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FFCP PHASE1:Mm9::chrX:58962666..58962692,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=434784|HGNC=|UniProt=Q7TPY9|association_with_transcript=-96bp_to_ENSMUST00000075983_5end|description=CAGE_peak_2_at_Ldoc1_5end|id=chrX:58962666..58962692,+|ontology_enrichment_celltype=CL:0000117!1.43e-10!23;CL:0000337!1.43e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-14,23;CL:0000337,1.80e-14,23;CL:0000540,3.35e-09,33;CL:0000047,3.35e-09,33;CL:0000031,3.35e-09,33;CL:0000404,3.35e-09,33;CL:0002612,5.06e-08,3;CL:0002610,1.61e-07,3;CL:0002614,1.79e-07,3;CL:0000393,2.36e-07,39;CL:0000211,2.36e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.26e-15!71;UBERON:0003075!1.26e-15!71;UBERON:0007284!1.26e-15!71;UBERON:0001049!2.18e-14!52;UBERON:0005068!2.18e-14!52;UBERON:0006241!2.18e-14!52;UBERON:0007135!2.18e-14!52;UBERON:0004121!6.57e-13!102;UBERON:0000924!6.57e-13!102;UBERON:0006601!6.57e-13!102;UBERON:0000955!1.18e-12!50;UBERON:0006238!1.18e-12!50;UBERON:0001017!1.56e-12!73;UBERON:0005743!1.56e-12!73;UBERON:0002616!4.29e-12!49;UBERON:0000073!9.50e-12!75;UBERON:0001016!9.50e-12!75;UBERON:0000033!1.51e-09!63;UBERON:0002020!5.02e-09!34;UBERON:0003080!1.68e-08!40;UBERON:0002780!6.65e-08!39;UBERON:0001890!6.65e-08!39;UBERON:0006240!6.65e-08!39;UBERON:0003076!1.25e-07!12;UBERON:0003057!1.25e-07!12;UBERON:0003056!2.69e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-19,54;UBERON:0003076,2.27e-19,12;UBERON:0003057,2.27e-19,12;UBERON:0001017,2.91e-17,73;UBERON:0001049,7.33e-17,52;UBERON:0005068,7.33e-17,52;UBERON:0006241,7.33e-17,52;UBERON:0007135,7.33e-17,52;UBERON:0001016,1.24e-16,75;UBERON:0002240,1.03e-14,6;UBERON:0005174,1.03e-14,6;UBERON:0001137,1.03e-14,6;UBERON:0010314,1.54e-13,92;UBERON:0002346,1.05e-12,64;UBERON:0003075,1.05e-12,64;UBERON:0007284,1.05e-12,64;UBERON:0001948,1.99e-12,5;UBERON:0002315,1.99e-12,5;UBERON:0004121,8.52e-12,95;UBERON:0000924,8.52e-12,95;UBERON:0006601,8.52e-12,95;UBERON:0002369,7.45e-11,7;UBERON:0006858,7.45e-11,7;UBERON:0010371,1.71e-10,73;UBERON:0002950,1.66e-09,4;UBERON:0001891,1.66e-09,4;UBERON:0009616,1.66e-09,4;UBERON:0010286,1.66e-09,4;UBERON:0002616,3.63e-09,46;UBERON:0000955,6.79e-09,47;UBERON:0006238,6.79e-09,47;UBERON:0002020,1.04e-08,34;UBERON:0002257,5.06e-08,3;UBERON:0004684,1.61e-07,3;UBERON:0002275,1.61e-07,3;UBERON:0002038,1.79e-07,3;UBERON:0009663,1.79e-07,3;UBERON:0009661,1.79e-07,3;UBERON:0000125,1.79e-07,3;UBERON:0002308,1.79e-07,3;UBERON:0004733,5.59e-07,6;UBERON:0004732,5.59e-07,6;UBERON:0002028,5.59e-07,6;UBERON:0007277,5.59e-07,6|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,2.85650984403804,3.53389665522582,0.122490799214954,0.383381884072945,0,1.10115880999389,2.80912143787413,2.4577045320999,0.791317726381163,0.640413505216868,0,5.02529398202486,1.12552522006336,1.68078072554491,2.65165726926301,3.98640706237488,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.03909497345377,1.21439728736295,2.43572382649713,0.922461989024234,2.26083960828934,1.29347577849275,1.50799909595611,0.494389935468748,0,0,0,0,0,0,12.5895742714965,8.58731497935166,0.255457055208591,0,0,0,2.24685959107234,1.83000241127451,0.628271760564322,0.695297280769106,0.767146371990992,2.28566849015516,1.29793010454206,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.89260953707715,0.720332286654991,0,0,0,0.696710015581316,0,0.201683524623343,0,0.951128130562796,0,0.164698954724011,0.754005626400808,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,3.85321415970701,