FFCP PHASE1:Mm9::chr9:62257059..62257102,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=484|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:62257059..62257102,+|id=chr9:62257059..62257102,+|ontology_enrichment_celltype=CL:0000063!2.65e-10!66;CL:0000988!5.05e-09!32;CL:0002032!5.05e-09!32;CL:0000037!5.05e-09!32;CL:0000566!5.05e-09!32;CL:0000837!5.05e-09!32;CL:0000144!7.80e-09!121;CL:0000012!7.80e-09!121;CL:0002371!7.03e-08!118;CL:0000838!9.69e-08!12;CL:0002031!2.87e-07!25;CL:0000738!3.80e-07!17;CL:0002087!3.80e-07!17;CL:0000084!4.70e-07!11;CL:0000827!4.70e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,9.89e-20,32;CL:0002032,9.89e-20,32;CL:0000037,9.89e-20,32;CL:0000837,9.89e-20,32;CL:0002320,9.25e-17,46;CL:0000134,9.25e-17,46;CL:0002031,5.66e-16,25;CL:0000219,1.04e-15,54;CL:0000838,9.69e-14,12;CL:0000738,3.28e-13,17;CL:0002087,3.28e-13,17;CL:0000791,1.55e-12,9;CL:0000789,1.55e-12,9;CL:0002420,1.55e-12,9;CL:0002419,1.55e-12,9;CL:0000790,1.55e-12,9;CL:0000542,1.85e-12,13;CL:0000051,1.85e-12,13;CL:0000084,2.85e-12,11;CL:0000827,2.85e-12,11;CL:0000034,3.13e-11,97;CL:0000624,3.39e-11,8;CL:0000893,5.36e-09,6;CL:0002489,5.36e-09,6;CL:0000898,5.36e-09,6;CL:0000809,5.36e-09,6;CL:0000810,5.36e-09,6;CL:0000895,5.36e-09,6;CL:0000808,5.36e-09,6;CL:0000894,5.36e-09,6;CL:0000806,5.36e-09,6;CL:0000807,5.36e-09,6;CL:0000805,5.36e-09,6;CL:0002425,5.36e-09,6;CL:0002436,5.36e-09,6;CL:0002427,5.36e-09,6;CL:0002428,5.36e-09,6;CL:0002429,5.36e-09,6;CL:0002433,5.36e-09,6;CL:0002431,5.36e-09,6;CL:0002432,5.36e-09,6;CL:0000049,6.14e-09,19;CL:0000239,7.46e-09,6;CL:0000677,7.46e-09,6;CL:0000584,7.46e-09,6;CL:0000066,5.26e-08,25;CL:0002076,8.16e-08,15;CL:0000723,1.02e-07,91;CL:0000048,1.02e-07,91;CL:0000075,1.89e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.08e-08!15;UBERON:0001242!2.72e-07!13;UBERON:0000060!2.72e-07!13;UBERON:0001262!2.72e-07!13;UBERON:0004786!2.72e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.25e-17,46;UBERON:0000344,1.65e-10,15;UBERON:0001242,7.16e-08,13;UBERON:0001262,7.16e-08,13;UBERON:0004786,7.16e-08,13|phase1_expression=0.160148847104794,3.83872948403297,7.27998783023258,6.95667686005709,5.50985302940982,1.34303417529512,5.37309073369709,2.58246646883153,9.15126693985834,7.2560003159818,7.0199366972457,2.6324812468461,4.62241970814255,2.71003247498892,0,3.84703008040669,1.39912375625629,6.94016763788123,5.07323404341233,3.81950686618227,0.425216450755349,0.297872853602656,4.4403964153619,11.8394392867121,10.782236210157,3.44539178469012,3.4460959692726,3.23206849028834,13.8717096203153,1.76421090831952,3.10422714917427,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,4.60384793810598,7.813353445238,9.94695113550217,7.05877785637217,6.83045484958446,14.5653105909346,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,9.56360854529097,5.07753499407941,5.71359458542189,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,0.285650984403804,0,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.768032666281217,0,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,4.69502398665741,2.64500460373749,2.31891590961342,1.72084775396277,0,0,0,0,0.140444420131752,0,2.85764605063156,2.82671659608272,0.14084341977668,0,2.54805239706646,0,3.46385665617943,3.29367825117628,2.52762222507392,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,2.87556298814209,2.39961092397363,3.17675567682662,0,0.457500602818626,0.125654352112864,0.347648640384553,0,0.41557608911912,0,0.407357455401265,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,4.21327912387941,7.46308930632674,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,0.630869845692382,0.308713837137853,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0.898819408654221,1.08069024937347,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.327726629431476,0.345369963731791,0.433947175744535,10.5553898757491,20.1245103012923,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0.504941854408746,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0,0.493647061806363,0,0,1.69465656691056,0,0.49465875882444,0,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,2.54967644990783,1.6794174278839,1.93479963326193,0,0,0.406638934253697,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,0.648074866458964,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0.233753804363138,0.226730383615211,2.66383144048878,3.22969883794113,5.54019234001459,0,0.375364950902364,0,0.643105137237198,0,1.12950368523413,0.920650473014354,0,1.54667864109319,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421|short_description=p@chr9:62257059..62257102,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=484 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:62257059..62257102,+ | |||
