FFCP PHASE1:Mm9::chr9:44290614..44290635,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=288|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:44290614..44290635,+|id=chr9:44290614..44290635,+|ontology_enrichment_celltype=CL:0000117!2.02e-09!23;CL:0000337!2.02e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0002609,6.02e-09,6;CL:0000540,7.30e-08,33;CL:0000047,7.30e-08,33;CL:0000031,7.30e-08,33;CL:0000404,7.30e-08,33;CL:0002608,8.24e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.81e-16!34;UBERON:0002791!4.43e-14!29;UBERON:0003528!4.43e-14!29;UBERON:0001893!4.43e-14!29;UBERON:0000956!1.30e-12!21;UBERON:0001869!1.30e-12!21;UBERON:0000203!1.30e-12!21;UBERON:0001049!1.68e-12!52;UBERON:0005068!1.68e-12!52;UBERON:0006241!1.68e-12!52;UBERON:0007135!1.68e-12!52;UBERON:0000955!9.02e-12!50;UBERON:0006238!9.02e-12!50;UBERON:0003080!1.66e-11!40;UBERON:0002616!2.98e-11!49;UBERON:0002780!4.54e-11!39;UBERON:0001890!4.54e-11!39;UBERON:0006240!4.54e-11!39;UBERON:0002619!2.17e-10!17;UBERON:0001017!2.77e-09!73;UBERON:0005743!2.77e-09!73;UBERON:0000033!3.48e-09!63;UBERON:0000073!7.30e-09!75;UBERON:0001016!7.30e-09!75;UBERON:0002021!3.82e-08!10;UBERON:0000411!3.82e-08!10;UBERON:0001950!3.82e-08!10;UBERON:0003056!4.76e-08!49;UBERON:0007811!2.48e-07!86;UBERON:0000153!3.51e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.75e-34,34;UBERON:0003528,1.04e-31,29;UBERON:0002791,1.04e-31,29;UBERON:0001893,1.04e-31,29;UBERON:0000956,1.48e-29,21;UBERON:0001869,1.48e-29,21;UBERON:0000203,1.48e-29,21;UBERON:0002780,6.36e-27,39;UBERON:0001890,6.36e-27,39;UBERON:0006240,6.36e-27,39;UBERON:0003080,4.29e-26,40;UBERON:0002619,4.35e-26,17;UBERON:0000073,4.24e-25,54;UBERON:0001049,2.27e-24,52;UBERON:0005068,2.27e-24,52;UBERON:0006241,2.27e-24,52;UBERON:0007135,2.27e-24,52;UBERON:0000955,3.22e-23,47;UBERON:0006238,3.22e-23,47;UBERON:0002616,7.00e-22,46;UBERON:0001017,2.29e-21,73;UBERON:0001016,1.35e-20,75;UBERON:0003056,3.66e-20,49;UBERON:0002021,6.24e-20,10;UBERON:0000411,6.24e-20,10;UBERON:0001950,6.24e-20,10;UBERON:0002346,1.60e-18,64;UBERON:0003075,1.60e-18,64;UBERON:0007284,1.60e-18,64;UBERON:0010371,3.73e-18,73;UBERON:0004121,4.23e-17,95;UBERON:0000924,4.23e-17,95;UBERON:0006601,4.23e-17,95;UBERON:0010314,7.48e-11,92;UBERON:0001954,4.37e-08,7;UBERON:0003022,4.37e-08,7;UBERON:0002421,4.37e-08,7;UBERON:0000349,4.37e-08,7;UBERON:0002600,4.37e-08,7;UBERON:0000369,1.40e-07,5;UBERON:0002435,1.40e-07,5;UBERON:0000204,1.40e-07,5;UBERON:0010082,1.40e-07,5;UBERON:0000025,1.63e-07,114|phase1_expression=0.320297694209588,0,0,0.60492842261366,1.00179145989269,0.503637815735669,0.467225281191051,0.516493293766305,4.92760527530834,6.31974221069382,0,0,0.342401459862411,0.0874204024189974,0,0,0,0.630924330716475,0.274228867211478,0.84877930359606,0.510259740906419,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,1.4850653216486,0.630974884054146,0.285650984403804,1.98781686856452,4.89963196859816,4.12135525378416,3.67687514644008,1.10115880999389,0.255374676170375,0.307213066512487,1.71452174049252,1.55528994124096,0.52091337055676,0,0,0.61119299110724,1.47314292736834,1.56608848879013,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.852151612890289,0,0,0,0,0,7.11066703153331,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.748953197024114,12.8100168789215,19.6020789296068,2.78118912307642,3.58001640262463,2.28566849015516,2.75810147215188,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0,0.452114453507145,0,0,0,0,0,0,0.527853372491847,0,0.278047249225598,0.348252166522167,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,2.3131894342054,2.46971069710283,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.220528398054962,1.31909002353184,0.161464426695906,1.08563264870681,0.238744688006273,0.656563598980245,0,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.432021363287205,0.627264888043406,0.436725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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=288 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:44290614..44290635,+ | |||
