FFCP PHASE1:Hg19::chr12:105863654..105863682,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr12:105863654..105863682,+ | |||
|id=chr12:105863654..105863682,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.65e-64!24;CL:0000115!2.47e-62!35;CL:0000071!9.80e-49!18;CL:0002546!9.80e-49!18;CL:0002078!9.14e-48!44;CL:0000213!2.35e-37!57;CL:0000215!2.35e-37!57;CL:0000222!9.27e-34!119;CL:1000413!1.50e-25!9;CL:0002543!6.07e-18!6;CL:0002544!1.45e-17!6;CL:0005020!4.02e-17!6;CL:0002138!4.02e-17!6;CL:0005022!4.02e-17!6;CL:0000220!2.21e-12!246;CL:0002321!3.44e-12!248;CL:0000076!8.40e-12!62;CL:0002594!6.26e-11!4;CL:0002618!6.40e-10!3;CL:0000359!3.39e-09!32;CL:0002144!1.70e-08!3;CL:0002548!2.66e-07!6;CL:0002545!5.32e-07!2;CL:0002494!5.63e-07!16;CL:0000666!7.39e-07!4;CL:0002188!7.39e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.21e-107;24!CL:0000115;2.06e-94;36!CL:0000071;2.12e-78;18!CL:0002078;1.25e-54;45!CL:1000413;5.74e-45;9!CL:0000213;3.67e-40;58!CL:0000215;3.67e-40;58!CL:0002543;3.92e-31;6!CL:0002544;1.84e-30;6!CL:0002138;1.18e-29;6!CL:0002618;1.21e-16;3!CL:0002188;8.53e-16;5!CL:0000076;4.25e-13;63!CL:0002545;2.28e-11;2!CL:1000746;2.53e-11;7!CL:1000612;2.53e-11;7!CL:0002262;2.14e-10;2!CL:1000398;2.14e-10;2!CL:0002548;1.19e-07;6!CL:0002144;4.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.66e-111,36;CL:0002139,4.20e-107,24;CL:0002078,8.68e-88,45;CL:0000071,1.71e-78,18;CL:0002546,1.71e-78,18;CL:0000213,1.07e-66,58;CL:0000215,1.07e-66,58;CL:1000413,6.04e-45,9;CL:0000222,7.74e-41,121;CL:0002543,3.82e-31,6;CL:0002544,1.84e-30,6;CL:0005020,1.18e-29,6;CL:0002138,1.18e-29,6;CL:0005022,1.18e-29,6;CL:0000076,1.32e-19,63;CL:0002618,1.24e-16,3;CL:0002321,6.19e-16,250;CL:0002188,9.05e-16,5;CL:0002545,2.22e-11,2;CL:1000746,2.64e-11,7;CL:1000612,2.64e-11,7;CL:0002262,1.90e-10,2;CL:1000398,1.90e-10,2;CL:0000066,2.24e-10,253;CL:0002548,1.22e-07,6;CL:0002144,3.56e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.12e-78;18!CL:0005022;1.18e-29;6!CL:0000222;3.65e-14;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.69e-61!69;UBERON:0002049!3.93e-54!79;UBERON:0007798!3.93e-54!79;UBERON:0001981!1.59e-50!60;UBERON:0007500!1.59e-50!60;UBERON:0004537!1.59e-50!60;UBERON:0006965!1.59e-50!60;UBERON:0001986!9.80e-49!18;UBERON:0004638!9.80e-49!18;UBERON:0004852!9.80e-49!18;UBERON:0004872!9.37e-47!84;UBERON:0004535!8.93e-46!110;UBERON:0001009!3.28e-44!113;UBERON:0003914!2.13e-39!118;UBERON:0000487!6.83e-39!22;UBERON:0006914!1.40e-33!25;UBERON:0001637!1.37e-28!42;UBERON:0003509!1.37e-28!42;UBERON:0004572!1.37e-28!42;UBERON:0003915!1.50e-25!9;UBERON:0004700!1.50e-25!9;UBERON:0001917!1.50e-25!9;UBERON:0004111!9.06e-22!241;UBERON:0000025!5.05e-21!194;UBERON:0003081!1.13e-19!216;UBERON:0000477!7.40e-18!286;UBERON:0004573!2.83e-17!33;UBERON:0004571!2.83e-17!33;UBERON:0000490!4.87e-15!138;UBERON:0001473!1.25e-12!8;UBERON:0004536!1.25e-12!8;UBERON:0006558!1.25e-12!8;UBERON:0000483!5.44e-12!309;UBERON:0000119!9.47e-12!312;UBERON:0001638!1.17e-11!9;UBERON:0003920!1.17e-11!9;UBERON:0004582!1.17e-11!9;UBERON:0001310!6.26e-11!4;UBERON:0002465!6.25e-10!10;UBERON:0000947!3.24e-09!21;UBERON:0010191!3.24e-09!21;UBERON:0001915!1.70e-08!3;UBERON:0001982!