FFCP PHASE1:Hg19::chr4:4388245..4388289,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=P42857 | |||
|association_with_transcript=0bp_to_ENST00000433139_5end | |||
|coexpression_cluster_id=C4416 | |||
|description=CAGE_peak_2_at_D4S234E_5end | |||
|id=chr4:4388245..4388289,+ | |||
|ontology_enrichment_celltype=CL:0000221!5.22e-09!71;CL:0000148!5.28e-09!10;CL:0000541!5.28e-09!10;CL:0002077!7.89e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.07e-11;10!CL:0002077;1.43e-07;34!CL:0000540;1.89e-07;6!CL:0000404;1.89e-07;6!CL:0000147;7.12e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.94e-11,10;CL:0000541,3.94e-11,10;CL:0000221,8.46e-10,72;CL:0002077,2.17e-08,34;CL:0000540,1.95e-07,6;CL:0000031,1.95e-07,6;CL:0000404,1.95e-07,6;CL:0000047,4.46e-07,8;CL:0000133,5.38e-07,59;CL:0000147,6.96e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000031;1.89e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.88e-07;22!DOID:2994;2.88e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.69e-07,22;DOID:2994,2.69e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.87e-22!82;UBERON:0000073!9.52e-22!94;UBERON:0001016!9.52e-22!94;UBERON:0004121!1.07e-21!169;UBERON:0000924!1.15e-21!173;UBERON:0006601!1.15e-21!173;UBERON:0005743!4.11e-21!86;UBERON:0001049!2.66e-19!57;UBERON:0005068!2.66e-19!57;UBERON:0006241!2.66e-19!57;UBERON:0007135!2.66e-19!57;UBERON:0002616!5.98e-17!59;UBERON:0007023!2.02e-16!115;UBERON:0000955!2.46e-16!69;UBERON:0006238!2.46e-16!69;UBERON:0003075!1.13e-15!86;UBERON:0007284!1.13e-15!86;UBERON:0002346!1.81e-15!90;UBERON:0003080!8.56e-13!42;UBERON:0002780!1.39e-12!41;UBERON:0001890!1.39e-12!41;UBERON:0006240!1.39e-12!41;UBERON:0000153!3.22e-12!129;UBERON:0007811!3.22e-12!129;UBERON:0002020!7.36e-12!34;UBERON:0003528!7.36e-12!34;UBERON:0001869!2.39e-11!32;UBERON:0001893!2.98e-11!34;UBERON:0000033!4.04e-11!123;UBERON:0002791!8.13e-11!33;UBERON:0003056!3.34e-09!61;UBERON:0000956!4.96e-08!25;UBERON:0000203!4.96e-08!25;UBERON:0003076!5.17e-08!15;UBERON:0003057!5.17e-08!15;UBERON:0002619!5.87e-08!22;UBERON:0001950!1.13e-07!20;UBERON:0000064!1.81e-07!219;UBERON:0004733!4.94e-07!12;UBERON:0002028!4.94e-07!12;UBERON:0007277!4.94e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.07e-10;53!UBERON:0002616;4.07e-10;53!UBERON:0001950;7.35e-10;20!UBERON:0003528;8.51e-10;34!UBERON:0002020;8.51e-10;34!UBERON:0001869;1.30e-09;32!UBERON:0002619;2.14e-09;22!UBERON:0002791;7.76e-09;32!UBERON:0004733;7.91e-09;12!UBERON:0002028;7.91e-09;12!UBERON:0001893;1.87e-08;34!UBERON:0004732;7.33e-08;13!UBERON:0002780;1.04e-07;41!UBERON:0001890;1.04e-07;41!UBERON:0001017;1.13e-07;75!UBERON:0000956;1.27e-07;25!UBERON:0000203;1.27e-07;25!UBERON:0001016;1.43e-07;83!UBERON:0000955;2.03e-07;68!UBERON:0002680;8.36e-07;9!UBERON:0001895;8.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.35e-21,89;UBERON:0004121,2.09e-20,171;UBERON:0000924,2.09e-20,171;UBERON:0006601,2.09e-20,171;UBERON:0001017,1.57e-19,81;UBERON:0001049,1.85e-17,56;UBERON:0005068,1.85e-17,56;UBERON:0006241,1.85e-17,56;UBERON:0007135,1.85e-17,56;UBERON:0000073,7.88e-17,53;UBERON:0002616,7.88e-17,53;UBERON:0010371,3.41e-15,104;UBERON:0000955,4.71e-14,68;UBERON:0006238,4.71e-14,68;UBERON:0011216,1.06e-13,223;UBERON:0002346,6.48e-13,86;UBERON:0003075,9.02e-13,82;UBERON:0007284,9.02e-13,82;UBERON:0007023,1.44e-11,114;UBERON:0003528,5.56e-11,34;UBERON:0002020,5.56e-11,34;UBERON:0001869,7.03e-11,32;UBERON:0002780,1.89e-10,41;UBERON:0001890,1.89e-10,41;UBERON:0003080,1.89e-10,41;UBERON:0006240,1.89e-10,41;UBERON:0001950,7.90e-10,20;UBERON:0002791,8.59e-10,32;UBERON:0001893,8.82e-10,34;UBERON:0002619,2.22e-09,22;UBERON:0003076,5.95e-09,15;UBERON:0003057,5.95e-09,15;UBERON:0004733,1.33e-08,12;UBERON:0002028,1.33e-08,12;UBERON:0007277,1.33e-08,12;UBERON:0004732,1.17e-07,13;UBERON:0000956,1.30e-07,25;UBERON:0000203,1.30e-07,25;UBERON:0003056,6.11e-07,61;UBERON:0010314,6.38e-07,132 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,3.44027511102112,3.48900583986214,7.42700665242586,9.75937819445278,0,0,0,0,0,0,1.10808952269109,1.02000345622126,4.07491137921514,0.85870796139317,0.547497700291537,0.251085279189606,0,0,0,0,0.383829398097213,0.619264493264304,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0.651032612147555,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,2.360517241366,0.786021525498329,0.822405995998037,0,0.32592226663359,0,0,0,2.06224135232386,1.77227115666897,0,0,0,0,0,0,2.07601188426885,2.1403266247177,2.09071047609954,0,9.19729184644611,5.15441168223945,3.28925599625354,4.77848121486145,12.370585623272,4.75226022224187,2.86092726247768,1.91979916731628,9.99445812418767,4.97232229292435,4.10563998460523,0,2.13952156626806,2.31719046212478,2.43806866313962,1.34140