FFCP PHASE1:Hg19::chr13:29293058..29293138,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27501 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z3Q1 | |||
|association_with_transcript=0bp_to_ENST00000380814,uc001usi.2_5end | |||
|description=CAGE_peak_1_at_SLC46A3_5end | |||
|id=chr13:29293058..29293138,- | |||
|ontology_enrichment_celltype=CL:0000738!9.79e-17!140;CL:0002031!9.75e-14!124;CL:0000037!4.19e-13!172;CL:0000566!4.19e-13!172;CL:0002087!5.61e-13!119;CL:0002032!2.53e-11!165;CL:0000837!2.53e-11!165;CL:0000988!5.43e-11!182;CL:0000766!4.64e-08!76;CL:0000791!5.81e-08!18;CL:0000789!5.81e-08!18;CL:0002420!5.81e-08!18;CL:0002419!5.81e-08!18;CL:0000790!5.81e-08!18;CL:0000557!9.54e-08!71;CL:0000838!2.16e-07!52;CL:0000542!5.28e-07!53;CL:0000051!5.28e-07!53;CL:0000839!5.49e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.65e-08;18!CL:0000789;4.65e-08;18!CL:0002419;4.65e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.78e-19,136;CL:0002031,6.61e-16,120;CL:0000037,3.83e-15,168;CL:0002087,4.10e-15,115;CL:0002032,3.21e-13,161;CL:0000837,3.21e-13,161;CL:0000988,1.17e-12,177;CL:0000766,7.43e-10,72;CL:0000557,1.44e-09,67;CL:0000839,1.08e-08,66;CL:0002009,3.41e-08,61;CL:0000791,5.00e-08,18;CL:0000789,5.00e-08,18;CL:0002420,5.00e-08,18;CL:0002419,5.00e-08,18;CL:0000790,5.00e-08,18;CL:0002194,6.33e-08,59;CL:0000576,6.33e-08,59;CL:0000040,6.33e-08,59;CL:0000559,6.33e-08,59;CL:0000838,1.16e-07,52;CL:0000542,2.90e-07,53;CL:0000051,2.90e-07,53;CL:0000763,5.99e-07,108;CL:0000049,5.99e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;4.65e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.18e-27!115;UBERON:0002390!1.99e-09!102;UBERON:0003061!1.99e-09!102;UBERON:0002193!3.23e-08!112;UBERON:0001049!7.37e-08!57;UBERON:0005068!7.37e-08!57;UBERON:0006241!7.37e-08!57;UBERON:0007135!7.37e-08!57;UBERON:0002616!1.96e-07!59;UBERON:0000955!2.52e-07!69;UBERON:0006238!2.52e-07!69;UBERON:0003080!7.21e-07!42;UBERON:0002780!9.89e-07!41;UBERON:0001890!9.89e-07!41;UBERON:0006240!9.89e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.93e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-26,114;UBERON:0002390,4.04e-11,98;UBERON:0003061,4.04e-11,98;UBERON:0002193,7.52e-10,108;UBERON:0001049,1.05e-07,56;UBERON:0005068,1.05e-07,56;UBERON:0006241,1.05e-07,56;UBERON:0007135,1.05e-07,56;UBERON:0002371,1.16e-07,76;UBERON:0002405,1.24e-07,93;UBERON:0004765,1.83e-07,90;UBERON:0000073,2.59e-07,53;UBERON:0002616,2.59e-07,53;UBERON:0001474,4.06e-07,82;UBERON:0000955,5.16e-07,68;UBERON:0006238,5.16e-07,68;UBERON:0001434,6.61e-07,100 | |||
|phase1_expression=19.6212649612201,14.5588356245869,16.2097564710367,19.0139266870948,27.2646267600646,14.8297549097063,30.3959853801973,1.26343974685366,6.7908263331958,1.22866968250754,0,4.15038607047327,4.22027165165526,1.98026164736075,4.63956326019082,2.01697543935533,1.20538905604795,1.46062018077475,0.975865597581014,1.10808952269109,1.22400414746552,1.88072832886853,1.71741592278634,0.684372125364421,5.27279086298172,2.8272960126742,2.54511827294832,2.20390187678302,4.72037132218685,7.29275856384704,7.27635779585557,1.83884244895785,3.614471025339,0.739508020333575,7.35938405512865,8.81449241422014,9.68881449