FFCP PHASE1:Hg19::chr19:13953876..13953941,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_at_chr19:13953876..13953941,+ | |||
|id=chr19:13953876..13953941,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.08e-35!140;CL:0002057!1.90e-34!42;CL:0000860!4.33e-32!45;CL:0000766!6.00e-30!76;CL:0000037!2.82e-27!172;CL:0000566!2.82e-27!172;CL:0002031!1.84e-26!124;CL:0002087!1.03e-25!119;CL:0000557!1.40e-25!71;CL:0000988!3.58e-24!182;CL:0002032!4.13e-24!165;CL:0000837!4.13e-24!165;CL:0002009!5.20e-23!65;CL:0000839!2.67e-22!70;CL:0002194!1.16e-21!63;CL:0000576!1.16e-21!63;CL:0000040!1.16e-21!63;CL:0000559!1.16e-21!63;CL:0000763!1.10e-19!112;CL:0000049!1.10e-19!112;CL:0002320!2.46e-12!365;CL:0000134!2.89e-12!358;CL:0000219!7.16e-11!390;CL:0000034!6.96e-09!444;CL:0002393!1.47e-08!9;CL:0002397!1.47e-08!9;CL:0000094!2.02e-08!8;CL:0000048!5.78e-08!430;CL:0000723!8.91e-08!436;CL:0000003!5.46e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-54;33!CL:0002057;1.59e-54;33!CL:0000576;7.09e-43;48!CL:0000473;2.84e-37;39!CL:0000234;2.84e-37;39!CL:0000766;1.40e-33;69!CL:0002087;2.10e-17;104!CL:0000094;4.50e-17;8!CL:0000738;1.32e-15;136!CL:0000763;2.62e-15;100!CL:0002393;1.01e-12;6!CL:0002397;1.01e-12;6!CL:0000081;6.46e-12;11!CL:0000988;3.10e-10;177!CL:0000219;6.71e-08;193!CL:0000767;9.78e-08;3!CL:0000623;2.53e-07;3!CL:0000226;6.80e-07;3!CL:0000842;6.80e-07;3!CL:0000775;7.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.41e-76,42;CL:0002057,1.41e-76,42;CL:0000766,3.13e-73,72;CL:0000738,7.67e-73,136;CL:0000473,2.78e-65,48;CL:0000234,2.78e-65,48;CL:0000557,9.08e-63,67;CL:0000037,1.81e-58,168;CL:0002009,8.19e-58,61;CL:0000839,6.25e-56,66;CL:0002194,1.41e-54,59;CL:0000576,1.41e-54,59;CL:0000040,1.41e-54,59;CL:0000559,1.41e-54,59;CL:0000988,2.11e-54,177;CL:0002031,3.30e-54,120;CL:0002087,9.31e-53,115;CL:0002032,7.26e-51,161;CL:0000837,7.26e-51,161;CL:0000763,4.96e-49,108;CL:0000049,4.96e-49,108;CL:0000134,9.20e-22,354;CL:0002320,6.55e-21,361;CL:0000219,6.44e-18,386;CL:0002393,2.01e-17,9;CL:0002397,2.01e-17,9;CL:0000094,4.13e-17,8;CL:0000034,3.32e-15,441;CL:0000048,6.50e-15,427;CL:0000723,2.11e-14,433;CL:0000081,6.08e-12,11;CL:0000767,9.60e-08,3;CL:0000623,2.54e-07,3;CL:0000825,2.54e-07,3;CL:0000226,6.35e-07,3;CL:0000842,6.35e-07,3;CL:0000775,7.31e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-54;42!CL:0000049;7.99e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.23e-25!102;UBERON:0003061!2.23e-25!102;UBERON:0002371!2.43e-23!80;UBERON:0002193!1.60e-20!112;UBERON:0001474!5.23e-20!86;UBERON:0004765!7.27e-17!101;UBERON:0001434!7.27e-17!101;UBERON:0002405!4.60e-15!115;UBERON:0002384!3.90e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-10;15!UBERON:0000179;1.71e-10;15!UBERON:0000463;1.71e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.70e-63,98;UBERON:0003061,6.70e-63,98;UBERON:0002371,3.59e-56,76;UBERON:0002193,1.98e-55,108;UBERON:0001474,5.88e-51,82;UBERON:0002405,3.51e-45,93;UBERON:0004765,4.39e-45,90;UBERON:0001434,4.58e-39,100;UBERON:0003081,3.24e-23,203;UBERON:0002384,9.48e-20,371;UBERON:0002204,1.59e-17,167;UBERON:0000178,1.87e-10,15;UBERON:0000179,1.87e-10,15;UBERON:0000463,1.87e-10,15;UBERON:0000926,4.09e-09,315;UBERON:0004120,4.09e-09,315;UBERON:0006603,4.09e-09,315 