FFCP PHASE1:Hg19::chr10:134210589..134210633,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_at_chr10:134210589..134210633,- | |||
|id=chr10:134210589..134210633,- | |||
|ontology_enrichment_celltype=CL:0000766!3.07e-27!76;CL:0000557!7.56e-24!71;CL:0002057!4.46e-23!42;CL:0002009!7.08e-22!65;CL:0000860!8.38e-22!45;CL:0002194!1.69e-21!63;CL:0000576!1.69e-21!63;CL:0000040!1.69e-21!63;CL:0000559!1.69e-21!63;CL:0000839!7.18e-21!70;CL:0000738!1.01e-20!140;CL:0002087!4.59e-16!119;CL:0002031!5.57e-16!124;CL:0000763!4.26e-15!112;CL:0000049!4.26e-15!112;CL:0000037!2.49e-14!172;CL:0000566!2.49e-14!172;CL:0002032!7.11e-13!165;CL:0000837!7.11e-13!165;CL:0000988!8.63e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-18;33!CL:0002057;3.42e-18;33!CL:0000576;2.00e-16;48!CL:0000473;1.33e-15;39!CL:0000234;1.33e-15;39!CL:0000766;5.64e-14;69!CL:0002087;2.83e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.75e-31,72;CL:0000738,3.48e-27,136;CL:0000557,4.14e-27,67;CL:0000473,1.06e-25,48;CL:0000234,1.06e-25,48;CL:0000860,1.28e-25,42;CL:0002057,1.28e-25,42;CL:0002009,5.20e-25,61;CL:0002194,1.32e-24,59;CL:0000576,1.32e-24,59;CL:0000040,1.32e-24,59;CL:0000559,1.32e-24,59;CL:0000839,2.06e-24,66;CL:0002031,2.06e-22,120;CL:0002087,3.82e-22,115;CL:0000037,4.91e-20,168;CL:0000988,2.25e-18,177;CL:0002032,5.04e-18,161;CL:0000837,5.04e-18,161;CL:0000763,1.85e-17,108;CL:0000049,1.85e-17,108;CL:0002393,3.50e-07,9;CL:0002397,3.50e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.59e-22!80;UBERON:0002390!2.05e-21!102;UBERON:0003061!2.05e-21!102;UBERON:0001474!1.18e-20!86;UBERON:0002193!2.34e-19!112;UBERON:0004765!5.86e-15!101;UBERON:0001434!5.86e-15!101;UBERON:0003081!1.37e-14!216;UBERON:0002405!1.66e-12!115;UBERON:0007023!9.86e-12!115;UBERON:0002204!2.67e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.42e-24,98;UBERON:0003061,6.42e-24,98;UBERON:0002371,1.25e-23,76;UBERON:0002193,8.12e-22,108;UBERON:0001474,8.38e-21,82;UBERON:0002405,2.64e-20,93;UBERON:0004765,5.31e-17,90;UBERON:0003081,6.20e-17,203;UBERON:0001434,6.06e-15,100;UBERON:0007023,3.95e-11,114;UBERON:0000926,1.56e-07,315;UBERON:0004120,1.56e-07,315;UBERON:0006603,1.56e-07,315 | |||
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| |||
|short_description=p@chr10:134210589..134210633,- | |||
}} |
Revision as of 05:39, 11 January 2014
Short description: | p@chr10:134210589..134210633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134210589..134210633, - |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.75e-31 | 72 |
leukocyte | 3.48e-27 | 136 |
granulocyte monocyte progenitor cell | 4.14e-27 | 67 |
defensive cell | 1.06e-25 | 48 |
phagocyte | 1.06e-25 | 48 |
classical monocyte | 1.28e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-25 | 42 |
macrophage dendritic cell progenitor | 5.20e-25 | 61 |
monopoietic cell | 1.32e-24 | 59 |
monocyte | 1.32e-24 | 59 |
monoblast | 1.32e-24 | 59 |
promonocyte | 1.32e-24 | 59 |
myeloid lineage restricted progenitor cell | 2.06e-24 | 66 |
hematopoietic lineage restricted progenitor cell | 2.06e-22 | 120 |
nongranular leukocyte | 3.82e-22 | 115 |
hematopoietic stem cell | 4.91e-20 | 168 |
hematopoietic cell | 2.25e-18 | 177 |
hematopoietic oligopotent progenitor cell | 5.04e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.04e-18 | 161 |
myeloid cell | 1.85e-17 | 108 |
common myeloid progenitor | 1.85e-17 | 108 |
intermediate monocyte | 3.50e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.42e-24 | 98 |
blood island | 6.42e-24 | 98 |
bone marrow | 1.25e-23 | 76 |
hemolymphoid system | 8.12e-22 | 108 |
bone element | 8.38e-21 | 82 |
immune system | 2.64e-20 | 93 |
skeletal element | 5.31e-17 | 90 |
lateral plate mesoderm | 6.20e-17 | 203 |
skeletal system | 6.06e-15 | 100 |
adult organism | 3.95e-11 | 114 |
mesoderm | 1.56e-07 | 315 |
mesoderm-derived structure | 1.56e-07 | 315 |
presumptive mesoderm | 1.56e-07 | 315 |