-09!10;UBERON:0000411!2.78e-09!10;UBERON:0001950!2.78e-09!10;UBERON:0000153!1.18e-08!94;UBERON:0007811!3.44e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.72e-30,73;UBERON:0003528,8.78e-30,29;UBERON:0002791,8.78e-30,29;UBERON:0001893,8.78e-30,29;UBERON:0000956,1.22e-29,21;UBERON:0001869,1.22e-29,21;UBERON:0000203,1.22e-29,21;UBERON:0000955,1.47e-29,47;UBERON:0006238,1.47e-29,47;UBERON:0001049,5.47e-29,52;UBERON:0005068,5.47e-29,52;UBERON:0006241,5.47e-29,52;UBERON:0007135,5.47e-29,52;UBERON:0001016,6.95e-29,75;UBERON:0002020,2.31e-28,34;UBERON:0002616,2.36e-28,46;UBERON:0000073,1.23e-27,54;UBERON:0002619,3.38e-24,17;UBERON:0003080,5.99e-24,40;UBERON:0002780,3.62e-23,39;UBERON:0001890,3.62e-23,39;UBERON:0006240,3.62e-23,39;UBERON:0002346,2.17e-21,64;UBERON:0003075,2.17e-21,64;UBERON:0007284,2.17e-21,64;UBERON:0004121,6.03e-20,95;UBERON:0000924,6.03e-20,95;UBERON:0006601,6.03e-20,95;UBERON:0003056,7.60e-18,49;UBERON:0010371,2.30e-17,73;UBERON:0002021,1.80e-15,10;UBERON:0000411,1.80e-15,10;UBERON:0001950,1.80e-15,10;UBERON:0010314,1.54e-11,92;UBERON:0001954,4.34e-10,7;UBERON:0003022,4.34e-10,7;UBERON:0002421,4.34e-10,7;UBERON:0000349,4.34e-10,7;UBERON:0002600,4.34e-10,7;UBERON:0000025,2.28e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.18025156380447,8.12838876117546,4.6663175777828,2.37976916763116,4.31257693094915,0,0,0,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0.677689064138264,0,0,0,0,1.79760066311043,1.53687322128622,7.46565208621039,8.77538599155989,9.04397333810943,1.71390590642282,0.441737081903227,1.71487118900936,2.49198224647415,4.5960939330501,0,2.17068474744819,0.768032666281217,0.659431438650969,1.00636407962651,0.52091337055676,0.837548997004143,2.25105044012672,1.37518422999129,0.589257170947335,0.569486723196412,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0.578397427679647,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,8.49064311333487,6.49284791121711,0.255457055208591,0,0,0,1.19832511523858,1.83000241127451,2.26177833803156,9.90798625095976,9.97290283588289,1.87009240103604,0.811206315338788,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0.834141747676794,4.52727816478817,2.26360350048738,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0,11.9865270681553,31.3859067756818,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,0.664394068946325,0.318909537314974,0.655453258862952,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,1.12385412991454,1.52375192569864,0.491804836130026,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.425820255624806,0.178065603667255,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.356737635204141,0.493647061806363,0,0,0,0.220528398054962,0.65954501176592,0,0.422190474497091,0.238744688006273,0.328281799490123,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0.414599921413271,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,1.04702376793612,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.857473516316263,0,16.942555278512,17.9526842237799,13.7494923225455,18.5601436931183,8.90607275701835,11.3309084608455,16.2005400055633,11.2580300806055,7.25027854374727,12.9440077937955,0,0,0.170733605754134,0.729320151204882,0.628839487883947,1.47074806760011,1.11123363900808,1.85431551515005,0.64183841918363,1.26348605881899,0.760437899670719,1.69763707247469,1.591905626988,1.47257850531199,1.37845125493472,1.90517476513229,1.15884325944855,1.54327376370964,0.824171801606613,1.03039244094078,0,0.70990322463735,0.715308569841963,1.0174249164263,0.846984423737976,0.761531471025089,1.46342378298218,0.526139422875686,2.03706170768793,0.561142271657738,1.06771516311757,0.985044823755635,1.22769312950907,1.39443157067369,2.3148793317737,2.99772693525535,0.935726433781634,2.14871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr8:87296263..87296314,- | |||
}} |
Revision as of 16:18, 14 September 2013
Short description: | p@chr8:87296263..87296314, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:87296263..87296314, - |
Coexpression cluster: | MCL_coexpression_mm9:731 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-09 | 23 |
neural cell | 2.52e-09 | 43 |
ectodermal cell | 5.59e-09 | 44 |
neurectodermal cell | 5.59e-09 | 44 |
neuron of cerebral cortex | 1.30e-08 | 6 |
oligodendrocyte precursor cell | 9.50e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.