FFCP PHASE1:Hg19::chr10:125979042..125979061,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:125979042..125979061,- | |||
|id=chr10:125979042..125979061,- | |||
|ontology_enrichment_celltype=CL:0002057!3.87e-94!42;CL:0000860!2.61e-87!45;CL:0000766!1.40e-79!76;CL:0002194!4.64e-79!63;CL:0000576!4.64e-79!63;CL:0000040!4.64e-79!63;CL:0000559!4.64e-79!63;CL:0002009!2.18e-76!65;CL:0000839!2.29e-70!70;CL:0000557!2.91e-69!71;CL:0000763!7.94e-54!112;CL:0000049!7.94e-54!112;CL:0000738!1.12e-45!140;CL:0002087!7.02e-45!119;CL:0000037!3.12e-37!172;CL:0000566!3.12e-37!172;CL:0002031!5.05e-36!124;CL:0000988!1.21e-34!182;CL:0002032!1.64e-33!165;CL:0000837!1.64e-33!165;CL:0000134!2.15e-15!358;CL:0002320!6.74e-15!365;CL:0000219!3.80e-13!390;CL:0000767!5.95e-12!3;CL:0000842!2.44e-11!3;CL:0000048!4.72e-11!430;CL:0000723!9.37e-11!436;CL:0000034!2.27e-10!444;CL:0000224!1.27e-08!4;CL:0000094!1.15e-07!8;CL:0002393!9.35e-07!9;CL:0002397!9.35e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-97;33!CL:0002057;1.13e-97;33!CL:0000473;2.61e-76;39!CL:0000234;2.61e-76;39!CL:0000576;8.32e-57;48!CL:0000766;9.26e-36;69!CL:0002087;2.70e-14;104!CL:0000763;2.03e-13;100!CL:0000738;7.16e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.18e-102,42;CL:0002057,7.18e-102,42;CL:0000473,2.84e-96,48;CL:0000234,2.84e-96,48;CL:0002194,2.70e-76,59;CL:0000576,2.70e-76,59;CL:0000040,2.70e-76,59;CL:0000559,2.70e-76,59;CL:0002009,1.02e-73,61;CL:0000839,6.08e-68,66;CL:0000766,2.81e-67,72;CL:0000557,6.87e-67,67;CL:0000763,7.99e-44,108;CL:0000049,7.99e-44,108;CL:0002087,1.16e-37,115;CL:0002031,6.02e-36,120;CL:0000738,4.36e-34,136;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-75;42!CL:0000049;2.42e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-60!80;UBERON:0002390!1.14e-56!102;UBERON:0003061!1.14e-56!102;UBERON:0001474!9.55e-56!86;UBERON:0002193!8.46e-51!112;UBERON:0004765!3.32e-46!101;UBERON:0001434!3.32e-46!101;UBERON:0002405!8.44e-42!115;UBERON:0002204!1.80e-24!167;UBERON:0003081!3.96e-23!216;UBERON:0002384!3.21e-14!375;UBERON:0000926!9.60e-07!448;UBERON:0004120!9.60e-07!448;UBERON:0006603!9.60e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-58,76;UBERON:0001474,3.92e-54,82;UBERON:0004765,4.79e-49,90;UBERON:0002405,2.32e-47,93;UBERON:0002390,8.86e-45,98;UBERON:0003061,8.86e-45,98;UBERON:0001434,8.10e-44,100;UBERON:0002193,2.53e-40,108;UBERON:0002204,8.32e-25,167;UBERON:0003081,9.91e-20,203;UBERON:0000926,2.73e-11,315;UBERON:0004120,2.73e-11,315;UBERON:0006603,2.73e-11,315;UBERON:0002384,5.43e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.77408061658038,0,0,0,0,0,0,1.66198622559563,0.200544447470142,1.08505435357926,0.223915474239924,0,0.257575567634187,0.581592955118259,0.755751887377619,0,3.48643555358527,7.40102198439286,5.26500830521676,10.0692337312753,8.96562472851852,4.7296445977717,9.99762474136194,10.3277549373412,4.06279459783025,3.9530891303947,1.91034305040492,2.24723484445085,5.81559395504715,5.1348644332175,6.39337125799041,0,0.398927315243264,0,3.48251086354301,0.56738522469114,1.24564449799115,7.03496262718881,7.30076085788282,3.25783267057675,0.605399502633369,1.47311054395026,1.26584954976354,0,0.212604299965044,0,0.112328631146495,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:125979042..125979061,- | |||
}} |
Revision as of 05:26, 11 January 2014
Short description: | p@chr10:125979042..125979061, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:125979042..125979061, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.18e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.18e-102 | 42 |
defensive cell | 2.84e-96 | 48 |
phagocyte | 2.84e-96 | 48 |
monopoietic cell | 2.70e-76 | 59 |
monocyte | 2.70e-76 | 59 |
monoblast | 2.70e-76 | 59 |
promonocyte | 2.70e-76 | 59 |
macrophage dendritic cell progenitor | 1.02e-73 | 61 |
myeloid lineage restricted progenitor cell | 6.08e-68 | 66 |
myeloid leukocyte | 2.81e-67 | 72 |
granulocyte monocyte progenitor cell | 6.87e-67 | 67 |
myeloid cell | 7.99e-44 | 108 |
common myeloid progenitor | 7.99e-44 | 108 |
nongranular leukocyte | 1.16e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 6.02e-36 | 120 |
leukocyte | 4.36e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.15e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-28 | 161 |
hematopoietic stem cell | 6.74e-27 | 168 |
hematopoietic cell | 2.44e-25 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-58 | 76 |
bone element | 3.92e-54 | 82 |
skeletal element | 4.79e-49 | 90 |
immune system | 2.32e-47 | 93 |
hematopoietic system | 8.86e-45 | 98 |
blood island | 8.86e-45 | 98 |
skeletal system | 8.10e-44 | 100 |
hemolymphoid system | 2.53e-40 | 108 |
musculoskeletal system | 8.32e-25 | 167 |
lateral plate mesoderm | 9.91e-20 | 203 |
mesoderm | 2.73e-11 | 315 |
mesoderm-derived structure | 2.73e-11 | 315 |
presumptive mesoderm | 2.73e-11 | 315 |
connective tissue | 5.43e-10 | 371 |