FFCP PHASE1:Hg19::chr11:102714328..102714346,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7173 | |||
|TSSclassifier=not | |||
|UniProt=E9PKX2,P08254 | |||
|association_with_transcript=0bp_to_ENST00000524478,NM_002422,uc001phj.1_5end | |||
|coexpression_cluster_id=C3071 | |||
|description=CAGE_peak_1_at_MMP3_5end | |||
|id=chr11:102714328..102714346,- | |||
|ontology_enrichment_celltype=CL:0000055!6.02e-30!180;CL:0000057!8.61e-19!75;CL:0000680!3.08e-15!57;CL:0000056!3.08e-15!57;CL:0000355!3.08e-15!57;CL:0000187!1.14e-13!54;CL:0002620!2.16e-13!23;CL:0000192!2.89e-12!42;CL:0000514!2.89e-12!42;CL:0000393!2.94e-11!60;CL:0000211!2.94e-11!60;CL:0000183!3.82e-11!59;CL:0000359!8.59e-10!32;CL:0000723!6.25e-09!436;CL:0000048!1.44e-08!430;CL:0000034!4.06e-08!444;CL:0002371!5.04e-07!591;CL:0002334!6.91e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.49e-17;23!CL:0000359;1.38e-10;32!CL:0000057;6.89e-10;73!CL:0000192;8.42e-10;43!CL:0000187;1.13e-08;55!CL:0002334;1.13e-08;12!CL:0002539;1.98e-08;10!CL:0002570;4.81e-08;8!CL:0000393;9.53e-07;61!CL:0000211;9.53e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.10e-25,76;CL:0002620,2.51e-17,23;CL:0000680,7.74e-17,58;CL:0000056,7.74e-17,58;CL:0000355,7.74e-17,58;CL:0000723,2.50e-16,433;CL:0000048,6.35e-16,427;CL:0000034,3.30e-15,441;CL:0000187,6.60e-15,55;CL:0000192,2.69e-13,43;CL:0000514,2.69e-13,43;CL:0000393,3.19e-12,61;CL:0000211,3.19e-12,61;CL:0000359,4.19e-11,32;CL:0002334,1.13e-08,12;CL:0002539,2.00e-08,10;CL:0002570,4.75e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000514;8.42e-10;43!CL:0000355;4.42e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!4.69e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.53e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.90e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.67e-23!95;UBERON:0000914!1.99e-21!83;UBERON:0002329!1.99e-21!83;UBERON:0003077!1.99e-21!83;UBERON:0003059!1.99e-21!83;UBERON:0007282!1.99e-21!83;UBERON:0009618!1.99e-21!83;UBERON:0007285!1.99e-21!83;UBERON:0004290!5.71e-20!70;UBERON:0000486!7.35e-19!82;UBERON:0002199!2.55e-16!45;UBERON:0002416!2.55e-16!45;UBERON:0002385!1.03e-15!63;UBERON:0001015!1.03e-15!63;UBERON:0000383!1.03e-15!63;UBERON:0001134!4.64e-15!61;UBERON:0002036!4.64e-15!61;UBERON:0003082!4.64e-15!61;UBERON:0002097!1.76e-14!40;UBERON:0005256!2.21e-13!143;UBERON:0000475!5.62e-13!365;UBERON:0004573!2.77e-10!33;UBERON:0004571!2.77e-10!33;UBERON:0001637!2.17e-09!42;UBERON:0003509!2.17e-09!42;UBERON:0004572!2.17e-09!42;UBERON:0002100!2.18e-09!216;UBERON:0001135!3.23e-09!15;UBERON:0000165!6.73e-08!28;UBERON:0000930!6.73e-08!28;UBERON:0000161!3.59e-07!35;UBERON:0002067!6.30e-07!9;UBERON:0004016!6.30e-07!9;UBERON:0010083!6.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.45e-15;31!UBERON:0001015;4.45e-15;31!UBERON:0000383;4.45e-15;31!UBERON:0002097;6.73e-15;41!UBERON:0002199;2.20e-13;46!UBERON:0002416;2.20e-13;46!UBERON:0003102;6.61e-12;50!UBERON:0004573;2.11e-11;33!UBERON:0004571;2.11e-11;33!UBERON:0001135;1.49e-10;15!UBERON:0002067;1.66e-08;9!UBERON:0004237;1.98e-08;10!UBERON:0004695;1.98e-08;10!UBERON:0002111;1.98e-08;10!UBERON:0004178;1.98e-08;10!UBERON:0001013;2.80e-08;14!UBERON:0001637;1.14e-07;42!UBERON:0003509;1.14e-07;42!UBERON:0004572;1.14e-07;42!UBERON:0002204;3.51e-07;70!UBERON:0001828;8.88e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.05e-26,99;UBERON:0002329,3.98e-23,71;UBERON:0003059,3.98e-