FFCP PHASE1:Hg19::chr3:238958..238968,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1939 | |||
|TSSclassifier=strong | |||
|UniProt=C9JW79 | |||
|association_with_transcript=-4bp_to_ENST00000421198_5end | |||
|description=CAGE_peak_7_at_CHL1_5end | |||
|id=chr3:238958..238968,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.00e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.68e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.51e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-60!57;UBERON:0005068!2.19e-60!57;UBERON:0006241!2.19e-60!57;UBERON:0007135!2.19e-60!57;UBERON:0007023!3.06e-54!115;UBERON:0002616!5.61e-50!59;UBERON:0001017!1.41e-49!82;UBERON:0005743!5.68e-48!86;UBERON:0003075!2.34e-45!86;UBERON:0007284!2.34e-45!86;UBERON:0002780!5.01e-45!41;UBERON:0001890!5.01e-45!41;UBERON:0006240!5.01e-45!41;UBERON:0000955!9.14e-44!69;UBERON:0006238!9.14e-44!69;UBERON:0003080!1.19e-43!42;UBERON:0002346!1.80e-42!90;UBERON:0000073!1.38e-41!94;UBERON:0001016!1.38e-41!94;UBERON:0002020!7.86e-40!34;UBERON:0003528!7.86e-40!34;UBERON:0001893!1.49e-39!34;UBERON:0002791!2.08e-38!33;UBERON:0001869!2.74e-37!32;UBERON:0000956!1.27e-31!25;UBERON:0000203!1.27e-31!25;UBERON:0003056!1.50e-30!61;UBERON:0002619!8.22e-29!22;UBERON:0001950!6.22e-26!20;UBERON:0000153!1.94e-24!129;UBERON:0007811!1.94e-24!129;UBERON:0000033!2.18e-24!123;UBERON:0004121!6.92e-22!169;UBERON:0000924!6.43e-21!173;UBERON:0006601!6.43e-21!173;UBERON:0003076!3.37e-17!15;UBERON:0003057!3.37e-17!15;UBERON:0000025!2.39e-14!194;UBERON:0004733!3.01e-13!12;UBERON:0002028!3.01e-13!12;UBERON:0007277!3.01e-13!12;UBERON:0004732!5.39e-12!13;UBERON:0001871!9.32e-12!7;UBERON:0000064!4.23e-11!219;UBERON:0004111!1.18e-10!241;UBERON:0002420!8.52e-10!9;UBERON:0007245!8.52e-10!9;UBERON:0010009!8.52e-10!9;UBERON:0010011!8.52e-10!9;UBERON:0000454!8.52e-10!9;UBERON:0002680!9.07e-10!9;UBERON:0001895!9.07e-10!9;UBERON:0010092!9.07e-10!9;UBERON:0002308!1.25e-09!9;UBERON:0000125!1.25e-09!9;UBERON:0000477!3.18e-09!286;UBERON:0000475!3.96e-09!365;UBERON:0000200!5.89e-09!6;UBERON:0002298!1.29e-08!8;UBERON:0000481!1.43e-08!347;UBERON:0000349!2.58e-08!5;UBERON:0001872!4.35e-08!5;UBERON:0000483!1.57e-07!309;UBERON:0009663!2.68e-07!7;UBERON:0000119!2.75e-07!312;UBERON:0001894!6.52e-07!7;UBERON:0006222!6.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.58e-33;32!UBERON:0002619;1.06e-32;22!UBERON:0000956;1.51e-32;25!UBERON:0000203;1.51e-32;25!UBERON:0001869;1.72e-32;32!UBERON:0003528;3.03e-32;34!UBERON:0002020;3.03e-32;34!UBERON:0001893;1.41e-27;34!UBERON:0001950;8.07e-27;20!UBERON:0002780;8.69e-23;41!UBERON:0001890;8.69e-23;41!UBERON:0000073;1.53e-22;53!UBERON:0002616;1.53e-22;53!UBERON:0001017;6.06e-17;75!UBERON:0001016;9.14e-17;83!UBERON:0000955;1.17e-12;68!UBERON:0000349;4.77e-12;5!UBERON:0000369;1.13e-08;4!UBERON:0002435;1.13e-08;4!UBERON:0000204;1.13e-08;4!UBERON:0001954;1.45e-08;2!UBERON:0003022;1.45e-08;2!UBERON:0002421;1.45e-08;2!UBERON:0002600;1.45e-08;2!UBERON:0001871;2.09e-08;6!UBERON:0001872;1.50e-07;5!UBERON:0004733;1.95e-07;12!UBERON:0002028;1.95e-07;12!UBERON:0002021;2.47e-07;5!UBERON:0011216;5.69e-07;132!UBERON:0007023;6.61e-07;114!UBERON:0004732;7.69e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.99e-40,81;UBERON:0001049,3.74e-40,56;UBERON:0005068,3.74e-40,56;UBERON:0006241,3.74e-40,56;UBERON:0007135,3.74e-40,56;UBERON:0003528,7.24e-37,34;UBERON:0002020,7.24e-37,34;UBERON:0000073,6.42e-36,53;UBERON:0002616,6.42e-36,53;UBERON:0001016,1.14e-35,89;UBERON:0002791,1.48e-35,32;UBERON:0001869,1.48e-35,32;UBERON:0001893,3.00e-33,34;UBERON:0002619,6.04e-33,22;UBERON:0000956,7.82e-33,25;UBERON:0000203,7.82e-33,25;UBERON:0000955,3.13e-31,68;UBERON:0006238,3.13e-31,68;UBERON:0002780,4.99e-30,41;UBERON:0001890,4.99e-30,