FFCP PHASE1:Hg19::chr3:78719410..78719451,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000495961_5end | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_5_at_ROBO1_5end | |||
|id=chr3:78719410..78719451,- | |||
|ontology_enrichment_celltype=CL:0000047!6.88e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.20e-10;2!CL:0000540;2.78e-07;6!CL:0000404;2.78e-07;6!CL:0002319;4.58e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.95e-14,8;CL:0000540,2.78e-07,6;CL:0000031,2.78e-07,6;CL:0000404,2.78e-07,6;CL:0002319,4.91e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.91e-11;82!CL:0000031;2.78e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.47e-43!82;UBERON:0001049!8.29e-41!57;UBERON:0005068!8.29e-41!57;UBERON:0006241!8.29e-41!57;UBERON:0007135!8.29e-41!57;UBERON:0005743!3.58e-40!86;UBERON:0002780!1.20e-38!41;UBERON:0001890!1.20e-38!41;UBERON:0006240!1.20e-38!41;UBERON:0001893!1.87e-37!34;UBERON:0003080!2.00e-37!42;UBERON:0002020!5.78e-37!34;UBERON:0003528!5.78e-37!34;UBERON:0002791!4.67e-36!33;UBERON:0000073!5.89e-36!94;UBERON:0001016!5.89e-36!94;UBERON:0001869!3.84e-35!32;UBERON:0002616!4.07e-35!59;UBERON:0000955!6.15e-34!69;UBERON:0006238!6.15e-34!69;UBERON:0003075!1.69e-28!86;UBERON:0007284!1.69e-28!86;UBERON:0002346!7.04e-28!90;UBERON:0007023!1.59e-26!115;UBERON:0000956!1.97e-26!25;UBERON:0000203!1.97e-26!25;UBERON:0003056!4.03e-23!61;UBERON:0001950!8.17e-23!20;UBERON:0002619!1.04e-22!22;UBERON:0004121!4.90e-21!169;UBERON:0000924!5.57e-21!173;UBERON:0006601!5.57e-21!173;UBERON:0000033!1.42e-20!123;UBERON:0000153!1.47e-20!129;UBERON:0007811!1.47e-20!129;UBERON:0002420!1.80e-12!9;UBERON:0007245!1.80e-12!9;UBERON:0010009!1.80e-12!9;UBERON:0010011!1.80e-12!9;UBERON:0000454!1.80e-12!9;UBERON:0002308!6.40e-12!9;UBERON:0000125!6.40e-12!9;UBERON:0000025!6.38e-11!194;UBERON:0009663!7.24e-10!7;UBERON:0000200!1.99e-09!6;UBERON:0001871!3.53e-09!7;UBERON:0000119!1.12e-08!312;UBERON:0000483!1.43e-08!309;UBERON:0001872!5.12e-08!5;UBERON:0002298!6.90e-08!8;UBERON:0004111!9.15e-08!241;UBERON:0000477!9.87e-08!286;UBERON:0000475!3.28e-07!365;UBERON:0000922!5.96e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.44e-63;32!UBERON:0001893;3.63e-62;34!UBERON:0002791;6.45e-60;32!UBERON:0000956;9.30e-59;25!UBERON:0000203;9.30e-59;25!UBERON:0002780;2.62e-55;41!UBERON:0001890;2.62e-55;41!UBERON:0003528;6.82e-55;34!UBERON:0002020;6.82e-55;34!UBERON:0002619;6.56e-54;22!UBERON:0001950;4.93e-53;20!UBERON:0000073;1.13e-36;53!UBERON:0002616;1.13e-36;53!UBERON:0000955;1.11e-26;68!UBERON:0000200;3.22e-24;6!UBERON:0001017;3.06e-23;75!UBERON:0001016;6.41e-21;83!UBERON:0001871;9.88e-21;6!UBERON:0002420;1.37e-15;9!UBERON:0007245;1.37e-15;9!UBERON:0010009;1.37e-15;9!UBERON:0010011;1.37e-15;9!UBERON:0000454;1.37e-15;9!UBERON:0001872;1.72e-13;5!UBERON:0000349;2.85e-13;5!UBERON:0001870;3.90e-13;3!UBERON:0000369;1.19e-09;4!UBERON:0002435;1.19e-09;4!UBERON:0000204;1.19e-09;4!UBERON:0000007;1.96e-09;2!UBERON:0009663;2.40e-09;7!UBERON:0002702;2.86e-09;2!UBERON:0001876;3.91e-09;2!UBERON:0002771;7.69e-09;2!UBERON:0002360;7.69e-09;2!UBERON:0000094;7.69e-09;2!UBERON:0010743;7.69e-09;2!UBERON:0011216;8.93e-09;132!UBERON:0002021;3.65e-08;5!UBERON:0007023;9.21e-08;114!UBERON:0000125;2.77e-07;9!UBERON:0002308;2.77e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,9.54e-76,41;UBERON:0001890,9.54e-76,41;UBERON:0003080,9.54e-76,41;UBERON:0006240,9.54e-76,41;UBERON:0001893,2.61e-73,34;UBERON:0001869,3.26e-72,32;UBERON:0002791,3.68e-66,32;UBERON:0001017,3.28e-64,81;UBERON:0003528,4.85e-62,34;UBERON:0002020,4.85e-62,34;UBERON:0000956,8.30e-59,25;UBERON:0000203,8.30e-59,25;UBERON:0000073,2.34e-57,53;UBERON:0002616,2.34e-57,53;UBERON:0001016,4.22e-57,89;UBERON:0002619,4.65e-54,22;UBERON:0001049,5.72e-54,56;UBERON:0005068,5.72e-54,56;UBERON:0006241,5.72e-54,56;UBERON:0007135,5.72e-54,56;UBERON:0001950,3.95e-53,20;UBERON:0000955,1.90e-49,68;UBERON:0006238,1.90e-49,68;UBERON:0003056,4.73e-49,61;UBERON:0003075,1.72e