FFCP PHASE1:Hg19::chr1:183559642..183559653,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |||
|TSSclassifier=strong | |||
|UniProt=P19878 | |||
|association_with_transcript=62bp_to_ENST00000367535_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_NCF2_5end | |||
|id=chr1:183559642..183559653,- | |||
|ontology_enrichment_celltype=CL:0000738!1.77e-49!140;CL:0000037!9.78e-48!172;CL:0000566!9.78e-48!172;CL:0002032!8.84e-47!165;CL:0000837!8.84e-47!165;CL:0000766!8.30e-46!76;CL:0000988!3.92e-45!182;CL:0002009!1.80e-44!65;CL:0000763!1.00e-43!112;CL:0000049!1.00e-43!112;CL:0002087!3.27e-43!119;CL:0002194!4.18e-43!63;CL:0000576!4.18e-43!63;CL:0000040!4.18e-43!63;CL:0000559!4.18e-43!63;CL:0000557!2.90e-39!71;CL:0002031!3.11e-38!124;CL:0000839!5.67e-37!70;CL:0002057!8.74e-37!42;CL:0000860!5.37e-34!45;CL:0000094!4.08e-08!8;CL:0002393!5.07e-08!9;CL:0002397!5.07e-08!9;CL:0000990!1.98e-07!8;CL:0000451!7.54e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.73e-46;33!CL:0002057;8.73e-46;33!CL:0000473;2.61e-45;39!CL:0000234;2.61e-45;39!CL:0000576;7.37e-43;48!CL:0000766;1.04e-33;69!CL:0000763;1.60e-20;100!CL:0002087;9.62e-19;104!CL:0000738;2.47e-18;136!CL:0000094;1.01e-12;8!CL:0000988;4.71e-12;177!CL:0000990;1.24e-11;8!CL:0000451;4.07e-11;10!CL:0000235;7.46e-10;6!CL:0000840;3.66e-09;5!CL:0002393;6.06e-09;6!CL:0002397;6.06e-09;6!CL:0000081;1.02e-08;11!CL:0000219;1.48e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.05e-84,72;CL:0002009,2.19e-82,61;CL:0000738,2.95e-80,136;CL:0002194,4.69e-80,59;CL:0000576,4.69e-80,59;CL:0000040,4.69e-80,59;CL:0000559,4.69e-80,59;CL:0000763,2.14e-76,108;CL:0000049,2.14e-76,108;CL:0000037,1.15e-75,168;CL:0000557,3.32e-73,67;CL:0002032,4.60e-73,161;CL:0000837,4.60e-73,161;CL:0000988,9.98e-72,177;CL:0000473,1.27e-70,48;CL:0000234,1.27e-70,48;CL:0000839,1.72e-69,66;CL:0002087,1.62e-68,115;CL:0002031,1.49e-62,120;CL:0000860,8.29e-62,42;CL:0002057,8.29e-62,42;CL:0000134,8.28e-21,354;CL:0002320,7.59e-20,361;CL:0000219,1.74e-16,386;CL:0000094,9.89e-13,8;CL:0002393,1.43e-12,9;CL:0002397,1.43e-12,9;CL:0000048,1.85e-12,427;CL:0000723,2.22e-12,433;CL:0000034,4.01e-12,441;CL:0000990,1.45e-11,8;CL:0000451,5.44e-11,10;CL:0000235,7.04e-10,6;CL:0000840,2.96e-09,5;CL:0001029,2.96e-09,5;CL:0000081,1.01e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-44;42!CL:0000049;1.20e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-44!102;UBERON:0003061!1.38e-44!102;UBERON:0002193!8.77e-40!112;UBERON:0002371!6.04e-33!80;UBERON:0001474!1.08e-28!86;UBERON:0004765!1.15e-22!101;UBERON:0001434!1.15e-22!101;UBERON:0002405!1.80e-21!115;UBERON:0007023!1.71e-19!115;UBERON:0000178!4.99e-11!15;UBERON:0000179!4.99e-11!15;UBERON:0000463!4.99e-11!15;UBERON:0003081!1.25e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-14;15!UBERON:0000179;1.81e-14;15!UBERON:0000463;1.81e-14;15!UBERON:0002390;1.38e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.17e-80,98;UBERON:0003061,2.17e-80,98;UBERON:0002193,9.95e-73,108;UBERON:0002371,3.50e-64,76;UBERON:0002405,3.47e-58,93;UBERON:0001474,5.50e-58,82;UBERON:0004765,5.16e-51,90;UBERON:0001434,7.04e-44,100;UBERON:0003081,1.01e-31,203;UBERON:0002384,3.27e-19,371;UBERON:0002204,1.64e-18,167;UBERON:0000178,2.28e-14,15;UBERON:0000179,2.28e-14,15;UBERON:0000463,2.28e-14,15;UBERON:0000926,1.48e-12,315;UBERON:0004120,1.48e-12,315;UBERON:0006603,1.48e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,10.3922231817214,10.1804730917933,9.60271532026887,13.7677496897116,4.98978217526377,7.1215416725395,0,0,1.10926203050036,0,0,0,7.20194031091441,11.6315779532682,9.76548918221333,20.1523926815932,22.0247692892906,22.4090743841742,39.6937191868212,42.3221056931467,34.4469366886699,44.8588041227971,35.360438369877,29.4221052350348,44.8800132022555,44.8281236425926,32.1615832648476,41.7142273691308,25.1739026597692,28.4395621848118,41.7897993784582,36.8423302578092,32.5849052445373,37.9544026539919,43.0044896281965,31.327519164153,42.2209664238997,46.8739595410835,34.9504295436809,63.8460324982885,42.5538918518355,35.5008681927478,38.6922944495385,32.8534238604727,33.6642709292931,53.2751562317365,54.8733677621471,41.4565727547559,25.9844002163688,24.44949449598,19.9175713232957,36.6191