FFCP PHASE1:Hg19::chr17:38612942..38613067,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38612942..38613067,+ | |||
|id=chr17:38612942..38613067,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.67e-25!180;CL:0000222!3.12e-20!119;CL:0000183!5.39e-17!59;CL:0000680!1.83e-16!57;CL:0000056!1.83e-16!57;CL:0000355!1.83e-16!57;CL:0000187!3.38e-15!54;CL:0000057!2.82e-14!75;CL:0000393!6.53e-13!60;CL:0000211!6.53e-13!60;CL:0000192!6.59e-13!42;CL:0000514!6.59e-13!42;CL:0000359!5.53e-10!32;CL:0000220!8.82e-10!246;CL:0002321!1.18e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.74e-10;43!CL:0000359;6.83e-10;32!CL:0000187;1.93e-09;55!CL:0000393;4.30e-08;61!CL:0000211;4.30e-08;61!CL:0000134;3.09e-07;55!CL:0000057;5.71e-07;73!CL:0000723;8.67e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.26e-21,121;CL:0000680,1.72e-18,58;CL:0000056,1.72e-18,58;CL:0000355,1.72e-18,58;CL:0000187,4.96e-17,55;CL:0000057,7.85e-17,76;CL:0000192,3.99e-14,43;CL:0000514,3.99e-14,43;CL:0000393,7.17e-14,61;CL:0000211,7.17e-14,61;CL:0000359,2.14e-10,32;CL:0000048,1.02e-07,427;CL:0000723,6.02e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.74e-10;43!CL:0000355;1.39e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.28e-24!143;UBERON:0002100!2.52e-22!216;UBERON:0000914!5.94e-19!83;UBERON:0002329!5.94e-19!83;UBERON:0003077!5.94e-19!83;UBERON:0003059!5.94e-19!83;UBERON:0007282!5.94e-19!83;UBERON:0009618!5.94e-19!83;UBERON:0007285!5.94e-19!83;UBERON:0000490!6.26e-19!138;UBERON:0003914!1.11e-18!118;UBERON:0004290!3.63e-17!70;UBERON:0001134!4.57e-17!61;UBERON:0002036!4.57e-17!61;UBERON:0003082!4.57e-17!61;UBERON:0002385!5.82e-17!63;UBERON:0001015!5.82e-17!63;UBERON:0000383!5.82e-17!63;UBERON:0004872!1.15e-16!84;UBERON:0000486!2.34e-16!82;UBERON:0002049!7.42e-16!79;UBERON:0007798!7.42e-16!79;UBERON:0003104!2.06e-15!238;UBERON:0009142!2.06e-15!238;UBERON:0001981!9.03e-13!60;UBERON:0007500!9.03e-13!60;UBERON:0004537!9.03e-13!60;UBERON:0006965!9.03e-13!60;UBERON:0000481!1.02e-12!347;UBERON:0000475!1.31e-12!365;UBERON:0000055!2.01e-12!69;UBERON:0001009!2.67e-12!113;UBERON:0004535!4.15e-12!110;UBERON:0001637!1.08e-10!42;UBERON:0003509!1.08e-10!42;UBERON:0004572!1.08e-10!42;UBERON:0000119!3.13e-10!312;UBERON:0000477!4.59e-10!286;UBERON:0000483!1.07e-09!309;UBERON:0004573!2.47e-09!33;UBERON:0004571!2.47e-09!33;UBERON:0000926!1.43e-08!448;UBERON:0004120!1.43e-08!448;UBERON:0006603!1.43e-08!448;UBERON:0009569!4.98e-08!113;UBERON:0000468!5.03e-08!659;UBERON:0003103!2.28e-07!69;UBERON:0004111!2.84e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.46e-09;33!UBERON:0004571;4.46e-09;33!UBERON:0002385;1.50e-08;31!UBERON:0001015;1.50e-08;31!UBERON:0000383;1.50e-08;31!UBERON:0001637;3.12e-08;42!UBERON:0003509;3.12e-08;42!UBERON:0004572;3.12e-08;42!UBERON:0002384;2.79e-07;198!UBERON:0001013;2.91e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,8.67e-21,160;UBERON:0009142,8.67e-21,160;UBERON:0005256,1.50e-20,122;UBERON:0007503,1.63e-20,78;UBERON:0001134,9.53e-19,62;UBERON:0002036,9.53e-19,62;UBERON:0003082,9.53e-19,62;UBERON:0002385,1.20e-18,64;UBERON:0001015,1.20e-18,64;UBERON:0000383,1.20e-18,64;UBERON:0007524,4.49e-18,73;UBERON:0002329,5.04e-18,71;UBERON:0003059,5.04e-18,71;UBERON:0007282,