171940727,1.15076305659177,0,0,0,0,0.486634870302636,0,0,0.087834785693126,1.57174890597255,2.5500670180478,5.93255108455087,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,1.69592382577203,4.19499436209906,2.20094433552054,2.71693456497854,0,0,0,0.402829317109147,0,0,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,3.48875241714027,0,0,0,0,0,0.560677600142307,0,0,1.24484414159907,2.69421344139376,3.10577615915572,1.51357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,4.3104229600808,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,2.31913023795956,0.545492241181669,1.14721838155602,14.3928973232923,14.3132149787204,12.6651397727775,7.77457912615278,16.9054970086671,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,2.94017422771084,0,0,0,0.441463099414651,0.122988438543114,0,4.93876284338815,4.49607013030478,3.82010095164197,3.51836091602412,0.325808305310325,0,0,0.463721619900307,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,1.00789276919316,1.41775097242386,0.626909658919938,3.48760726216754,1.15014803749563,0,0,0.207328115540772,0.144119953416961,0,19.9383388077411,21.0093634057053,59.780898077124,37.6359381249951,22.4163934093245,50.757976775622,120.332928137473,0.897048674762886,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,4.14636181608628,0,0,0,4.26470338491055,0,1.50719688529793,1.74306691720059,1.49959486773086,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.862510299438069,1.66845947163673,0.254094624222463,28.6307678486768,52.5836392688833,70.5243477057608,30.6210600793518,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.391602314925481,0,1.24060815673732,1.07857100409308,1.06727557803444,5.15316871458641,13.3148351608398,23.8888331730447,0,0.153461973288062,0.280660094433074,0.512556597022804,0.511707249066704,0,0,0,0,0,0,0,0.846016147141356,4.61164881697555,2.30202472339741,0.114814448164607,0,1.04899531967539,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,2.47298427954533,0.0915694648183434,0,4.59412430396938,3.90036147621913,0,0,0,0,0,0,0,0.0852266274161009,0,2.47927373041467,2.88285101047659,1.27612712494584,2.32662895967765,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,17.0878834704149,9.33425901102586,2.94531005864216,0,1.58510321173008,0,14.1413784335981,0,0,0,0.424216295861138,0,1.65409603063837,0,0,0,1.31178950409327,0,0,0,0,0.196498082026242,0.35667105148125,0,0,0,1.13841952129715,0,0.865999014529609,1.34060455107157,1.08890984861323,3.20088922641049,3.44404298136984,6.73885902670502,8.42517291719684,2.98640420269047,0,0.764637207142375,0.569647187174163,0.952927101831156,1.64544909234478,0,0,1.58625035258854,9.82781454372753,0.962479855263359,0,2.9728508020115,9.66603726942181,1.06712765022621,3.34795172730527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,4.05865624054073,10.9876931908076,5.83605333988541,4.97073823883149,2.2507106625682,0,0,7.17826387635178,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,1.479651084554,7.18449277040819,0,0,5.10224539890182,65.8725533403941,0,0,1.44999915086959,0,0,0.945550727071745,17.5819120353147,12.2473937620967,5.38237484293206,7.97167247232455,14.3509761964235,7.62908681585416,4.09143261745531,9.75307142546707,13.1631238292384,0,3.62501735124369,2.07765697960252,0,2.53620294826866,3.50054813198111,20.3170585494155,2.55200927785536,0.641183153813036,1.5991043280559,1.02193298195737,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.265372693510018,3.05515072466813,0,0,0,0.337005664903385,1.60515529459758,4.45102446878144,0,1.17398771359254,0,0,0,74.3756810762091,0.252746318513952,0.150323419414493,0.518440956986236,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,2.60339607502696,0,0,4.36816670605075,0,0,0,0,3.20063754411784,0,9.26521037200183,0,0,3.79864775735272,0.195551382734803,0,0,0.19980960958213,0,0.687219576995494,0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| |||
|short_description=p2@D4S234E | |||
}} |
Revision as of 23:59, 21 January 2014
Short description: | p2@D4S234E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_D4S234E_5end |
Coexpression cluster: | C4416_Melanocyte_Neurons_duodenum_brain_parietal_normal_occipital |
Association with transcript: | 0bp_to_ENST00000433139_5end |
EntrezGene: | D4S234E |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.94e-11 | 10 |
melanoblast | 3.94e-11 | 10 |
ectodermal cell | 8.46e-10 | 72 |
ecto-epithelial cell | 2.17e-08 | 34 |
neuron | 1.95e-07 | 6 |
neuroblast | 1.95e-07 | 6 |
electrically signaling cell | 1.95e-07 | 6 |
neuronal stem cell | 4.46e-07 | 8 |
neurectodermal cell | 5.38e-07 | 59 |
pigment cell | 6.96e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.69e-07 | 22 |
germ cell cancer | 2.69e-07 | 22 |