FFCP PHASE1:Hg19::chr10:17271757..17271791,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=191bp_to_uc001iot.1_5end | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_6_at_uc001iot.1_5end | |||
|id=chr10:17271757..17271791,- | |||
|ontology_enrichment_celltype=CL:0000055!2.90e-25!180;CL:0002371!2.76e-19!591;CL:0000048!1.39e-16!430;CL:0000144!8.94e-16!625;CL:0000723!1.25e-15!436;CL:0000057!5.03e-15!75;CL:0000034!9.38e-15!444;CL:0002057!2.06e-11!42;CL:0000222!3.28e-11!119;CL:0000183!1.12e-10!59;CL:0000680!1.82e-10!57;CL:0000056!1.82e-10!57;CL:0000355!1.82e-10!57;CL:0000187!6.44e-10!54;CL:0000860!1.03e-09!45;CL:0000393!9.89e-09!60;CL:0000211!9.89e-09!60;CL:0002009!1.27e-08!65;CL:0000192!1.43e-08!42;CL:0000514!1.43e-08!42;CL:0002320!1.44e-08!365;CL:0000548!1.71e-08!679;CL:0000004!1.71e-08!679;CL:0000255!1.71e-08!679;CL:0000012!2.15e-08!682;CL:0002194!2.87e-08!63;CL:0000576!2.87e-08!63;CL:0000040!2.87e-08!63;CL:0000559!2.87e-08!63;CL:0000557!1.37e-07!71;CL:0000359!1.45e-07!32;CL:0000134!2.91e-07!358;CL:0000219!3.64e-07!390;CL:0000839!7.77e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-12;33!CL:0002057;1.01e-12;33!CL:0000473;2.92e-10;39!CL:0000234;2.92e-10;39!CL:0002620;1.36e-07;23!CL:0000057;2.04e-07;73!CL:0000359;2.06e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.85e-21,427;CL:0000723,1.23e-20,433;CL:0000034,2.73e-19,441;CL:0000057,1.17e-16,76;CL:0000222,4.31e-12,121;CL:0000860,1.53e-11,42;CL:0002057,1.53e-11,42;CL:0002320,2.52e-11,361;CL:0000473,2.83e-11,48;CL:0000234,2.83e-11,48;CL:0000680,4.07e-11,58;CL:0000056,4.07e-11,58;CL:0000355,4.07e-11,58;CL:0000187,1.88e-10,55;CL:0002009,5.74e-10,61;CL:0000134,8.52e-10,354;CL:0000393,1.43e-09,61;CL:0000211,1.43e-09,61;CL:0002194,1.57e-09,59;CL:0000576,1.57e-09,59;CL:0000040,1.57e-09,59;CL:0000559,1.57e-09,59;CL:0000557,1.55e-08,67;CL:0000192,1.60e-08,43;CL:0000514,1.60e-08,43;CL:0000219,1.91e-08,386;CL:0000359,5.79e-08,32;CL:0000839,8.49e-08,66;CL:0002620,1.47e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.02e-19!167;UBERON:0003081!2.65e-16!216;UBERON:0000914!3.88e-15!83;UBERON:0002329!3.88e-15!83;UBERON:0003077!3.88e-15!83;UBERON:0003059!3.88e-15!83;UBERON:0007282!3.88e-15!83;UBERON:0009618!3.88e-15!83;UBERON:0007285!3.88e-15!83;UBERON:0004290!7.38e-14!70;UBERON:0002049!7.42e-14!79;UBERON:0007798!7.42e-14!79;UBERON:0004872!7.68e-13!84;UBERON:0000055!9.10e-13!69;UBERON:0004535!1.23e-12!110;UBERON:0001637!3.88e-12!42;UBERON:0003509!3.88e-12!42;UBERON:0004572!3.88e-12!42;UBERON:0001009!8.78e-12!113;UBERON:0000486!9.27e-12!82;UBERON:0001981!1.32e-11!60;UBERON:0007500!1.32e-11!60;UBERON:0004537!1.32e-11!60;UBERON:0006965!1.32e-11!60;UBERON:0000926!1.70e-11!448;UBERON:0004120!1.70e-11!448;UBERON:0006603!1.70e-11!448;UBERON:0001134!3.02e-10!61;UBERON:0002036!3.02e-10!61;UBERON:0003082!3.02e-10!61;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0004765!2.71e-09!101;UBERON:0001434!2.71e-09!101;UBERON:0000468!9.72e-09!659;UBERON:0002371!1.43e-08!80;UBERON:0002384!1.83e-08!375;UBERON:0004573!2.43e-08!33;UBERON:0004571!2.43e-08!33;UBERON:0001474!7.52e-08!86;UBERON:0000480!9.58e-08!626;UBERON:0000467!1.11e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.11e-10;42!UBERON:0003509;6.11e-10;42!UBERON:0004572;6.11e-10;42!UBERON:0004573;1.55e-07;33!UBERON:0004571;1.55e-07;33!UBERON:0007500;2.60e-07;56!UBERON:0001981;2.60e-07;56!UBERON:0004537;2.60e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.53e-22,167;UBERON:0000926,2.40e-22,315;UBERON:0004120,2.40e-22,315;UBERON:0006603,2.40e-22,315;UBERON:0003081,2.85e-16,203;UBERON:0007503,9.39e-16,78;UBERON:0007524,3.04e-15,73;UBERON:0002329,3.80e-15,71;UBERON:0003059,3.80e-15,71;UBERON:0007282,3.80e-15,71;UBERON:0004290,3.80e-15,71;UBERON:0009618,3.80e-15,71;UBERON:0003077,1.20e-14,72;UBERON:0007285,1.20e-14,72;UBERON:0002049,6.42e-14,78;UBERON:0007798,6.42e-14,78;UBERON:0001637,3.43e-13,42;UBERON:0003509,3.43e-13,42;UBERON:0004572,3.43e-13,42;UBERON:0000055,1.88e-12,68;UBERON:0000486,2.58e-12,83;UBERON:0004872,4.79e-12,83;UBERON:0007500,1.45e-11,59;UBERON:0001981,1.45e-11,59;UBERON:0004537,1.45e-11,59;UBERON:0006965,1.45e-11,59;UBERON:0004535,1.50e-11,109;UBERON:0002384,2.14e-11,371;UBERON:0001434,3.38e-11,100;UBERON:0001134,6.90e-11,62;UBERON:0002036,6.90e-11,62;UBERON:0003082,6.90e-11,62;UBERON:0001009,1.23e-10,112;UBERON:0002385,4.72e-10,64;UBERON:0001015,4.72e-10,64;UBERON:0000383,4.72e-10,64;UBERON:0004765,1.12e-09,90;UBERON:0002371,2.74e-09,76;UBERON:0004573,1.13e-08,33;UBERON:0004571,1.13e-08,33;UBERON:0001474,1.62e-08,82;UBERON:0002405,1.90e-08,93;UBERON:0000490,1.23e-07,148;UBERON:0002199,6.58e-07,46;UBERON:0002416,6.58e-07,46 | |||
|phase1_expression=4.1786027232228,0.856402095563933,1.69145284915165,2.00146596706261,0.446961094427288,3.48935409640147,0,8.2123583545488,3.65659879479774,0.491467873003018,0,0.873765488520689,1.31883489114227,4.57935505952172,10.2733186475654,0.672325146451775,1.20538905604795,0,1.95173119516203,0.369363174230364,6.32402142857184,10.9709152517331,2.0036519099174,3.55873505189499,5.02170558379211,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0,3.56077083626975,0,0.90361775633475,0,0,0,0.293600439334847,3.32397245119126,2.80762226458198,6.07630438004385,0.447830948479849,0.647787332037959,0.515151135268373,2.76256653681173,4.91238726795452,4.60909716256851,4.88100977501938,1.6446715520873,2.78735733805593,5.46615545412086,3.07392847834921,2.83778675866302,7.58440497620561,1.29096936716765,10.8341189275473,3.57660445130949,2.72906150057846,2.47195832889593,8.26426509401437,2.88836124368484,6.39337125799041,2.96866170168044,2.19410023383795,3.40979800426155,8.70627715885752,7.37600792098482,9.34233373493363,3.51748131359441,4.69334626578181,5.42972111762792,7.26479403160043,1.84138817993782,4.43047342417238,0.211255286311942,0.637812899895131,0.419317291016752,0.898629049171961,1.05123824989054,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,1.32171328579026,0,0.526768169550154,0.393419540227666,0.786021525498329,0.616804496998528,0,0.651844533267181,0,0,0.445641827540694,0,0.443067789167242,1.08321545506006,0.896639238079726,0.390178042679635,0.822189523018381,1.93445012450094,0,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.60464117470104,1.01377082717959,2.43806866313962,2.01210257911091,2.68511379871414,3.61439152384566,1.50401373190767,6.66293987219789,0,4.86634870302636,2.45790524626576,3.54767035940102,4.47957407034943,0.327447688744282,0.364295288292542,0,3.8945687238562,3.48259474598534,5.05240249971688,1.19245312152671,0.571994910780128,0,2.98143611050058,1.72046919021225,1.73570250803797,4.52246353539208,6.71199097935849,7.97842321626196,4.59788926380983,2.84258435086262,1.77883131343355,0.66944122552934,4.02829317109147,0.760272105718513,7.32186172644509,0.735326160691737,4.0507097394088,0.625098097988558,0.898117490504679,1.35133776579987,0,1.89853131913626,7.87767498900751,0,0,0,1.98788780678127,2.02608818663328,6.09082231740807,3.44203944898576,1.77334191099179,2.24271040056923,2.1349799145941,6.90669135568048,0.311211035399766,2.2900814251847,2.61539044981534,0.302714855289863,4.03323147135999,0.70296429550139,9.67696238173994,4.56377457235559,14.6459706940765,1.996386476944,2.10434827678571,3.37081936085396,2.24569588380383,8.84407084644729,3.09