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.712262414669021,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.178368817602071,1.15184314421485,0.304464949114599,23.2324990983073,8.47328283455281,0.661585194164886,0.49465875882444,0.161464426695906,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.513554785824136,0.25984164595559,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,5.10567692760349,0,1.34307693091263,0.386379188064381,0.187682475451182,0.183151624267265,0,1.00314420807073,0.564751842617067,1.38097570952153,0,1.20297227640581,0.685082519770642,0,0.675022500231806,0,0,1.03552062350364,0.207574695168353,0,0.170733605754134,0,0.838452650511929,0.183843508450014,0.44449345560323,0.824140228955577,1.28367683836726,0,0.760437899670719,0,0.0936415074698824,0.256100609619477,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0,0.29551344712669,0.818462086339379,0,0,0.499621155875892,0,0.429742108096597,0.382576664137687,0,0|short_description=p2@Ldoc1}}
|EntrezGene=434784
|HGNC=
|UniProt=Q7TPY9
|association_with_transcript=-96bp_to_ENSMUST00000075983_5end
|description=CAGE_peak_2_at_Ldoc1_5end
|id=chrX:58962666..58962692,+
|ontology_enrichment_celltype=CL:0000117!1.43e-10!23;CL:0000337!1.43e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-14,23;CL:0000337,1.80e-14,23;CL:0000540,3.35e-09,33;CL:0000047,3.35e-09,33;CL:0000031,3.35e-09,33;CL:0000404,3.35e-09,33;CL:0002612,5.06e-08,3;CL:0002610,1.61e-07,3;CL:0002614,1.79e-07,3;CL:0000393,2.36e-07,39;CL:0000211,2.36e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.26e-15!71;UBERON:0003075!1.26e-15!71;UBERON:0007284!1.26e-15!71;UBERON:0001049!2.18e-14!52;UBERON:0005068!2.18e-14!52;UBERON:0006241!2.18e-14!52;UBERON:0007135!2.18e-14!52;UBERON:0004121!6.57e-13!102;UBERON:0000924!6.57e-13!102;UBERON:0006601!6.57e-13!102;UBERON:0000955!1.18e-12!50;UBERON:0006238!1.18e-12!50;UBERON:0001017!1.56e-12!73;UBERON:0005743!1.56e-12!73;UBERON:0002616!4.29e-12!49;UBERON:0000073!9.50e-12!75;UBERON:0001016!9.50e-12!75;UBERON:0000033!1.51e-09!63;UBERON:0002020!5.02e-09!34;UBERON:0003080!1.68e-08!40;UBERON:0002780!6.65e-08!39;UBERON:0001890!6.65e-08!39;UBERON:0006240!6.65e-08!39;UBERON:0003076!1.25e-07!12;UBERON:0003057!1.25e-07!12;UBERON:0003056!2.69e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-19,54;UBERON:0003076,2.27e-19,12;UBERON:0003057,2.27e-19,12;UBERON:0001017,2.91e-17,73;UBERON:0001049,7.33e-17,52;UBERON:0005068,7.33e-17,52;UBERON:0006241,7.33e-17,52;UBERON:0007135,7.33e-17,52;UBERON:0001016,1.24e-16,75;UBERON:0002240,1.03e-14,6;UBERON:0005174,1.03e-14,6;UBERON:0001137,1.03e-14,6;UBERON:0010314,1.54e-13,92;UBERON:0002346,1.05e-12,64;UBERON:0003075,1.05e-12,64;UBERON:0007284,1.05e-12,64;UBERON:0001948,1.99e-12,5;UBERON:0002315,1.99e-12,5;UBERON:0004121,8.52e-12,95;UBERON:0000924,8.52e-12,95;UBERON:0006601,8.52e-12,95;UBERON:0002369,7.45e-11,7;UBERON:0006858,7.45e-11,7;UBERON:0010371,1.71e-10,73;UBERON:0002950,1.66e-09,4;UBERON:0001891,1.66e-09,4;UBERON:0009616,1.66e-09,4;UBERON:0010286,1.66e-09,4;UBERON:0002616,3.63e-09,46;UBERON:0000955,6.79e-09,47;UBERON:0006238,6.79e-09,47;UBERON:0002020,1.04e-08,34;UBERON:0002257,5.06e-08,3;UBERON:0004684,1.61e-07,3;UBERON:0002275,1.61e-07,3;UBERON:0002038,1.79e-07,3;UBERON:0009663,1.79e-07,3;UBERON:0009661,1.79e-07,3;UBERON:0000125,1.79e-07,3;UBERON:0002308,1.79e-07,3;UBERON:0004733,5.59e-07,6;UBERON:0004732,5.59e-07,6;UBERON:0002028,5.59e-07,6;UBERON:0007277,5.59e-07,6