|id=chr9:44290614..44290635,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.02e-09!23;CL:0000337!2.02e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0002609,6.02e-09,6;CL:0000540,7.30e-08,33;CL:0000047,7.30e-08,33;CL:0000031,7.30e-08,33;CL:0000404,7.30e-08,33;CL:0002608,8.24e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.81e-16!34;UBERON:0002791!4.43e-14!29;UBERON:0003528!4.43e-14!29;UBERON:0001893!4.43e-14!29;UBERON:0000956!1.30e-12!21;UBERON:0001869!1.30e-12!21;UBERON:0000203!1.30e-12!21;UBERON:0001049!1.68e-12!52;UBERON:0005068!1.68e-12!52;UBERON:0006241!1.68e-12!52;UBERON:0007135!1.68e-12!52;UBERON:0000955!9.02e-12!50;UBERON:0006238!9.02e-12!50;UBERON:0003080!1.66e-11!40;UBERON:0002616!2.98e-11!49;UBERON:0002780!4.54e-11!39;UBERON:0001890!4.54e-11!39;UBERON:0006240!4.54e-11!39;UBERON:0002619!2.17e-10!17;UBERON:0001017!2.77e-09!73;UBERON:0005743!2.77e-09!73;UBERON:0000033!3.48e-09!63;UBERON:0000073!7.30e-09!75;UBERON:0001016!7.30e-09!75;UBERON:0002021!3.82e-08!10;UBERON:0000411!3.82e-08!10;UBERON:0001950!3.82e-08!10;UBERON:0003056!4.76e-08!49;UBERON:0007811!2.48e-07!86;UBERON:0000153!3.51e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.75e-34,34;UBERON:0003528,1.04e-31,29;UBERON:0002791,1.04e-31,29;UBERON:0001893,1.04e-31,29;UBERON:0000956,1.48e-29,21;UBERON:0001869,1.48e-29,21;UBERON:0000203,1.48e-29,21;UBERON:0002780,6.36e-27,39;UBERON:0001890,6.36e-27,39;UBERON:0006240,6.36e-27,39;UBERON:0003080,4.29e-26,40;UBERON:0002619,4.35e-26,17;UBERON:0000073,4.24e-25,54;UBERON:0001049,2.27e-24,52;UBERON:0005068,2.27e-24,52;UBERON:0006241,2.27e-24,52;UBERON:0007135,2.27e-24,52;UBERON:0000955,3.22e-23,47;UBERON:0006238,3.22e-23,47;UBERON:0002616,7.00e-22,46;UBERON:0001017,2.29e-21,73;UBERON:0001016,1.35e-20,75;UBERON:0003056,3.66e-20,49;UBERON:0002021,6.24e-20,10;UBERON:0000411,6.24e-20,10;UBERON:0001950,6.24e-20,10;UBERON:0002346,1.60e-18,64;UBERON:0003075,1.60e-18,64;UBERON:0007284,1.60e-18,64;UBERON:0010371,3.73e-18,73;UBERON:0004121,4.23e-17,95;UBERON:0000924,4.23e-17,95;UBERON:0006601,4.23e-17,95;UBERON:0010314,7.48e-11,92;UBERON:0001954,4.37e-08,7;UBERON:0003022,4.37e-08,7;UBERON:0002421,4.37e-08,7;UBERON:0000349,4.37e-08,7;UBERON:0002600,4.37e-08,7;UBERON:0000369,1.40e-07,5;UBERON:0002435,1.40e-07,5;UBERON:0000204,1.40e-07,5;UBERON:0010082,1.40e-07,5;UBERON:0000025,1.63e-07,114 | |||
|phase1_expression=0.320297694209588,0,0,0.60492842261366,1.00179145989269,0.503637815735669,0.467225281191051,0.516493293766305,4.92760527530834,6.31974221069382,0,0,0.342401459862411,0.0874204024189974,0,0,0,0.630924330716475,0.274228867211478,0.84877930359606,0.510259740906419,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,1.4850653216486,0.630974884054146,0.285650984403804,1.98781686856452,4.89963196859816,4.12135525378416,3.67687514644008,1.10115880999389,0.255374676170375,0.307213066512487,1.71452174049252,1.55528994124096,0.52091337055676,0,0,0.61119299110724,1.47314292736834,1.56608848879013,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.852151612890289,0,0,0,0,0,7.11066703153331,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.748953197024114,12.8100168789215,19.6020789296068,2.78118912307642,3.58001640262463,2.28566849015516,2.75810147215188,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0,0.452114453507145,0,0,0,0,0,0,0.527853372491847,0,0.278047249225598,0.348252166522167,1.64625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,2.3131894342054,2.46971069710283,0,0.264450566663544,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.220528398054962,1.31909002353184,0.161464426695906,1.08563264870681,0.238744688006273,0.656563598980245,0,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0,0.432021363287205,0.627264888043406,0.436725127492355,0.134864346384821,0.247960367176008,0.26175594198403,0,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,0.906921534460845,0.221985953374065,0.0897138566094757,0.671538465456314,0.386379188064381,0,0.36630324853453,0.428736758158132,0.501572104035363,5.0827665835536,3.68260189205742,4.01026859407578,2.92150409984269,1.37016503954128,1.5107877947794,3.37511250115903,1.35096360967266,3.62513927187364,1.03552062350364,0,0,0.512200817262403,0,0.838452650511929,0.735374033800057,0.44449345560323,0.618105171716683,0,0.505394423527595,1.01391719956096,0.565879024158229,0.37456602987953,0.832326981263301,1.09127391015665,1.42888107384922,0.579421629724277,0.77163688185482,0.824171801606613,0.883193520806384,0.685738504770831,0,0.238436189947321,0.436039249896986,0.470546902076653,0.930760686808441,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.474540072496697,1.0835493061312,0.409231043169689,0.619747364743864,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr9:44290614..44290635,+ | |||
}} |
Revision as of 17:56, 14 September 2013
Short description: | p@chr9:44290614..44290635, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44290614..44290635, + |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-12 | 23 |
neuron of cerebral cortex | 6.02e-09 | 6 |
neuron | 7.30e-08 | 33 |
neuronal stem cell | 7.30e-08 | 33 |
neuroblast | 7.30e-08 | 33 |
electrically signaling cell | 7.30e-08 | 33 |
hippocampal neuron | 8.24e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.