FFCP PHASE1:Hg19::chr12:16761007..16761080,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAP4 | |||
|association_with_transcript=0bp_to_ENST00000354662,ENST00000396205,ENST00000441439,ENST00000544276,uc001rdm.1,uc001rdn.1,uc001rdo.1,uc001rdp.1,uc009zij.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_LMO3_5end | |||
|id=chr12:16761007..16761080,- | |||
|ontology_enrichment_celltype=CL:0000136!1.76e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.01e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.38e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.62e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-64!115;UBERON:0001049!3.57e-46!57;UBERON:0005068!3.57e-46!57;UBERON:0006241!3.57e-46!57;UBERON:0007135!3.57e-46!57;UBERON:0001017!6.05e-43!82;UBERON:0005743!1.91e-41!86;UBERON:0003080!8.16e-39!42;UBERON:0002616!1.74e-38!59;UBERON:0002780!1.49e-37!41;UBERON:0001890!1.49e-37!41;UBERON:0006240!1.49e-37!41;UBERON:0000955!1.74e-37!69;UBERON:0006238!1.74e-37!69;UBERON:0000073!7.14e-37!94;UBERON:0001016!7.14e-37!94;UBERON:0001893!7.21e-37!34;UBERON:0002020!3.37e-36!34;UBERON:0003528!3.37e-36!34;UBERON:0002791!1.76e-35!33;UBERON:0001869!5.32e-35!32;UBERON:0002346!7.33e-32!90;UBERON:0002619!3.96e-31!22;UBERON:0003075!4.21e-30!86;UBERON:0007284!4.21e-30!86;UBERON:0001950!8.90e-29!20;UBERON:0000956!1.65e-26!25;UBERON:0000203!1.65e-26!25;UBERON:0003056!6.32e-24!61;UBERON:0000153!1.28e-21!129;UBERON:0007811!1.28e-21!129;UBERON:0000033!1.19e-19!123;UBERON:0000924!2.20e-17!173;UBERON:0006601!2.20e-17!173;UBERON:0004121!4.67e-16!169;UBERON:0002420!5.54e-12!9;UBERON:0007245!5.54e-12!9;UBERON:0010009!5.54e-12!9;UBERON:0010011!5.54e-12!9;UBERON:0000454!5.54e-12!9;UBERON:0001871!1.27e-11!7;UBERON:0002308!4.81e-11!9;UBERON:0000125!4.81e-11!9;UBERON:0000025!7.90e-10!194;UBERON:0000200!1.36e-09!6;UBERON:0009663!1.95e-09!7;UBERON:0002298!2.72e-09!8;UBERON:0000475!6.90e-09!365;UBERON:0004111!7.91e-09!241;UBERON:0003076!8.44e-09!15;UBERON:0003057!8.44e-09!15;UBERON:0001872!2.14e-08!5;UBERON:0000349!6.87e-08!5;UBERON:0002021!7.67e-08!5;UBERON:0000468!2.88e-07!659;UBERON:0000477!7.28e-07!286;UBERON:0000922!7.49e-07!612;UBERON:0000481!8.49e-07!347;UBERON:0000369!9.60e-07!4;UBERON:0002435!9.60e-07!4;UBERON:0000204!9.60e-07!4;UBERON:0010082!9.60e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.79e-44;32!UBERON:0001893;3.33e-44;34!UBERON:0002791;5.57e-44;32!UBERON:0002619;1.41e-43;22!UBERON:0003528;9.93e-42;34!UBERON:0002020;9.93e-42;34!UBERON:0001950;2.91e-40;20!UBERON:0002780;9.83e-40;41!UBERON:0001890;9.83e-40;41!UBERON:0000956;1.18e-37;25!UBERON:0000203;1.18e-37;25!UBERON:0000073;1.23e-31;53!UBERON:0002616;1.23e-31;53!UBERON:0001017;6.14e-22;75!UBERON:0000955;2.40e-21;68!UBERON:0001016;7.91e-17;83!UBERON:0002420;2.75e-16;9!UBERON:0007245;2.75e-16;9!UBERON:0010009;2.75e-16;9!UBERON:0010011;2.75e-16;9!UBERON:0000454;2.75e-16;9!UBERON:0007023;5.94e-15;114!UBERON:0001871;5.13e-14;6!UBERON:0000200;5.99e-13;6!UBERON:0009663;1.07e-12;7!UBERON:0000125;3.06e-12;9!UBERON:0002308;3.06e-12;9!UBERON:0001872;3.05e-11;5!UBERON:0000349;1.78e-10;5!UBERON:0002021;1.79e-10;5!UBERON:0000369;6.35e-09;4!UBERON:0002435;6.35e-09;4!UBERON:0000204;6.35e-09;4!UBERON:0011216;1.65e-07;132!UBERON:0001870;2.03e-07;3!UBERON:0002298;4.81e-07;6!UBERON:0005383;5.89e-07;3!UBERON:0005382;5.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.26e-54,53;UBERON:0002616,4.26e-54,53;UBERON:0002780,6.31e-54,41;UBERON:0001890,6.31e-54,41;UBERON:0003080,6.31e-54,41;UBERON:0006240,6.31e-54,41;UBERON:0001049,5.25e-53,56;UBERON:0005068,5.25e-53,56;UBERON:0006241,5.25e-53,56;UBERON:0007135,5.25e-53,56;UBERON:0001893,2.24e-52,34;UBERON:0007023,1.94e-51,114;UBERON:0001017,7.88e-51,81;UBERON:0001869,1.02e-49,32;UBERON:0002791,5.48e-49,32;UBERON:0003528,1.34e-48,34;UBERON:0002020,1.34e-48,34;UBERON:0000955,1.95e-48,68;UBERON:0006238,1.95e-48,68;UBERON:0001016,2.83e-44,89;UBERON:0002619,1.57e-43,22;UBERON:0001950,3.47e-40,20;UBERON:0000956,1.30e-37,25;UBERON:0000203,1.30e-37,25;UBERON:0003056,1.01e-32,61;UBERON:0003075,3.87e-32,82;UBERON:0007284,3.87e-32,82;UBERON:0002346,1.10e-31,86;UBERON:0011216,6.40e-24,223;UBERON:0010371,1.13e-22,104;UBERON:0010314,1.32e-18,132;UBERON:0004121,