FFCP PHASE1:Hg19::chr21:15988765..15988783,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388813 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-428bp_to_ENST00000467280,ENST00000469393_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_LOC388813_5end | |||
|id=chr21:15988765..15988783,- | |||
|ontology_enrichment_celltype=CL:0002009!3.37e-40!65;CL:0002194!2.82e-39!63;CL:0000576!2.82e-39!63;CL:0000040!2.82e-39!63;CL:0000559!2.82e-39!63;CL:0002057!3.67e-38!42;CL:0000557!5.71e-38!71;CL:0000839!2.41e-36!70;CL:0000860!5.08e-35!45;CL:0000766!1.28e-32!76;CL:0000763!6.03e-26!112;CL:0000049!6.03e-26!112;CL:0000738!9.20e-26!140;CL:0002087!9.51e-25!119;CL:0002031!5.88e-22!124;CL:0000037!1.44e-19!172;CL:0000566!1.44e-19!172;CL:0002032!7.92e-19!165;CL:0000837!7.92e-19!165;CL:0000988!9.36e-18!182;CL:0000990!9.82e-13!8;CL:0000451!3.54e-10!10;CL:0000453!3.37e-08!5;CL:0000034!2.07e-07!444;CL:0000134!2.82e-07!358;CL:0002541!5.29e-07!3;CL:0002320!7.01e-07!365;CL:0002322!7.59e-07!5;CL:0000219!8.63e-07!390;CL:0000840!8.99e-07!5;CL:0001029!8.99e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.43e-72;33!CL:0002057;9.43e-72;33!CL:0000473;5.48e-59;39!CL:0000234;5.48e-59;39!CL:0000576;2.20e-36;48!CL:0000990;4.18e-25;8!CL:0000766;5.13e-21;69!CL:0000451;2.24e-20;10!CL:0000453;1.81e-15;5!CL:0000840;7.40e-13;5!CL:0002087;1.83e-12;104!CL:0000763;3.43e-12;100!CL:0000738;1.52e-11;136!CL:0000540;3.55e-07;6!CL:0000404;3.55e-07;6!CL:0000988;8.87e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.67e-67,61;CL:0002194,2.36e-65,59;CL:0000576,2.36e-65,59;CL:0000040,2.36e-65,59;CL:0000559,2.36e-65,59;CL:0000473,7.46e-62,48;CL:0000234,7.46e-62,48;CL:0000557,6.05e-61,67;CL:0000860,6.28e-61,42;CL:0002057,6.28e-61,42;CL:0000839,7.97e-58,66;CL:0000766,1.61e-52,72;CL:0000763,1.76e-46,108;CL:0000049,1.76e-46,108;CL:0000738,3.01e-40,136;CL:0002087,9.28e-38,115;CL:0002031,6.33e-36,120;CL:0002032,6.40e-35,161;CL:0000837,6.40e-35,161;CL:0000037,3.72e-33,168;CL:0000988,4.32e-31,177;CL:0000990,4.26e-25,8;CL:0000451,2.28e-20,10;CL:0000453,1.78e-15,5;CL:0000840,7.52e-13,5;CL:0001029,7.52e-13,5;CL:0000134,1.07e-11,354;CL:0000048,1.32e-11,427;CL:0000723,2.49e-11,433;CL:0002320,2.56e-11,361;CL:0000034,5.63e-11,441;CL:0000219,5.54e-10,386;CL:0000540,3.21e-07,6;CL:0000031,3.21e-07,6;CL:0000404,3.21e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-45;42!CL:0000049;1.91e-12;108!CL:0000031;3.55e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.91e-32!80;UBERON:0001474!2.09e-29!86;UBERON:0002390!7.26e-29!102;UBERON:0003061!7.26e-29!102;UBERON:0002193!5.59e-28!112;UBERON:0002405!2.06e-25!115;UBERON:0004765!2.11e-23!101;UBERON:0001434!2.11e-23!101;UBERON:0002204!1.33e-11!167;UBERON:0003081!6.37e-11!216;UBERON:0009722!1.04e-07!11;UBERON:0007690!1.04e-07!11;UBERON:0000476!5.29e-07!3;UBERON:0000920!5.29e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.08e-53,76;UBERON:0001474,1.08e-48,82;UBERON:0004765,8.30e-44,90;UBERON:0002405,3.44e-42,93;UBERON:0002390,1.04e-39,98;UBERON:0003061,1.04e-39,98;UBERON:0001434,8.67e-39,100;UBERON:0002193,1.95e-35,108;UBERON:0002204,3.84e-22,167;UBERON:0003081,5.43e-17,203;UBERON:0002384,8.42e-11,371;UBERON:0000926,1.70e-08,315;UBERON:0004120,1.70e-08,315;UBERON:0006603,1.70e-08,315 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.447830948479849,0,2.06060454107349,0,0,0,5.57829688573643,8.63452564845834,17.6532631410209,4.31538588483226,5.12321413058201,11.8241114944293,33.7850767121886,23.8829332926016,21.6682378550947,1.50593871634084,3.0019676506363,7.86532195557796,12.8555234795779,16.0464513538047,7.67204550958849,0,0.398927315243264,0,26.4090407152011,18.7237124148076,19.9303119678584,9.79869794501299,10.9511412868242,13.6828972164223,16.9511860737343,53.7685348541844,31.9627011315293,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6837061715686,10.6219139752553,6.38198210490553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.348581828608555,0.10366105501537,0.252320850875628,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,3.27605971194933,1.18904929830983,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60124445176006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0,0,0,1.35393286007176,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,1.92555211236127,2.07720169014593,4.72445172258151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,5.65094895634227,7.44043105754833,30.423163331587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,8.06637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC388813 | |||
}} |
Revision as of 12:59, 21 January 2014
Short description: | p1@LOC388813 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC388813_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -428bp_to_ENST00000467280, ENST00000469393_5end |
EntrezGene: | LOC388813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.08e-53 | 76 |
bone element | 1.08e-48 | 82 |
skeletal element | 8.30e-44 | 90 |
immune system | 3.44e-42 | 93 |
hematopoietic system | 1.04e-39 | 98 |
blood island | 1.04e-39 | 98 |
skeletal system | 8.67e-39 | 100 |
hemolymphoid system | 1.95e-35 | 108 |
musculoskeletal system | 3.84e-22 | 167 |
lateral plate mesoderm | 5.43e-17 | 203 |
connective tissue | 8.42e-11 | 371 |
mesoderm | 1.70e-08 | 315 |
mesoderm-derived structure | 1.70e-08 | 315 |
presumptive mesoderm | 1.70e-08 | 315 |