5.04e-18,71;UBERON:0004290,5.04e-18,71;UBERON:0009618,5.04e-18,71;UBERON:0000490,1.93e-17,148;UBERON:0003077,1.97e-17,72;UBERON:0007285,1.97e-17,72;UBERON:0002100,3.23e-17,199;UBERON:0003914,6.15e-17,117;UBERON:0004872,1.07e-16,83;UBERON:0002049,1.12e-15,78;UBERON:0007798,1.12e-15,78;UBERON:0000486,1.52e-15,83;UBERON:0001009,2.97e-13,112;UBERON:0004535,4.97e-13,109;UBERON:0000055,2.01e-12,68;UBERON:0007500,2.41e-12,59;UBERON:0001981,2.41e-12,59;UBERON:0004537,2.41e-12,59;UBERON:0006965,2.41e-12,59;UBERON:0001637,2.95e-11,42;UBERON:0003509,2.95e-11,42;UBERON:0004572,2.95e-11,42;UBERON:0000926,1.42e-10,315;UBERON:0004120,1.42e-10,315;UBERON:0006603,1.42e-10,315;UBERON:0004573,4.08e-10,33;UBERON:0004571,4.08e-10,33;UBERON:0000119,2.74e-07,309;UBERON:0001013,3.42e-07,14;UBERON:0009569,4.75e-07,112;UBERON:0000483,8.27e-07,306;UBERON:0007100,8.43e-07,27;UBERON:0000948,9.85e-07,24;UBERON:0005498,9.85e-07,24;UBERON:0004140,9.85e-07,24;UBERON:0009881,9.85e-07,24;UBERON:0004141,9.85e-07,24;UBERON:0003084,9.85e-07,24;UBERON:0007005,9.85e-07,24;UBERON:0004139,9.85e-07,24;UBERON:0004291,9.85e-07,24 | |||
|phase1_expression=15.987697375809,15.2011371962598,9.3029906703341,24.0175916047513,14.7497161161005,38.3828950604162,15.1979926900986,6.31719873426831,20.8948502559871,1.22866968250754,5.58240934377942,0.873765488520689,0.263766978228454,30.5702891811315,54.6805669951061,6.05092631806598,3.61616716814386,9.49403117503585,3.90346239032406,0.492484232307152,5.50801866359483,1.25381888591235,0,0.273748850145768,0.87879847716362,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0.553995408531877,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0.383220493601921,0,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0,0,0,0,7.31420598941885,8.04841031644363,2.30152611318355,15.5418835525363,29.0775988168816,48.0890442949935,0.795285947051099,20.9252994230133,0.850813354476611,4.21285855178871,3.60122621341817,2.0956652079634,0,0,0,0,0,0,0,0,0.79504962946682,4.30117297553062,2.08284300964557,2.26123176769604,2.09749718104953,4.12677062910101,2.50793959844173,2.32575083252396,1.06729878806013,1.33888245105868,1.61131726843659,3.80136052859256,3.66093086322254,1.83831540172934,6.48113558305408,2.23249320710199,2.46982309888787,2.13961812918312,1.53316637465883,0.949265659568129,4.03043836646896,0,0,0,7.45457927542978,2.65924074495618,1.19168262731897,4.58938593198102,6.73869926176878,11.7742296029885,5.33744978648525,5.42668606517752,2.17847724779836,2.15537075311501,1.9615428373615,9.98959022456547,14.404398112,2.10889288650417,3.43376084513353,1.1409436430889,3.58676833324323,0.469737994575059,0.161872944368132,0.421352420106746,9.59524604897998,4.29920110591188,14.3622835834314,21.384051431077,26.9520952913627,0,7.90479955997862,1.0100166837244,2.00189631795143,2.21651292387346,5.70670907145089,40.4563890454706,23.5873752483357,2.04177929688038,1.07633781413317,6.62027905337559,6.99375273826554,4.20127534518163,5.25567899116038,1.03056216018252,5.02515512095292,2.70042131586026,3.11798416515836,1.00973509697646,5.98324341174946,9.69876340912871,2.84007674013291,2.51880245569101,4.40857540007268,0.193260853163297,0.272746120590835,0.286804595389004,0.609868530647977,0.132529