23,71;UBERON:0007282,3.98e-23,71;UBERON:0004290,3.98e-23,71;UBERON:0009618,3.98e-23,71;UBERON:0003077,1.51e-22,72;UBERON:0007285,1.51e-22,72;UBERON:0000486,2.82e-22,83;UBERON:0007524,5.52e-22,73;UBERON:0002199,1.25e-21,46;UBERON:0002416,1.25e-21,46;UBERON:0007503,2.08e-19,78;UBERON:0002097,4.75e-19,41;UBERON:0002385,4.30e-17,64;UBERON:0001015,4.30e-17,64;UBERON:0000383,4.30e-17,64;UBERON:0001134,5.39e-17,62;UBERON:0002036,5.39e-17,62;UBERON:0003082,5.39e-17,62;UBERON:0005256,1.98e-13,122;UBERON:0004573,2.24e-12,33;UBERON:0004571,2.24e-12,33;UBERON:0001637,1.18e-10,42;UBERON:0003509,1.18e-10,42;UBERON:0004572,1.18e-10,42;UBERON:0001135,1.48e-10,15;UBERON:0000490,8.44e-10,148;UBERON:0002067,1.66e-08,9;UBERON:0004016,1.66e-08,9;UBERON:0010083,1.66e-08,9;UBERON:0004237,2.00e-08,10;UBERON:0004695,2.00e-08,10;UBERON:0002111,2.00e-08,10;UBERON:0004178,2.00e-08,10;UBERON:0001013,2.90e-08,14;UBERON:0004923,3.10e-08,66;UBERON:0003104,4.47e-08,160;UBERON:0009142,4.47e-08,160;UBERON:0002100,6.45e-08,199;UBERON:0001828,8.36e-07,8 | |||
|phase1_expression=14.1709135831034,9.63452357509424,3.24195129420734,4.00293193412522,4.91657203870017,6.10636966870258,7.59899634504932,133.292893293061,0,4.66894479352867,0.697801167972428,0,0,0,0,320.699094857497,397.175693967801,332.291091126255,407.911819788864,0,0,0,0,0,0.753255837568817,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6138411717647,5.51471701699479,102.261642386342,1753.60551324767,2160.6588241437,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,26.6672724482899,0,0,0,0,0,0,2.13459757612026,0.33472061276467,0,0,2.92874469057803,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,2.38336525463794,2.0078563452417,5.32002573297536,0,0,2.71334303258876,0,0,0,0,0,0,82.0981002063743,183.691926537313,34.2237478463624,11.7434498643765,6.79866366346152,7.16299114181467,18.7821837554502,4.91337269247072,4.64966015290945,99.7922400116925,48.7115850678757,11.8320977051943,2.15585442544872,22.2203670419367,2.00189631795143,75.9155676426661,3.95079858792754,1.22595118319608,121.692827714343,0.113432183160021,885.287852124534,21.7828536594939,25.2198962379879,845.356617669761,35.3470175287845,450.35566399976,344.13006735711,2988.01618599938,74.6367459534782,800.972365676575,25.6819217212015,0,698.658878072697,214.400465028418,264.853645188982,19.519346169493,14.1827982707234,10.0381608386151,0,0,0,0.207322110030741,0,0,1034.13140870008,99.7023454198972,20.7202382028721,6.96551892047969,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.86575485194663,2.24803506515239,1.40740561376283,0.277765335475589,0,15.5990217791937,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,162.159532797124,1.00789276919316,3.40260233381728,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,24.1291998310242,0,0,0,9.87143929951906,0,0,0,0,0.1466765716419,0.904902010304444,10.7296933755565,18.596660556232,132.171243942681,147.69056041414,0.257207374262142,0,0.799266537048298,0.142977993658148,0,0,30.9449375079048,0.355391948742546,3.95975936466715,5.42590878707255,1.74306691720059,4.69873058555668,0,0,0,0,0,4.27910715122155,50.3838947203176,6.36976599906189,181.209694798774,0,0,0,0,17.53252907135,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,1.24782516918484,5.88815663030634,0.788512075169673,1.28855556491985,0,0,15.5209606938757,0,1.10621501125022,183.758844599995,0,0,0,0,0,0.606255142892519,0,7.55975733324201,11.4129