FFCP PHASE1:Hg19::chr10:94051039..94051050,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54708 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26025 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=115bp_to_uc010qno.1_5end | |||
|description=CAGE_peak_3_at_MARCH5_5end | |||
|id=chr10:94051039..94051050,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.21e-10!119;CL:0002139!1.31e-08!24;CL:0000213!2.59e-08!57;CL:0000215!2.59e-08!57;CL:0000071!3.60e-07!18;CL:0002546!3.60e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.07e-08;24!CL:0000071;4.70e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.79e-10,121;CL:0002139,1.04e-08,24;CL:0000213,1.54e-08,58;CL:0000215,1.54e-08,58;CL:0000071,3.33e-07,18;CL:0002546,3.33e-07,18;CL:0000115,9.88e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;4.70e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.15e-10!84;UBERON:0003081!5.87e-10!216;UBERON:0000055!1.18e-09!69;UBERON:0001009!2.91e-09!113;UBERON:0004535!4.53e-09!110;UBERON:0001981!3.72e-08!60;UBERON:0007500!3.72e-08!60;UBERON:0004537!3.72e-08!60;UBERON:0006965!3.72e-08!60;UBERON:0001637!3.00e-07!42;UBERON:0003509!3.00e-07!42;UBERON:0004572!3.00e-07!42;UBERON:0001986!3.60e-07!18;UBERON:0004638!3.60e-07!18;UBERON:0004852!3.60e-07!18;UBERON:0000926!5.30e-07!448;UBERON:0004120!5.30e-07!448;UBERON:0006603!5.30e-07!448;UBERON:0002049!8.73e-07!79;UBERON:0007798!8.73e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.70e-07;18!UBERON:0001986;4.70e-07;18!UBERON:0004852;4.70e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.45e-12,203;UBERON:0004872,9.33e-12,83;UBERON:0000055,1.62e-10,68;UBERON:0000926,5.88e-10,315;UBERON:0004120,5.88e-10,315;UBERON:0006603,5.88e-10,315;UBERON:0001009,1.85e-09,112;UBERON:0004535,2.01e-09,109;UBERON:0007500,6.18e-09,59;UBERON:0001981,6.18e-09,59;UBERON:0004537,6.18e-09,59;UBERON:0006965,6.18e-09,59;UBERON:0001637,1.77e-07,42;UBERON:0003509,1.77e-07,42;UBERON:0004572,1.77e-07,42;UBERON:0003914,2.55e-07,117;UBERON:0004638,3.33e-07,18;UBERON:0001986,3.33e-07,18;UBERON:0004852,3.33e-07,18;UBERON:0002049,5.61e-07,78;UBERON:0007798,5.61e-07,78 | |||
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| |||
|short_description=p3@MARCH5 | |||
}} |
Revision as of 04:10, 11 January 2014
Short description: | p3@MARCH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MARCH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 115bp_to_uc010qno.1_5end |
EntrezGene: | MARCH5 |
HGNC: | 26025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.79e-10 | 121 |
endothelial cell of vascular tree | 1.04e-08 | 24 |
lining cell | 1.54e-08 | 58 |
barrier cell | 1.54e-08 | 58 |
blood vessel endothelial cell | 3.33e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.33e-07 | 18 |
endothelial cell | 9.88e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.45e-12 | 203 |
splanchnic layer of lateral plate mesoderm | 9.33e-12 | 83 |
vessel | 1.62e-10 | 68 |
mesoderm | 5.88e-10 | 315 |
mesoderm-derived structure | 5.88e-10 | 315 |
presumptive mesoderm | 5.88e-10 | 315 |
circulatory system | 1.85e-09 | 112 |
cardiovascular system | 2.01e-09 | 109 |
epithelial tube open at both ends | 6.18e-09 | 59 |
blood vessel | 6.18e-09 | 59 |
blood vasculature | 6.18e-09 | 59 |
vascular cord | 6.18e-09 | 59 |
artery | 1.77e-07 | 42 |
arterial blood vessel | 1.77e-07 | 42 |
arterial system | 1.77e-07 | 42 |
epithelial tube | 2.55e-07 | 117 |
blood vessel endothelium | 3.33e-07 | 18 |
endothelium | 3.33e-07 | 18 |
cardiovascular system endothelium | 3.33e-07 | 18 |
vasculature | 5.61e-07 | 78 |
vascular system | 5.61e-07 | 78 |