337537574,35.89227738912,38.4134152206022,13.3955989558387,18.3003343023163,11.6905058409366,0,2.18455444504853,0,2.13365111283254,1.60158394814405,1.14950487990897,1.32208974556972,0,0.569212969109448,0.587237189370939,0,0,1.12101712596307,0.526768169550154,0,0.393010762749165,0.822405995998037,0.668745981562712,0,0,0,1.22551502573691,0.294605907474837,0.443067789167242,0.270803863765016,0.896639238079726,0.910415432919148,0,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.339928028092699,0,0.34362744548263,0,0.95569624297229,0,0,2.25862678616659,1.02389288923535,1.24930726552346,4.02521328474829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,43.8138981433823,52.0647914524809,51.4547307208008,1.43094374583205,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.4875377539009,34.9002237733493,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,0.502644862058154,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0,34.9628148644104,41.8867634599235,39.5358891688017,0.93733833986777,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,10.9461402577071,26.6196258459027,33.7334303172851,0,0,0,0,0,0,0,0.591092280605782,0,0.641715181398742,0,0,0,0.167516265334349,0,52.4304916763028,44.8742188806037,63.4055735557134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2707210449155,9.27571063520052,6.72383614161699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0.511359764496605,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.865999014529609,1.34060455107157,0,1.41215701165169,0,0,0,0,24.8649328523763,20.6452045928441,30.1913009202306,18.8203102611653,24.2703741120855,23.3450392029378,29.1616976108582,16.6556287021797,0,0,0.245040215981032,0.557409525377156,0,0,0,0.199579371432817,5.1706449935739,0.423347165447766,1.29848776109822,3.08876895924805,4.33645890163065,0.156679895773023,2.50634477090067,0.338583555603207,1.92705690124439,1.81619736471943,1.27753871307098,1.71752672377882,1.53620382154229,1.56573275524691,1.16794399198336,2.73543333562856,0,0,0,0,0,0,2.63714722689409,0,3.12041475976939,0,0,0.296964680832639,0,1.9882952955326,0.281338832821026,0,0.494411622680279,0,1.19548792950642,0.828851746593443,0,0,4.92339221844278,0,0,0,0.511572370226872,0.295930216910801,11.974154617347,0,0.969332746095218,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0.296521128680622,0.494255755786011,1.04421949505455,0.067401132980677,0,0.702793337176017,0,0,0,0.394584402849391,0,0,2.78020950365347,0.450970258243478,0,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0,1.39781334593624,0,0,0.0730893170861856,0,0.290967049465258,0,0.451961481561065,0,0,0.253243183823515,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0.821432273351958,0,0,2.62887354279315,0.837847203816763,0.229160424011684,0,0.399358000997982,1.28767814440971,0.89268582976749,0.201550417460179,0,0,0,0,0,0,2.03215996957883,0,0.136203406111576,0,0,0,2.92466059016951,3.0952078182318,0.121499113316049,0,0.709251365692784,0.314727528809989,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0.92562821219883,0,0,3.73755943986931,0.943225830597996,8.28478110694391,5.95399226174341,0,0.365377795142688,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0.751145584238999,0,0.554645257684261,0.620964029413834,0,0,0,0,0.470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| |||
|short_description=p4@NCF2 | |||
}} |
Revision as of 22:43, 10 January 2014
Short description: | p4@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NCF2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 62bp_to_ENST00000367535_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.17e-80 | 98 |
blood island | 2.17e-80 | 98 |
hemolymphoid system | 9.95e-73 | 108 |
bone marrow | 3.50e-64 | 76 |
immune system | 3.47e-58 | 93 |
bone element | 5.50e-58 | 82 |
skeletal element | 5.16e-51 | 90 |
skeletal system | 7.04e-44 | 100 |
lateral plate mesoderm | 1.01e-31 | 203 |
connective tissue | 3.27e-19 | 371 |
musculoskeletal system | 1.64e-18 | 167 |
blood | 2.28e-14 | 15 |
haemolymphatic fluid | 2.28e-14 | 15 |
organism substance | 2.28e-14 | 15 |
mesoderm | 1.48e-12 | 315 |
mesoderm-derived structure | 1.48e-12 | 315 |
presumptive mesoderm | 1.48e-12 | 315 |