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.314843125254717,20.0615781192941,10.747223146722,29.4150634300544,0,0,0,0,0,6.45920966536664,11.0799081706375,10.4283112684474,15.4077718208255,0,0,0,2.32637182047304,3.02300754951048,6.0646015296954,5.34586784883075,9.45686142450199,16.1047312865454,4.02769349251011,2.81776777182011,10.4052181150977,9.3081333798887,9.03678557017357,10.8341189275473,7.52969358170419,6.82265375144614,8.31476892446813,10.7129362329816,7.06043859567406,12.7867425159808,1.64925650093358,3.19141852194611,2.98357325372886,5.5139755339431,1.13477044938228,7.4738669879469,7.03496262718881,6.25779502104242,12.1625753034865,1.81619850790011,5.15588690382591,6.0127853613768,5.91514801673437,5.31510749912609,4.82214884669265,4.94245977044578,5.70672192797724,3.05378614724452,5.13022938734247,2.18808344918999,2.92262646023414,0,1.63841583378639,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0,2.84606484554724,1.17447437874188,3.05818582500183,14.5388461436928,5.60508562981536,0.790152254325231,1.180258620683,3.93010762749165,2.87842098599313,0,0.977766799900771,0.946895611469467,1.94826728407911,0.334231370655521,0.294605907474837,1.32920336750173,1.62482318259009,0.896639238079726,0.910415432919148,0,0.276350017785848,0.289803085735052,1.92772532110679,1.87278579662799,1.04535523804977,0.339928028092699,4.59864592322305,3.09264700934367,1.77113784413652,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,1.64225599384209,3.02410114837099,8.55808626507223,2.31719046212478,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0.370784442784429,0,0,0,1.43094374583205,2.85997455390064,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,44.8053419282615,65.9226449052153,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.538168907066586,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0.653638332277218,0,0,0.392442930250692,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0.176096868026452,26.9526550203004,22.1944728262121,34.4641843254017,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,7.09310736726938,7.33133754522359,11.6792163014571,0,0,0.773288812777695,0,0.637938751653163,8.23907726341901,2.99161459204025,6.21623270154053,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,4.75566460082641,11.4328526433867,3.62873696531711,0.606255142892519,0,0.30239029332968,0,0,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.70894156152249,1.19115887728894,1.23408681925858,3.24236655596359,4.32025149790492,1.58625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0.481764225311099,0,0,0,0,0,2.16903884225481,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.71623345421307,1.48482340416319,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0.173559738335131,0.979923974143776,0.0870592065804026,0,0.343972064943233,0,0.219267951258557,0,0,0,0,0,0.19871461170299,0,0.977756913674015,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0.321506296930038,0.137539436597234,1.246321014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| |||
|short_description=p@chr19:13953876..13953941,+ | |||
}} |
Revision as of 21:42, 20 January 2014
Short description: | p@chr19:13953876..13953941, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13953876..13953941, + |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.70e-63 | 98 |
blood island | 6.70e-63 | 98 |
bone marrow | 3.59e-56 | 76 |
hemolymphoid system | 1.98e-55 | 108 |
bone element | 5.88e-51 | 82 |
immune system | 3.51e-45 | 93 |
skeletal element | 4.39e-45 | 90 |
skeletal system | 4.58e-39 | 100 |
lateral plate mesoderm | 3.24e-23 | 203 |
connective tissue | 9.48e-20 | 371 |
musculoskeletal system | 1.59e-17 | 167 |
blood | 1.87e-10 | 15 |
haemolymphatic fluid | 1.87e-10 | 15 |
organism substance | 1.87e-10 | 15 |
mesoderm | 4.09e-09 | 315 |
mesoderm-derived structure | 4.09e-09 | 315 |
presumptive mesoderm | 4.09e-09 | 315 |