41;UBERON:0003080,4.99e-30,41;UBERON:0006240,4.99e-30,41;UBERON:0001950,5.37e-27,20;UBERON:0003075,1.98e-25,82;UBERON:0007284,1.98e-25,82;UBERON:0002346,5.99e-24,86;UBERON:0010371,2.67e-22,104;UBERON:0003056,1.00e-18,61;UBERON:0004121,1.16e-17,171;UBERON:0000924,1.16e-17,171;UBERON:0006601,1.16e-17,171;UBERON:0011216,6.52e-17,223;UBERON:0007023,6.95e-15,114;UBERON:0010314,2.23e-13,132;UBERON:0000349,5.50e-12,5;UBERON:0003076,4.78e-11,15;UBERON:0003057,4.78e-11,15;UBERON:0000025,7.00e-10,192;UBERON:0001954,1.19e-08,2;UBERON:0003022,1.19e-08,2;UBERON:0002421,1.19e-08,2;UBERON:0002600,1.19e-08,2;UBERON:0001871,1.41e-08,6;UBERON:0000369,2.10e-08,4;UBERON:0002435,2.10e-08,4;UBERON:0000204,2.10e-08,4;UBERON:0010082,2.10e-08,4;UBERON:0001872,1.51e-07,5;UBERON:0002021,2.45e-07,5;UBERON:0004733,3.46e-07,12;UBERON:0002028,3.46e-07,12;UBERON:0007277,3.46e-07,12 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0.408001382488506,0.940364164434263,1.43117993565528,0.136874425072884,0.125542639594803,2.13957536094264,1.23150884174919,1.49550484495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.719792448923265,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08189248444927,2.60279707715243,0,2.17771144934653,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.493217028184668,2.3948309234694,0,0,1.29875337426592,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,1.32656082487949,0,1.10579259931225,2.06883333267483,1.09692698576986,0,0,0.153900517007594,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0.247127877893006,0.104421949505455,0.471807930864739,1.60515529459758,1.40558667435203,0,0,0,0,1.20990716048664,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,1.32952671507345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.837847203816763,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,1.52411997718412,2.38568906942791,1.36203406111576,0,0,0,0,0,1.09349201984444,0,1.02447419488958,0.157363764404994,0,3.94432146532259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.79339561045614,0,0,0.640724475406168,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,9.58029987126429,1.77213635993397,1.70836770862748,0.876336514945499,0.573409195690071,1.22021956690538,0.869349641179368,0,0,2.12308764558307,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0.584580926518165,0.398594520940089,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1437183414724,1.09189682663981,0,1.43670473151436,1.23069818544453,5.29350562065608,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,1.0529445968896,0,0,0,0,0,0.675375846183947,2.34323429584154,0.620060389503552,1.33173201407204,3.82882366312754,0,0,0,0.255524855279191,0.535701835878287,0.336283722218824,0,0.455324382702595,0,1.95897778844825,0.171488009437418,1.35939465953663,0.526182188502793,0,0,0.078493092850514,1.25692471932802,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,1.87151570769685,0,0,7.79327966068824,0,1.35866559210006,0.308696632431779,0.218559560503957,0,0.245148321753905,0,2.35570160537934,0.594092800654172,2.113278637917,0,0.281951753939561,0.0644578879735772,0.699588091474503,0,0,0,1.46067277649303,0,0.860037498908708,0,0.679914901909147,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.724030971033267,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0,0.134704106029175,0.78894425931944,1.33064142618405,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p7@CHL1 | |||
}} |
Revision as of 16:54, 21 January 2014
Short description: | p7@CHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CHL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000421198_5end |
EntrezGene: | CHL1 |
HGNC: | 1939 |
UniProt: | C9JW79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 5.51e-09 | 2 |