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,2.85650984403804,3.53389665522582,0.122490799214954,0.383381884072945,0,1.10115880999389,2.80912143787413,2.4577045320999,0.791317726381163,0.640413505216868,0,5.02529398202486,1.12552522006336,1.68078072554491,2.65165726926301,3.98640706237488,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.03909497345377,1.21439728736295,2.43572382649713,0.922461989024234,2.26083960828934,1.29347577849275,1.50799909595611,0.494389935468748,0,0,0,0,0,0,12.5895742714965,8.58731497935166,0.255457055208591,0,0,0,2.24685959107234,1.83000241127451,0.628271760564322,0.695297280769106,0.767146371990992,2.28566849015516,1.29793010454206,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.89260953707715,0.720332286654991,0,0,0,0.696710015581316,0,0.201683524623343,0,0.951128130562796,0,0.164698954724011,0.754005626400808,0,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,3.85321415970701,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.712262414669021,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.177340233642274,0.178368817602071,1.15184314421485,0.304464949114599,23.2324990983073,8.47328283455281,0.661585194164886,0.49465875882444,0.161464426695906,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.513554785824136,0.25984164595559,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,5.10567692760349,0,1.34307693091263,0.386379188064381,0.187682475451182,0.183151624267265,0,1.00314420807073,0.564751842617067,1.38097570952153,0,1.20297227640581,0.685082519770642,0,0.675022500231806,0,0,1.03552062350364,0.207574695168353,0,0.170733605754134,0,0.838452650511929,0.183843508450014,0.44449345560323,0.824140228955577,1.28367683836726,0,0.760437899670719,0,0.0936415074698824,0.256100609619477,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0,0.29551344712669,0.818462086339379,0,0,0.499621155875892,0,0.429742108096597,0.382576664137687,0,0
|short_description=p2@Ldoc1
}}

Revision as of 19:59, 14 September 2013

Short description:p2@Ldoc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ldoc1_5end
Coexpression cluster:NA
Association with transcript: -96bp_to_ENSMUST00000075983_5end
EntrezGene:Ldoc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ldoc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.66e-1954
posterior neural tube2.27e-1912
chordal neural plate2.27e-1912
central nervous system2.91e-1773
neural tube7.33e-1752
neural rod7.33e-1752
future spinal cord7.33e-1752
neural keel7.33e-1752
nervous system1.24e-1675
spinal cord1.03e-146
dorsal region element1.03e-146
dorsum1.03e-146
structure with developmental contribution from neural crest1.54e-1392
neurectoderm1.05e-1264
neural plate1.05e-1264
presumptive neural plate1.05e-1264
regional part of spinal cord1.99e-125
gray matter of spinal cord1.99e-125
ectoderm-derived structure8.52e-1295
ectoderm8.52e-1295
presumptive ectoderm8.52e-1295
adrenal gland7.45e-117
adrenal/interrenal gland7.45e-117
ecto-epithelium1.71e-1073
regional part of midbrain1.66e-094
midbrain1.66e-094
presumptive midbrain1.66e-094
midbrain neural tube1.66e-094
regional part of brain3.63e-0946
brain6.79e-0947
future brain6.79e-0947
gray matter1.04e-0834
ventral horn of spinal cord5.06e-083
raphe nuclei1.61e-073
reticular formation1.61e-073
substantia nigra1.79e-073
telencephalic nucleus1.79e-073
midbrain nucleus1.79e-073
neural nucleus1.79e-073
nucleus of brain1.79e-073
segmental subdivision of hindbrain5.59e-076
segmental subdivision of nervous system5.59e-076
hindbrain5.59e-076
presumptive hindbrain5.59e-076







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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