|id=chr9:62257059..62257102,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.65e-10!66;CL:0000988!5.05e-09!32;CL:0002032!5.05e-09!32;CL:0000037!5.05e-09!32;CL:0000566!5.05e-09!32;CL:0000837!5.05e-09!32;CL:0000144!7.80e-09!121;CL:0000012!7.80e-09!121;CL:0002371!7.03e-08!118;CL:0000838!9.69e-08!12;CL:0002031!2.87e-07!25;CL:0000738!3.80e-07!17;CL:0002087!3.80e-07!17;CL:0000084!4.70e-07!11;CL:0000827!4.70e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.89e-20,32;CL:0002032,9.89e-20,32;CL:0000037,9.89e-20,32;CL:0000837,9.89e-20,32;CL:0002320,9.25e-17,46;CL:0000134,9.25e-17,46;CL:0002031,5.66e-16,25;CL:0000219,1.04e-15,54;CL:0000838,9.69e-14,12;CL:0000738,3.28e-13,17;CL:0002087,3.28e-13,17;CL:0000791,1.55e-12,9;CL:0000789,1.55e-12,9;CL:0002420,1.55e-12,9;CL:0002419,1.55e-12,9;CL:0000790,1.55e-12,9;CL:0000542,1.85e-12,13;CL:0000051,1.85e-12,13;CL:0000084,2.85e-12,11;CL:0000827,2.85e-12,11;CL:0000034,3.13e-11,97;CL:0000624,3.39e-11,8;CL:0000893,5.36e-09,6;CL:0002489,5.36e-09,6;CL:0000898,5.36e-09,6;CL:0000809,5.36e-09,6;CL:0000810,5.36e-09,6;CL:0000895,5.36e-09,6;CL:0000808,5.36e-09,6;CL:0000894,5.36e-09,6;CL:0000806,5.36e-09,6;CL:0000807,5.36e-09,6;CL:0000805,5.36e-09,6;CL:0002425,5.36e-09,6;CL:0002436,5.36e-09,6;CL:0002427,5.36e-09,6;CL:0002428,5.36e-09,6;CL:0002429,5.36e-09,6;CL:0002433,5.36e-09,6;CL:0002431,5.36e-09,6;CL:0002432,5.36e-09,6;CL:0000049,6.14e-09,19;CL:0000239,7.46e-09,6;CL:0000677,7.46e-09,6;CL:0000584,7.46e-09,6;CL:0000066,5.26e-08,25;CL:0002076,8.16e-08,15;CL:0000723,1.02e-07,91;CL:0000048,1.02e-07,91;CL:0000075,1.89e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.08e-08!15;UBERON:0001242!2.72e-07!13;UBERON:0000060!2.72e-07!13;UBERON:0001262!2.72e-07!13;UBERON:0004786!2.72e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.25e-17,46;UBERON:0000344,1.65e-10,15;UBERON:0001242,7.16e-08,13;UBERON:0001262,7.16e-08,13;UBERON:0004786,7.16e-08,13 | |||
|phase1_expression=0.160148847104794,3.83872948403297,7.27998783023258,6.95667686005709,5.50985302940982,1.34303417529512,5.37309073369709,2.58246646883153,9.15126693985834,7.2560003159818,7.0199366972457,2.6324812468461,4.62241970814255,2.71003247498892,0,3.84703008040669,1.39912375625629,6.94016763788123,5.07323404341233,3.81950686618227,0.425216450755349,0.297872853602656,4.4403964153619,11.8394392867121,10.782236210157,3.44539178469012,3.4460959692726,3.23206849028834,13.8717096203153,1.76421090831952,3.10422714917427,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,4.60384793810598,7.813353445238,9.94695113550217,7.05877785637217,6.83045484958446,14.5653105909346,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,9.56360854529097,5.07753499407941,5.71359458542189,0.257259436035947,0.573066879877513,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,0.285650984403804,0,0.244981598429908,0.191690942036473,0,1.10115880999389,0.510749352340751,0.768032666281217,0,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,4.69502398665741,2.64500460373749,2.31891590961342,1.72084775396277,0,0,0,0,0.140444420131752,0,2.85764605063156,2.82671659608272,0.14084341977668,0,2.54805239706646,0,3.46385665617943,3.29367825117628,2.52762222507392,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0,2.87556298814209,2.39961092397363,3.17675567682662,0,0.457500602818626,0.125654352112864,0.347648640384553,0,0.41557608911912,0,0.407357455401265,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,4.21327912387941,7.46308930632674,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,0.630869845692382,0.308713837137853,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0.898819408654221,1.08069024937347,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.327726629431476,0.345369963731791,0.433947175744535,10.5553898757491,20.1245103012923,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0.504941854408746,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.532020700926821,0,0.493647061806363,0,0,1.69465656691056,0,0.49465875882444,0,0.241251699712623,0.238744688006273,0.164140899745061,0.582961673259701,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,2.54967644990783,1.6794174278839,1.93479963326193,0,0,0.406638934253697,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0.523511883968059,0.648074866458964,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0.233753804363138,0.226730383615211,2.66383144048878,3.22969883794113,5.54019234001459,0,0.375364950902364,0,0.643105137237198,0,1.12950368523413,0.920650473014354,0,1.54667864109319,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr9:62257059..62257102,+ | |||
}} |
Revision as of 18:27, 14 September 2013
Short description: | p@chr9:62257059..62257102, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:62257059..62257102, + |
Coexpression cluster: | MCL_coexpression_mm9:484 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.25e-17 | 46 |
mucosa | 1.65e-10 | 15 |
intestinal mucosa | 7.16e-08 | 13 |
wall of intestine | 7.16e-08 | 13 |
gastrointestinal system mucosa | 7.16e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.