977343527296,2.37600571456411,4.45080472701402,0,2.15585442544872,2.69337782326506,2.00189631795143,0.554128230968366,3.95079858792754,6.74273150757843,2.70428506031874,2.1552114800404,3.58779271377724,1.92201649936711,2.54318281391474,6.00182192168805,0.412210116953756,6.95629458123199,2.60563598864226,9.11392194102838,1.46155507741798,5.55354303337052,2.20919756741518,1.13152239773168,5.68015348026583,1.0075209822764,1.86516651541536,0,0,0.573609190778008,0,0,0.232387885739037,0.829288440122964,0.504641701751257,0.36497735907583,4.69348596989448,14.1513006402435,9.66944449467364,1.39310378409594,10.1063127433742,0.236613600079688,0.505754070234305,0.482022059766964,0.772057809126758,0.435758888184812,0,0.269662616320329,0.392442930250692,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0.441463099414651,0.122988438543114,2.40194934417936,0.109750285408626,2.24803506515239,0,0.277765335475589,1.62904152655162,13.5191522086345,2.88662684050547,4.9850074139283,1.05667824812239,2.7429625074604,9.72269576410883,7.80042024161853,0,0,1.96973604869918,1.63802985597466,3.56714789492948,0,0.503946384596579,0.141775097242386,1.34337784054272,0,3.06706143332169,0,0.968532774145487,0.414656231081544,1.00883967391873,1.13618190083742,0.888970520090367,0.381988425558278,0,5.13217338068116,2.15937734676979,1.50171528921959,0.571652865261156,0.112131084345361,0.43596006883328,1.10007428731425,4.26596662000667,3.57656445851882,5.917119267892,1.06375246633948,3.12022310734098,2.57207374262142,2.83698264046557,3.46348832720929,0.57191197463259,2.17048642156577,0.823240336780769,1.62868092146868,0.710783897485092,2.37585561880029,1.80863626235752,0,1.69954085009497,0,1.50677127429638,0,1.19812427745791,0,0,2.46128221334885,2.67119219315498,1.25342674267927,0.336255431980582,0.591092280605782,1.50939302401662,1.41177339907723,1.01637849688985,0,2.31986643833309,1.34013012267479,1.27587750330633,0,0,0,4.17151071845076,7.00238729483548,5.42530047399471,2.70362119990049,4.99601168632053,2.20783381047509,2.81139395982512,3.91229929646035,2.27407504055985,10.3473071292505,1.99267679560631,3.50301420229236,4.34418072340414,0.783204629850962,1.37257369524342,0.206768026122887,0.862856803274467,0.74709290462411,0.303127571446259,0,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| |||
|short_description=p6@uc001iot.1 | |||
}} |
Revision as of 01:57, 11 January 2014
Short description: | p6@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 191bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.85e-21 | 427 |
somatic stem cell | 1.23e-20 | 433 |
stem cell | 2.73e-19 | 441 |
fibroblast | 1.17e-16 | 76 |
mesodermal cell | 4.31e-12 | 121 |
classical monocyte | 1.53e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-11 | 42 |
connective tissue cell | 2.52e-11 | 361 |
defensive cell | 2.83e-11 | 48 |
phagocyte | 2.83e-11 | 48 |
muscle precursor cell | 4.07e-11 | 58 |
myoblast | 4.07e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.07e-11 | 58 |
muscle cell | 1.88e-10 | 55 |
macrophage dendritic cell progenitor | 5.74e-10 | 61 |
mesenchymal cell | 8.52e-10 | 354 |
electrically responsive cell | 1.43e-09 | 61 |
electrically active cell | 1.43e-09 | 61 |
monopoietic cell | 1.57e-09 | 59 |
monocyte | 1.57e-09 | 59 |
monoblast | 1.57e-09 | 59 |
promonocyte | 1.57e-09 | 59 |
granulocyte monocyte progenitor cell | 1.55e-08 | 67 |
smooth muscle cell | 1.60e-08 | 43 |
smooth muscle myoblast | 1.60e-08 | 43 |
motile cell | 1.91e-08 | 386 |
vascular associated smooth muscle cell | 5.79e-08 | 32 |
myeloid lineage restricted progenitor cell | 8.49e-08 | 66 |
skin fibroblast | 1.47e-07 | 23 |