-37,82;UBERON:0007284,1.72e-37,82;UBERON:0002346,1.95e-35,86;UBERON:0011216,3.46e-28,223;UBERON:0010371,3.91e-28,104;UBERON:0004121,7.82e-28,171;UBERON:0000924,7.82e-28,171;UBERON:0006601,7.82e-28,171;UBERON:0000200,3.89e-24,6;UBERON:0010314,3.99e-24,132;UBERON:0007023,5.81e-23,114;UBERON:0001871,7.76e-21,6;UBERON:0000025,7.94e-17,192;UBERON:0002420,7.28e-16,9;UBERON:0007245,7.28e-16,9;UBERON:0010009,7.28e-16,9;UBERON:0010011,7.28e-16,9;UBERON:0000454,7.28e-16,9;UBERON:0001872,1.59e-13,5;UBERON:0000349,1.87e-13,5;UBERON:0001870,3.83e-13,3;UBERON:0004111,6.12e-12,240;UBERON:0000369,8.18e-10,4;UBERON:0002435,8.18e-10,4;UBERON:0000204,8.18e-10,4;UBERON:0010082,8.18e-10,4;UBERON:0009663,1.62e-09,7;UBERON:0000007,1.97e-09,2;UBERON:0001876,2.99e-09,2;UBERON:0002702,3.25e-09,2;UBERON:0002771,7.71e-09,2;UBERON:0002360,1.47e-08,2;UBERON:0000094,1.47e-08,2;UBERON:0010743,1.47e-08,2;UBERON:0002021,4.39e-08,5;UBERON:0000483,9.29e-08,306;UBERON:0000119,1.30e-07,309;UBERON:0000125,2.05e-07,9;UBERON:0002308,2.05e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15224776835902,0.821246550437305,1.12988375635323,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.625592599359821,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,4.13552934676983,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,76.736576515184,70.2755210831157,10.05275456611,29.315346433511,13.3967137847164,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.364182336013434,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0.146508179271894,0,0.222886768554957,0,0,0,0,1.9882952955326,2.39138007897872,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.85536196323703,7.98455192004777,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,1.68835014075571,0,0.552896299656123,0,1.09692698576986,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0.104421949505455,1.28062152663286,0.802577647298789,2.34264445725339,0,0,0,0,0,28.7708395932661,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,2.72236422610278,0,0,0.213452994739353,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,1.11712960508902,0.458320848023367,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,1.77064427945048,0.160753148465019,0,0,0,0,2.79447960626913,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,1.31897010310274,0,0.387848869084652,0.52893040697076,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,2.98402782875445,3.54427271986794,1.95242023843141,1.3771002377715,0.573409195690071,0.998361463831671,0.931446044120752,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,1.10606748921385,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,1.60114149657094,0.352675943690684,0,2.63339822895484,0,0.159633859057151,2.05116364240755,23.4426677486198,1.45230230174858,2.42213468447777,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,3.03919130782776,0.781078098613847,1.65349437200947,1.71222687523548,20.7850427426923,0,0,0.703484977438482,0,0,0,2.42786241694653,2.50428410486427,0.0887023701626388,0,0,0.611727596791485,2.43359262182542,0,0,0,1.88538707899202,0,1.82631744101899,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0.237840181555137,3.72722070728568,0,0,0.0771741581079447,0.437119121007915,0,0,9.19138533696341,0.392616934229891,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.430018749454354,0,2.44769364687293,21.3811838266785,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0.620597975171371,0.213233981900981,0,0.129177819672012,0,0.224263725161227,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@ROBO1 | |||
}} |
Revision as of 19:54, 21 January 2014
Short description: | p5@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ROBO1_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | -18bp_to_ENST00000495961_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.95e-14 | 8 |
neuron | 2.78e-07 | 6 |
neuroblast | 2.78e-07 | 6 |
electrically signaling cell | 2.78e-07 | 6 |
neural cell | 4.91e-07 | 25 |