804996,3.87796785972314,6.21687787157439,8.68043482863407,72.5486136537355,92.9574821474471,80.8787282371346,5.52513307362346,3.77875943688809,7.5201058968223,4.88100977501938,4.93401465626191,4.64559556342655,11.2200033005639,8.96562472851852,5.91205574721463,5.86067657252252,6.45484683583826,4.06279459783025,3.76484679085209,4.91231070104122,3.82029923556644,3.36692281607993,2.56743221660875,3.83602275479425,17.1522676097092,12.3667467725412,16.1965405202424,2.03146467040009,5.10646702222026,1.24564449799115,7.5374599577023,6.25779502104242,9.33912032232002,4.23779651843358,2.94622108790052,3.16462387440884,21.5480392038181,17.4335525971336,17.820984868212,11.345191745796,13.6660972485771,9.96498637521897,21.0909430368524,23.8700012638908,26.1209739883427,22.879511779972,27.3069305631066,22.2377313465889,19.2028600154928,25.6253431703048,24.7143549180428,29.7470192753188,22.8972901088487,15.3687501659551,15.8554041130153,8.41001101875504,1.32171328579026,5.60508562981536,10.271979306228,14.7532327585375,18.8645166119599,15.0089094269642,26.4154662717271,14.9924242651452,16.5706732007157,25.3274746930285,16.3773371621205,17.9709603559651,26.3625334554509,24.1015438750864,17.1642368432405,12.7458160608681,21.0480517892705,27.358651760799,26.0822777161547,25.2087157375503,32.639981026945,35.5420780936921,21.7553937979327,12.6462762888634,17.1813722741315,22.5187525897358,22.2995790026868,23.4390043388311,31.3649174667963,25.2966200050658,29.5649071766706,26.2354525759926,26.0454977248419,20.5281999230262,8.46748321543876,14.1743303765259,14.3376159843971,2.43806866313962,2.68280343881454,2.42938867502708,1.44575660953827,1.00267582127178,2.17269778441236,0,0,2.17430079477356,0.443458794925128,1.31752178539689,17.1582588902004,1.82147644146271,2.22470665670658,46.4102772926197,50.149364342189,34.4361117743861,19.7947218173434,20.0198218773045,26.3734825943991,0.79504962946682,0.860234595106124,4.85996702250632,1.69592382577203,5.45349267072878,24.485505732666,4.38889429727302,10.0782536076038,6.04802646567407,4.01664735317604,0.402829317109147,0,2.92874469057803,1.83831540172934,12.1521292182264,5.09008451219255,2.2452937262617,4.27923625836624,0,2.84779697870439,5.1296488300514,2.63560834872127,11.6334079244498,3.05265836499774,13.9152146474689,1.39293562831038,3.97227542439656,2.0078563452417,1.41867352879343,1.12135520028461,37.3621485053967,5.67335361359468,1.24484414159907,5.11900553864815,1.14423332179421,4.54072282934794,4.60940739583999,1.17160715916898,0,0.570471821544449,0.298897361103602,1.40921398372518,0.809364721840658,0.98315564691574,2.04154171254893,1.47401180774122,3.20309921644873,8.31602000097437,8.15980866619238,0,0,1.34668891163253,0.875829639103749,1.6623846929051,5.70670907145089,4.59731693698529,10.3664260645552,8.73427810332162,3.04962380671065,10.0371972744727,2.96704661623387,3.00091096084402,2.78241828943785,4.89517026086695,4.83903826462134,1.68776332241266,1.07180705677318,1.26216887122057,5.06274442532646,6.14255015911485,7.4552014428489,1.71278566986988,2.20428770003634,27.0565194428616,21.8196896472668,22.9443676311203,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0.36497735907583,0,6.43240938192885