4.22e-17,171;UBERON:0000924,4.22e-17,171;UBERON:0006601,4.22e-17,171;UBERON:0002420,2.52e-16,9;UBERON:0007245,2.52e-16,9;UBERON:0010009,2.52e-16,9;UBERON:0010011,2.52e-16,9;UBERON:0000454,2.52e-16,9;UBERON:0001871,5.91e-14,6;UBERON:0000200,6.14e-13,6;UBERON:0009663,1.02e-12,7;UBERON:0000125,2.92e-12,9;UBERON:0002308,2.92e-12,9;UBERON:0001872,3.03e-11,5;UBERON:0000349,1.57e-10,5;UBERON:0002021,1.84e-10,5;UBERON:0000025,3.79e-10,192;UBERON:0004111,4.82e-09,240;UBERON:0000369,6.50e-09,4;UBERON:0002435,6.50e-09,4;UBERON:0000204,6.50e-09,4;UBERON:0010082,6.50e-09,4;UBERON:0001870,2.08e-07,3;UBERON:0002298,4.55e-07,6;UBERON:0005383,6.08e-07,3;UBERON:0005382,6.08e-07,3 | |||
|phase1_expression=2.36181893051724,0.642301571672949,1.9733616573436,0,1.78784437770915,4.36169262050184,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4179722426149,1.64648067356154,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,13.0139853857622,1.54657762555539,2.01019518401218,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0,0,0,0,0,2.14870389969272,2.30628080838127,9.06050258711547,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0.709522128141196,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0772063831717,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.64398257704175,0,0,0,0,0,0,10.9356241254293,19.5530488810613,0,0,0,0.597743964753209,1.65770349318689,0,0,0,0,0,0,0,16.1775185244571,0,0,4.84666373047609,21.1511263809021,49.9034495002985,0,0,12.3249927823915,0,0,0,0,1.45802306691627,0,3.54296554325536,22.7927269002021,0,1.3269511191747,0.295547618953547,16.6732901837019,0,0,8.07977714289869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,6.19202951523374,3.05515072466813,0,0,0,1.68502832451693,0,3.51396668588009,0,0,0,2.36750641709634,1.20990716048664,45.9109142445735,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,2.32773639572207,0.970817393606503,0.677942222341597,0,0,37.7332343897037,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.80126086612937,1.64286454670392,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.89268582976749,0.0671834724867263,0,0,0,0,0,0,0,2.38568906942791,14.0289508294923,0,0,0,0,0,36.3889844381568,0,0.394028536495991,0.0524545881349981,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.58679122091228,0,0,18.7945846119143,5.97376359378731,7.87054205159671,0,0,0,0,1.63205341010842,7.7713867147037,6.12691153526923,3.93447156851765,0.314108192500469,19.4934999592737,19.4021761194121,19.1542123980945,1.72022758707021,1.44207766997908,2.17337410294842,43.5798200049127,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9319111043869,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0.637724760305049,2.10690799240304,0,0,0,0,0,0,24.6640224370405,5.6678630530234,7.50279137568611,10.6660509405193,117.969553831764,12.5866199484877,36.1705446215346,0,0,0,0,0,0,0,0,0.451261970095544,0,10.1596821460302,0,0,0,23.7732297856749,14.0594057750493,20.6686796501184,21.4345438455405,68.9188259362957,0,0,0,0,0,0,3.64179362541979,11.8384339502675,0.177404740325278,0.230467975111559,0,3.67036558074891,20.3237870309204,25.884451153589,0,8.24177474930397,15.2402122218522,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,1.12929087541872,0,0,0,0,0,0,0,0,0.385870790539723,0,0,8.33504293963279,0,0.981542335574726,1.48523200163543,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,1.14671666521161,0,15.8420172144831,46.25317317608,1.5870805215462,0,0,0,0,0,0.633492505057185,0,0,0,0,1.66713136080127,0,0,2.37895890482359,0.639701945702943,1.1903221573187,1.0334225573761,5.77294842951479,0,18.2030872675552,6.66986723562124,0,0.684466602170562,0.0673520530145875,0.215166616178029,1.33064142618405,0,0,0,0,2.34640942403454,2.44482888365733,0.406896178315738,1.99727032255654,1.40891655513718,0.961705476909699 | |||
|short_description=p2@LMO3 | |||
}} |
Revision as of 12:30, 11 January 2014
Short description: | p2@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMO3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000354662, ENST00000396205, ENST00000441439, ENST00000544276, uc001rdm.1, uc001rdn.1, uc001rdo.1, uc001rdp.1, uc009zij.1_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.38e-08 | 15 |