1.70e-08!3;UBERON:0003513!2.56e-08!8;UBERON:0000926!1.19e-07!448;UBERON:0004120!1.19e-07!448;UBERON:0006603!1.19e-07!448;UBERON:0000948!4.68e-07!24;UBERON:0005498!4.68e-07!24;UBERON:0004140!4.68e-07!24;UBERON:0009881!4.68e-07!24;UBERON:0004141!4.68e-07!24;UBERON:0003084!4.68e-07!24;UBERON:0007005!4.68e-07!24;UBERON:0004139!4.68e-07!24;UBERON:0004291!4.68e-07!24;UBERON:0005800!5.32e-07!2;UBERON:0001515!5.32e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.12e-78;18!UBERON:0001986;2.12e-78;18!UBERON:0004852;2.12e-78;18!UBERON:0000487;1.97e-63;22!UBERON:0006914;2.39e-55;25!UBERON:0003915;5.74e-45;9!UBERON:0004700;5.74e-45;9!UBERON:0001917;5.74e-45;9!UBERON:0000490;1.20e-37;33!UBERON:0000055;7.90e-32;65!UBERON:0007500;2.58e-29;56!UBERON:0001981;2.58e-29;56!UBERON:0004537;2.58e-29;56!UBERON:0002049;2.05e-22;75!UBERON:0007798;2.05e-22;75!UBERON:0001473;4.13e-22;8!UBERON:0004536;4.13e-22;8!UBERON:0006558;4.13e-22;8!UBERON:0001638;1.46e-20;9!UBERON:0003920;1.46e-20;9!UBERON:0004582;1.46e-20;9!UBERON:0003914;7.30e-19;74!UBERON:0002465;1.41e-17;10!UBERON:0001637;2.61e-17;42!UBERON:0003509;2.61e-17;42!UBERON:0004572;2.61e-17;42!UBERON:0004535;2.17e-15;109!UBERON:0000025;1.89e-14;93!UBERON:0004573;2.52e-12;33!UBERON:0004571;2.52e-12;33!UBERON:0001009;3.10e-12;112!UBERON:0005800;2.28e-11;2!UBERON:0001515;2.28e-11;2!UBERON:0000074;2.53e-11;7!UBERON:0001229;2.53e-11;7!UBERON:0003513;5.05e-11;7!UBERON:0000353;5.14e-11;15!UBERON:0001281;2.14e-10;2!UBERON:0003497;2.14e-10;2!UBERON:0003909;2.14e-10;2!UBERON:0003835;2.14e-10;2!UBERON:0002066;3.61e-10;5!UBERON:0004111;1.04e-09;130!UBERON:0000119;1.16e-09;139!UBERON:0010260;1.75e-09;9!UBERON:0000483;1.95e-08;136!UBERON:0000947;2.91e-08;21!UBERON:0010191;2.91e-08;21!UBERON:0001280;3.29e-07;3!UBERON:0004647;3.29e-07;3!UBERON:0010523;4.18e-07;3!UBERON:0001915;4.18e-07;3!UBERON:0001982;4.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.71e-78,18;UBERON:0001986,1.71e-78,18;UBERON:0004852,1.71e-78,18;UBERON:0000487,1.65e-63,22;UBERON:0000055,5.81e-60,68;UBERON:0006914,2.05e-55,25;UBERON:0002049,1.92e-51,78;UBERON:0007798,1.92e-51,78;UBERON:0003915,6.04e-45,9;UBERON:0004700,6.04e-45,9;UBERON:0001917,6.04e-45,9;UBERON:0007500,1.65e-43,59;UBERON:0001981,1.65e-43,59;UBERON:0004537,1.65e-43,59;UBERON:0006965,1.65e-43,59;UBERON:0004535,4.85e-43,109;UBERON:0001009,1.05e-41,112;UBERON:0004872,9.49e-38,83;UBERON:0003914,3.49e-34,117;UBERON:0001473,4.14e-22,8;UBERON:0004536,4.14e-22,8;UBERON:0006558,4.14e-22,8;UBERON:0004111,4.62e-21,240;UBERON:0001638,1.44e-20,9;UBERON:0003920,1.44e-20,9;UBERON:0004582,1.44e-20,9;UBERON:0001637,2.47e-20,42;UBERON:0003509,2.47e-20,42;UBERON:0004572,2.47e-20,42;UBERON:0003081,3.90e-18,203;UBERON:0000025,4.28e-18,192;UBERON:0002465,1.41e-17,10;UBERON:0000490,1.81e-15,148;UBERON:0004573,3.20e-13,33;UBERON:0004571,3.20e-13,33;UBERON:0005800,2.22e-11,2;UBERON:0001515,2.22e-11,2;UBERON:0010532,2.64e-11,7;UBERON:0000074,2.64e-11,7;UBERON:0001229,2.64e-11,7;UBERON:0001230,2.64e-11,7;UBERON:0003220,2.64e-11,7;UBERON:0005749,2.64e-11,7;UBERON:0004199,2.64e-11,7;UBERON:0004209,2.64e-11,7;UBERON:0004198,2.64e-11,7;UBERON:0000926,4.62e-11,315;UBERON:0004120,4.62e-11,315;UBERON:0006603,4.62e-11,315;UBERON:0000353,5.04e-11,15;UBERON:0003513,5.47e-11,7;UBERON:0001281,1.90e-10,2;UBERON:0003497,1.90e-10,2;UBERON:0003909,1.90e-10,2;UBERON:0003835,1.90e-10,2;UBERON:0002066,3.67e-10,5;UBERON:0005103,6.61e-10,8;UBERON:0000083,6.61e-10,8;UBERON:0009201,6.61e-10,8;UBERON:0006553,6.61e-10,8;UBERON:0003074,6.61e-10,8;UBERON:0003060,6.61e-10,8;UBERON:0000483,9.23e-10,306;UBERON:0000119,1.33e-09,309;UBERON:0010260,1.75e-09,9;UBERON:0000080,8.14e-09,9;UBERON:0002120,8.14e-09,9;UBERON:0004875,8.14e-09,9;UBERON:0005721,8.14e-09,9;UBERON:0005754,8.14e-09,9;UBERON:0007297,8.14e-09,9;UBERON:0000058,1.39e-08,19;UBERON:0000947,2.91e-08,21;UBERON:0010191,2.91e-08,21;UBERON:0001280,3.04e-07,3;UBERON:0004647,3.04e-07,3;UBERON:0005171,3.04e-07,3;UBERON:0004876,3.17e-07,11;UBERON:0010523,3.56e-07,3;UBERON:0001915,3.56e-07,3;UBERON:0001982,3.56e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,6.55915944310127,12.0432843314857,7.63709103536707,31.6572447477445,23.9114678639646,11.5549577614828,13.5846728248927,20.1565072152077,13.8748842447817,9.0374565446461,1.61131726843659,1.52054421143703,0.24406205754817,11.7652185710678,19.4434067491622,29.3796106054622,33.005817776047,22.6349075771478,33.7296602424943,6.6448596169769,14.839341258363,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,2.82892411346345,2.7788523529288,0,0,0,0,2.2818872861778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,2.45422961193825,4.62985512576611,3.23432058798817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54933536283586,4.76262374774244,1.29549549661284,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,3.86437194203376,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0.66343897524122,3.06915619677634,0,0,0.405820753925408,4.64735247149625,0.563391205064483,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr12:105863654..105863682,+ | |||
}} |
Revision as of 15:39, 11 January 2014
Short description: | p@chr12:105863654..105863682, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105863654..105863682, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.66e-111 | 36 |
endothelial cell of vascular tree | 4.20e-107 | 24 |
meso-epithelial cell | 8.68e-88 | 45 |
blood vessel endothelial cell | 1.71e-78 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.71e-78 | 18 |
lining cell | 1.07e-66 | 58 |
barrier cell | 1.07e-66 | 58 |
endothelial cell of artery | 6.04e-45 | 9 |
mesodermal cell | 7.74e-41 | 121 |
vein endothelial cell | 3.82e-31 | 6 |
aortic endothelial cell | 1.84e-30 | 6 |
lymphangioblast | 1.18e-29 | 6 |
endothelial cell of lymphatic vessel | 1.18e-29 | 6 |
vascular lymphangioblast | 1.18e-29 | 6 |
squamous epithelial cell | 1.32e-19 | 63 |
endothelial cell of umbilical vein | 1.24e-16 | 3 |
embryonic cell | 6.19e-16 | 250 |
glomerular endothelial cell | 9.05e-16 | 5 |
thoracic aorta endothelial cell | 2.22e-11 | 2 |
glomerular cell | 2.64e-11 | 7 |
kidney corpuscule cell | 2.64e-11 | 7 |
endothelial cell of sinusoid | 1.90e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.90e-10 | 2 |
epithelial cell | 2.24e-10 | 253 |
cardiac fibroblast | 1.22e-07 | 6 |
capillary endothelial cell | 3.56e-07 | 3 |