,5.52539685409922,15.7885095530873,7.21879481669586,0,0,0,0,0,0,0,0,0,10.3341763647451,14.0241773803446,1.2347220339942,0,69.715269152007,48.1585336172037,65.5776796416359,21.6316918713179,1.8448265781467,0.686271241194102,37.7540981805672,3.37205259772859,4.42327478611176,1.38882667737794,0.651616610620649,1.03993478527958,0,2.78232971940184,20.6639301855046,1.01056513432752,0,1.52203321787679,10.2726571734706,9.4433477830436,45.5501461261685,19.4223540065567,36.5632659230272,23.4334584966942,28.724943922005,18.8560879332374,1.16426079513703,1.74380363108377,0.383382679165211,137.945706610864,209.995515121544,5.39053100406007,5.47655822984453,13.3816979431963,0.317489471460845,0.381988425558278,0,0,1.7480673759565,0.300343057843917,1.42913216315289,2.01835951821649,0.43596006883328,1.6134422880609,27.0177885933756,7.15312891703765,0.845302752556,4.78688609852767,1.04007436911366,1.02882949704857,1.41849132023278,0,20.5888310867732,8.68194568626309,1.64648067356154,3.25736184293735,17.4142054883847,2.37585561880029,20.7993170171114,24.4029368408082,15.1958946596727,51.0819878693,44.1986240460271,42.1667878966063,3.11512312139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| |||
|short_description=p1@SLC46A3 | |||
}} |
Revision as of 17:08, 11 January 2014
Short description: | p1@SLC46A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC46A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380814, uc001usi.2_5end |
EntrezGene: | SLC46A3 |
HGNC: | 27501 |
UniProt: | Q7Z3Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.78e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 6.61e-16 | 120 |
hematopoietic stem cell | 3.83e-15 | 168 |
nongranular leukocyte | 4.10e-15 | 115 |
hematopoietic oligopotent progenitor cell | 3.21e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.21e-13 | 161 |
hematopoietic cell | 1.17e-12 | 177 |
myeloid leukocyte | 7.43e-10 | 72 |
granulocyte monocyte progenitor cell | 1.44e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.08e-08 | 66 |
macrophage dendritic cell progenitor | 3.41e-08 | 61 |
mature alpha-beta T cell | 5.00e-08 | 18 |
alpha-beta T cell | 5.00e-08 | 18 |
immature T cell | 5.00e-08 | 18 |
mature T cell | 5.00e-08 | 18 |
immature alpha-beta T cell | 5.00e-08 | 18 |
monopoietic cell | 6.33e-08 | 59 |
monocyte | 6.33e-08 | 59 |
monoblast | 6.33e-08 | 59 |
promonocyte | 6.33e-08 | 59 |
lymphoid lineage restricted progenitor cell | 1.16e-07 | 52 |
lymphocyte | 2.90e-07 | 53 |
common lymphoid progenitor | 2.90e-07 | 53 |
myeloid cell | 5.99e-07 | 108 |
common myeloid progenitor | 5.99e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-26 | 114 |
hematopoietic system | 4.04e-11 | 98 |
blood island | 4.04e-11 | 98 |
hemolymphoid system | 7.52e-10 | 108 |
neural tube | 1.05e-07 | 56 |
neural rod | 1.05e-07 | 56 |
future spinal cord | 1.05e-07 | 56 |
neural keel | 1.05e-07 | 56 |
bone marrow | 1.16e-07 | 76 |
immune system | 1.24e-07 | 93 |
skeletal element | 1.83e-07 | 90 |
regional part of nervous system | 2.59e-07 | 53 |
regional part of brain | 2.59e-07 | 53 |
bone element | 4.06e-07 | 82 |
brain | 5.16e-07 | 68 |
future brain | 5.16e-07 | 68 |
skeletal system | 6.61e-07 | 100 |