768321485,0.464775771478074,0.518305275076852,1.26160425437814,0.72995471815166,6.25798129319264,6.43240938192885,1.38134921352481,10.2160944167035,20.934504968418,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,5.90524363699719,2.80483547606892,2.4694440679884,7.3504355692771,8.87285243752816,10.8110993834539,5.31710916013264,0,0,2.74508496477641,0.109750285408626,0,0,0.185176890317059,1.95484983186195,5.19967392639789,8.6598805215164,0.115930404975077,1.87853910777315,1.58803092537181,4.1668696131895,3.61482889245737,0,0.858486162094873,0.246217006087397,0,0.297262324577456,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0.763976851116555,0,3.4214489204541,0.822619941626588,1.50171528921959,0.285826432630578,3.58819469905154,3.48768055066624,6.23375429478075,0.775630294546667,7.15312891703765,5.917119267892,3.19125739901845,10.4007436911366,5.40135485950498,8.5109479213967,10.3904649816279,8.43570162583071,12.4802969240032,6.58592269424615,2.93162565864362,13.1495021034742,12.6712299669349,4.22015127883421,4.35766729300147,10.2972180917519,0,1.50677127429638,0,1.19812427745791,10.3375742250703,0,10.8585980000684,21.985966512891,3.58121926479791,0,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,28.5871175705596,69.5237024272951,34.1793929861667,24.748532522166,42.6445283225217,25.5477912354974,13.7055455541474,6.62081419400982,72.7704012979152,10.3473071292505,3.32112799267718,7.37476674166813,6.95068915744663,18.7969111164231,12.01001983338,0,0.215714200818617,0,2.42502057157008,1.66435439510497,3.32629322662648,7.69134204238208,5.37116906508219,18.8042263270159,14.7360021644056,10.7458522304008,10.6163587954781,37.1045166112477,2.00472601943452,4.97172830876756,1.47828880824856,3.63478100428535,7.43746422143739,0.241718899183244,0.40101294060657,0.184161977871793,4.24813458209045,7.10155555226196,8.78533580228142,1.35359883872224,0.924184045252977,3.13739907670742,1.46139224653261,0.844413031143006,9.09867072567173,1.87103075804167,4.31831832204279,6.16909010761157,3.52230368807009,12.5422443463713,0,1.66215201785745,1.56712328305525,0,0,0.256450125116389,0.328014645699706,0,3.50339439602256,0.366277859273374,0.082509499920588,0.574265537996172,0,11.2478750890912,3.38347514022427,7.70243085573222,6.7541616879497,1.65403886981437,5.04875150880886,15.9518363305651,3.83519823372454,2.8490251406956,0.330569830721956,0.384380134730212,0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| |||
|short_description=p@chr17:38612942..38613067,+ | |||
}} |
Revision as of 15:10, 20 January 2014
Short description: | p@chr17:38612942..38613067, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38612942..38613067, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.26e-21 | 121 |
muscle precursor cell | 1.72e-18 | 58 |
myoblast | 1.72e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-18 | 58 |
muscle cell | 4.96e-17 | 55 |
fibroblast | 7.85e-17 | 76 |
smooth muscle cell | 3.99e-14 | 43 |
smooth muscle myoblast | 3.99e-14 | 43 |
electrically responsive cell | 7.17e-14 | 61 |
electrically active cell | 7.17e-14 | 61 |
vascular associated smooth muscle cell | 2.14e-10 | 32 |
multi fate stem cell | 1.02e-07 | 427 |
somatic stem cell | 6.02e-07 | 433 |