FFCP PHASE1:Mm9::chrX:7499517..7499528,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=556|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7499517..7499528,-|id=chrX:7499517..7499528,-|ontology_enrichment_celltype=CL:0000117!1.36e-11!23;CL:0000337!1.36e-11!23;CL:0000540!1.75e-10!33;CL:0000047!1.75e-10!33;CL:0000031!1.75e-10!33;CL:0000404!1.75e-10!33;CL:0002319!2.14e-10!43;CL:0000221!5.46e-10!44;CL:0000133!5.46e-10!44;CL:0000055!6.36e-08!50;CL:0000393!6.45e-08!39;CL:0000211!6.45e-08!39|ontology_enrichment_celltype_v019_2=CL:0002614,1.14e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.51e-35!73;UBERON:0005743!4.51e-35!73;UBERON:0002346!1.32e-34!71;UBERON:0003075!1.32e-34!71;UBERON:0007284!1.32e-34!71;UBERON:0000073!1.14e-33!75;UBERON:0001016!1.14e-33!75;UBERON:0001049!1.20e-32!52;UBERON:0005068!1.20e-32!52;UBERON:0006241!1.20e-32!52;UBERON:0007135!1.20e-32!52;UBERON:0004121!1.55e-31!102;UBERON:0000924!1.55e-31!102;UBERON:0006601!1.55e-31!102;UBERON:0000955!1.70e-30!50;UBERON:0006238!1.70e-30!50;UBERON:0002616!1.88e-29!49;UBERON:0000033!1.40e-27!63;UBERON:0003080!1.73e-23!40;UBERON:0003056!2.06e-23!49;UBERON:0002780!2.84e-22!39;UBERON:0001890!2.84e-22!39;UBERON:0006240!2.84e-22!39;UBERON:0002020!1.04e-19!34;UBERON:0002791!1.24e-16!29;UBERON:0003528!1.24e-16!29;UBERON:0001893!1.24e-16!29;UBERON:0007811!2.66e-16!86;UBERON:0000153!9.94e-14!94;UBERON:0002420!1.39e-09!8;UBERON:0007245!1.39e-09!8;UBERON:0010009!1.39e-09!8;UBERON:0010011!1.39e-09!8;UBERON:0000454!1.39e-09!8;UBERON:0003076!2.06e-09!12;UBERON:0003057!2.06e-09!12;UBERON:0000956!3.48e-09!21;UBERON:0001869!3.48e-09!21;UBERON:0000203!3.48e-09!21;UBERON:0002298!9.74e-09!6;UBERON:0000025!1.21e-07!114;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.67e-32,54;UBERON:0001049,3.10e-30,52;UBERON:0005068,3.10e-30,52;UBERON:0006241,3.10e-30,52;UBERON:0007135,3.10e-30,52;UBERON:0001017,6.00e-27,73;UBERON:0001016,4.10e-26,75;UBERON:0002616,1.45e-25,46;UBERON:0000955,6.11e-25,47;UBERON:0006238,6.11e-25,47;UBERON:0002346,8.86e-24,64;UBERON:0003075,8.86e-24,64;UBERON:0007284,8.86e-24,64;UBERON:0010371,2.52e-20,73;UBERON:0004121,1.10e-19,95;UBERON:0000924,1.10e-19,95;UBERON:0006601,1.10e-19,95;UBERON:0003080,1.07e-18,40;UBERON:0002780,1.30e-16,39;UBERON:0001890,1.30e-16,39;UBERON:0006240,1.30e-16,39;UBERON:0010314,3.06e-15,92;UBERON:0002950,4.37e-15,4;UBERON:0001891,4.37e-15,4;UBERON:0009616,4.37e-15,4;UBERON:0010286,4.37e-15,4;UBERON:0003056,1.13e-14,49;UBERON:0003076,1.31e-12,12;UBERON:0003057,1.31e-12,12;UBERON:0002020,4.84e-12,34;UBERON:0002038,1.14e-11,3;UBERON:0009663,1.14e-11,3;UBERON:0009661,1.14e-11,3;UBERON:0000125,1.14e-11,3;UBERON:0002308,1.14e-11,3;UBERON:0000025,1.85e-11,114;UBERON:0004111,2.03e-10,122;UBERON:0003528,5.36e-10,29;UBERON:0002791,5.36e-10,29;UBERON:0001893,5.36e-10,29;UBERON:0004733,8.33e-09,6;UBERON:0004732,8.33e-09,6;UBERON:0002028,8.33e-09,6;UBERON:0007277,8.33e-09,6;UBERON:0001