591596637,29.0043129514438,39.2924132206303,3.07533958213682,6.65219423786715,2.73451665944133,0,1575.86886096934,612.765514055602,309.783632484088,29.0782480342828,698.308164165895,0,0.601519410909855,0.184161977871793,10.6777436793084,3.27764102412091,1.96686622439136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0.082509499920588,312.974718207914,3.25030123018261,0,2.70678011217942,4.31336127921004,4.91211759123615,9.78639664640167,6.55263493696469,2.90033387828457,11.2499148189253,0.801288320820636,20.4953295047613,3.65161127993702,31.1375018486785,6.87872909817739,0,33.9997334577091,59.248167963651,9.24100740528266,341.208165433211,78.2939692867565,237.029676233914,0.143124886741991,0,0,0,0,0,2.22742273548156,10.9892809627892,183.829651650148,29.6499992114939,61.0268244150656,287.099123834109,1.58510321173008,148.282976596121,0.48763373908959,20.2282196393966,65.5030909891884,25.2524836104774,24.1803288640849,0,3.85955740482287,20.5666082324778,79.7980611161848,1.73632660280006,0,6.49313206280653,7.12594045629425,0.563391205064483,0.143411352204052,0,9.63011838999376,62.7927083404958,7.81098250601357,13.1717957183961,0,0,0.577332676353072,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0.728163130497081,0,0,0,0,0,0,0,42.631234023773,0,0,2.39097585901284,1.38141957765574,0,0,0,4.0435146396035,0,0,0,24.1676343810487,0,0,0,0.0927680981618513,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,44.7792279478715,0,0,0,0,786.365339354988,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,4.42306057399416,0,0,0,0,0,0,0,0.832048038078832,0,0.0979923974143777,0.0870592065804026,619.406038917997,0,0,0.0730893170861856,0,0,0,1.58186518546373,0.274083849293502,362.455451746253,0.253243183823515,0,0.160317640503067,0,0,0,0.114536596165916,0,2.59298636378669,0,0,0.407712618220842,0.836822770498666,1.4279750469085,0.288950589901519,0,0,0,0,0,1.11712960508902,0,0,0.199679000498991,0,0,0.134366944973453,12.6104959239841,0,0.472699093843342,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0.91124334987037,0,0.236417121897595,0,0.105600336519406,0,0,0,0,2.034148301238,301.907778575064,31.9761951744469,949.062868477943,0,0.082092520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| |||
|short_description=p1@MMP3 | |||
}} |
Revision as of 10:04, 11 January 2014
Short description: | p1@MMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP3_5end |
Coexpression cluster: | C3071_Fibroblast_Chondrocyte_Preadipocyte_mesenchymal_Hair_leiomyoma_chorionic |
Association with transcript: | 0bp_to_ENST00000524478, NM_002422, uc001phj.1_5end |
EntrezGene: | MMP3 |
HGNC: | 7173 |
UniProt: | E9PKX2P08254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.10e-25 | 76 |
skin fibroblast | 2.51e-17 | 23 |
muscle precursor cell | 7.74e-17 | 58 |
myoblast | 7.74e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.74e-17 | 58 |
somatic stem cell | 2.50e-16 | 433 |
multi fate stem cell | 6.35e-16 | 427 |
stem cell | 3.30e-15 | 441 |
muscle cell | 6.60e-15 | 55 |
smooth muscle cell | 2.69e-13 | 43 |
smooth muscle myoblast | 2.69e-13 | 43 |
electrically responsive cell | 3.19e-12 | 61 |
electrically active cell | 3.19e-12 | 61 |
vascular associated smooth muscle cell | 4.19e-11 | 32 |
preadipocyte | 1.13e-08 | 12 |
aortic smooth muscle cell | 2.00e-08 | 10 |
mesenchymal stem cell of adipose | 4.75e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.90e-07 | 14 |