894,2.99e-08,10;UBERON:0006222,2.99e-08,10;UBERON:0001896,1.34e-07,2;UBERON:0002298,1.34e-07,2;UBERON:0005290,1.34e-07,2;UBERON:0010096,1.34e-07,2;UBERON:0002420,1.95e-07,8;UBERON:0007245,1.95e-07,8;UBERON:0010009,1.95e-07,8;UBERON:0010011,1.95e-07,8;UBERON:0000454,1.95e-07,8;UBERON:0011216,2.87e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,1.53687322128622,0.414758449233911,0.270011876663381,0.210324961351382,1.99955689082663,0.662605622854841,0,0,0,0,2.29837208553338,1.84327839907492,0.659431438650969,0.640413505216868,0.52091337055676,4.74611098302348,3.93933827022176,4.73674568108111,0,1.42371680799103,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,4.79330046095433,2.74500361691176,0.376963056338593,2.60736480288415,1.53429274398198,2.90903262383384,1.29793010454206,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,1.28932855251423,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,5.10659408630682,0.18006109403131,0,0,0.177340233642274,0.356737635204141,1.31639216481697,2.13125464380219,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.082653455725335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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=556 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:7499517..7499528,- | |||
|id=chrX:7499517..7499528,- | |||
|ontology_enrichment_celltype=CL:0000117!1.36e-11!23;CL:0000337!1.36e-11!23;CL:0000540!1.75e-10!33;CL:0000047!1.75e-10!33;CL:0000031!1.75e-10!33;CL:0000404!1.75e-10!33;CL:0002319!2.14e-10!43;CL:0000221!5.46e-10!44;CL:0000133!5.46e-10!44;CL:0000055!6.36e-08!50;CL:0000393!6.45e-08!39;CL:0000211!6.45e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.14e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.51e-35!73;UBERON:0005743!4.51e-35!73;UBERON:0002346!1.32e-34!71;UBERON:0003075!1.32e-34!71;UBERON:0007284!1.32e-34!71;UBERON:0000073!1.14e-33!75;UBERON:0001016!1.14e-33!75;UBERON:0001049!1.20e-32!52;UBERON:0005068!1.20e-32!52;UBERON:0006241!1.20e-32!52;UBERON:0007135!1.20e-32!52;UBERON:0004121!1.55e-31!102;UBERON:0000924!1.55e-31!102;UBERON:0006601!1.55e-31!102;UBERON:0000955!1.70e-30!50;UBERON:0006238!1.70e-30!50;UBERON:0002616!1.88e-29!49;UBERON:0000033!1.40e-27!63;UBERON:0003080!1.73e-23!40;UBERON:0003056!2.06e-23!49;UBERON:0002780!2.84e-22!39;UBERON:0001890!2.84e-22!39;UBERON:0006240!2.84e-22!39;UBERON:0002020!1.04e-19!34;UBERON:0002791!1.24e-16!29;UBERON:0003528!1.24e-16!29;UBERON:0001893!1.24e-16!29;UBERON:0007811!2.66e-16!86;UBERON:0000153!9.94e-14!94;UBERON:0002420!1.39e-09!8;UBERON:0007245!1.39e-09!8;UBERON:0010009!1.39e-09!8;UBERON:0010011!1.39e-09!8;UBERON:0000454!1.39e-09!8;UBERON:0003076!2.06e-09!12;UBERON:0003057!2.06e-09!12;UBERON:0000956!3.48e-09!21;UBERON:0001869!3.48e-09!21;UBERON:0000203!3.48e-09!21;UBERON:0002298!9.74e-09!6;UBERON:0000025!1.21e-07!114;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.67e-32,54;UBERON:0001049,3.10e-30,52;UBERON:0005068,3.10e-30,52;UBERON:0006241,3.10e-30,52;UBERON:0007135,3.10e-30,52;UBERON:0001017,6.00e-27,73;UBERON:0001016,4.10e-26,75;UBERON:0002616,1.45e-25,46;UBERON:0000955,6.11e-25,47;UBERON:0006238,6.11e-25,47;UBERON:0002346,8.86e-24,64;UBERON:0003075,8.86e-24,64;UBERON:0007284,8.86e-24,64;UBERON:0010371,2.52e-20,73;UBERON:0004121,1.10e-19,95;UBERON:0000924,1.10e-19,95;UBERON:0006601,1.10e-19,95;UBERON:0003080,1.07e-18,40;UBERON:0002780,1.30e-16,39;UBERON:0001890,1.30e-16,39;UBERON:0006240,1.30e-16,39;UBERON:0010314,3.06e-15,92;UBERON:0002950,4.37e-15,4;UBERON:0001891,4.37e-15,4;UBERON:0009616,4.37e-15,4;UBERON:0010286,4.37e-15,4;UBERON:0003056,1.13e-14,49;UBERON:0003076,1.31e-12,12;UBERON:0003057,1.31e-12,12;UBERON:0002020,4.84e-12,34;UBERON:0002038,1.14e-11,3;UBERON:0009663,1.14e-11,3;UBERON:0009661,1.14e-11,3;UBERON:0000125,1.14e-11,3;UBERON:0002308,1.14e-11,3;UBERON:0000025,1.85e-11,114;UBERON:0004111,2.03e-10,122;UBERON:0003528,5.36e-10,29;UBERON:0002791,5.36e-10,29;UBERON:0001893,5.36e-10,29;UBERON:0004733,8.33e-09,6;UBERON:0004732,8.33e-09,6;UBERON:0002028,8.33e-09,6;UBERON:0007277,8.33e-09,6;UBERON:0001894,2.99e-08,10;UBERON:0006222,2.99e-08,10;UBERON:0001896,1.34e-07,2;UBERON:0002298,1.34e-07,2;UBERON:0005290,1.34e-07,2;UBERON:0010096,1.34e-07,2;UBERON:0002420,1.95e-07,8;UBERON:0007245,1.95e-07,8;UBERON:0010009,1.95e-07,8;UBERON:0010011,1.95e-07,8;UBERON:0000454,1.95e-07,8;UBERON:0011216,2.87e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,1.53687322128622,0.414758449233911,0.270011876663381,0.210324961351382,1.99955689082663,0.662605622854841,0,0,0,0,2.29837208553338,1.84327839907492,0.659431438650969,0.640413505216868,0.52091337055676,4.74611098302348,3.93933827022176,4.73674568108111,0,1.42371680799103,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.346970653532272,0.608930956624282,0.691846491768175,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,4.79330046095433,2.74500361691176,0.376963056338593,2.60736480288415,1.53429274398198,2.90903262383384,1.29793010454206,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,1.28932855251423,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,5.10659408630682,0.18006109403131,0,0,0.177340233642274,0.356737635204141,1.31639216481697,2.13125464380219,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,1.6942555278512,0,0.572895513439397,1.03111909406213,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0,0.51776031175182,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.749431733813838,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chrX:7499517..7499528,- | |||
}} |
Revision as of 20:10, 14 September 2013
Short description: | p@chrX:7499517..7499528, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7499517..7499528, - |
Coexpression cluster: | MCL_coexpression_mm9:556 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.14e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.