FFCP PHASE1:Hg19::chr5:72743793..72743855,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3802 | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=289bp_to_ENST00000499003_5end | |||
|coexpression_cluster_id=C2827 | |||
|description=CAGE_peak_4_at_FOXD1_5end | |||
|id=chr5:72743793..72743855,- | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-32!180;CL:0000057!1.70e-21!75;CL:0000548!1.74e-12!679;CL:0000004!1.74e-12!679;CL:0000255!1.74e-12!679;CL:0000012!7.07e-12!682;CL:0000183!1.15e-11!59;CL:0002620!1.52e-11!23;CL:0000359!5.84e-11!32;CL:0000192!3.24e-10!42;CL:0000514!3.24e-10!42;CL:0000680!6.73e-10!57;CL:0000056!6.73e-10!57;CL:0000355!6.73e-10!57;CL:0000187!1.42e-09!54;CL:0002539!1.20e-07!10;CL:0000220!3.87e-07!246;CL:0000144!4.54e-07!625;CL:0000393!5.76e-07!60;CL:0000211!5.76e-07!60;CL:0002371!7.25e-07!591;CL:0002321!8.67e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.34e-14;23!CL:0000359;2.49e-12;32!CL:0000057;1.57e-11;73!CL:0002539;6.56e-10;10!CL:0000192;5.82e-08;43!CL:0002320;1.80e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.88e-27,76;CL:0002620,2.17e-14,23;CL:0000359,4.72e-13,32;CL:0000192,2.90e-11,43;CL:0000514,2.90e-11,43;CL:0000680,2.28e-10,58;CL:0000056,2.28e-10,58;CL:0000355,2.28e-10,58;CL:0000187,3.56e-10,55;CL:0002539,4.69e-10,10;CL:0000393,3.87e-08,61;CL:0000211,3.87e-08,61;CL:0000048,2.85e-07,427;CL:0000723,3.16e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;5.82e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.11e-16!365;UBERON:0000914!1.65e-15!83;UBERON:0002329!1.65e-15!83;UBERON:0003077!1.65e-15!83;UBERON:0003059!1.65e-15!83;UBERON:0007282!1.65e-15!83;UBERON:0009618!1.65e-15!83;UBERON:0007285!1.65e-15!83;UBERON:0005256!9.20e-13!143;UBERON:0002100!1.72e-12!216;UBERON:0002199!2.14e-12!45;UBERON:0002416!2.14e-12!45;UBERON:0000486!7.27e-12!82;UBERON:0002097!7.53e-12!40;UBERON:0003102!1.83e-11!95;UBERON:0004290!1.98e-11!70;UBERON:0001134!2.02e-08!61;UBERON:0002036!2.02e-08!61;UBERON:0003082!2.02e-08!61;UBERON:0003104!2.31e-08!238;UBERON:0009142!2.31e-08!238;UBERON:0004237!1.20e-07!10;UBERON:0004695!1.20e-07!10;UBERON:0002111!1.20e-07!10;UBERON:0004178!1.20e-07!10;UBERON:0002385!1.30e-07!63;UBERON:0001015!1.30e-07!63;UBERON:0000383!1.30e-07!63;UBERON:0000481!4.51e-07!347;UBERON:0001637!9.31e-07!42;UBERON:0003509!9.31e-07!42;UBERON:0004572!9.31e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;6.56e-10;10!UBERON:0004695;6.56e-10;10!UBERON:0002111;6.56e-10;10!UBERON:0004178;6.56e-10;10!UBERON:0002097;2.79e-09;41!UBERON:0002199;1.08e-08;46!UBERON:0002416;1.08e-08;46!UBERON:0003102;1.26e-07;50!UBERON:0004573;3.56e-07;33!UBERON:0004571;3.56e-07;33!UBERON:0002384;4.67e-07;198!UBERON:0000075;6.21e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.21e-14,78;UBERON:0007524,1.80e-12,73;UBERON:0002199,1.87e-12,46;UBERON:0002416,1.87e-12,46;UBERON:0002329,2.79e-12,71;UBERON:0003059,2.79e-12,71;UBERON:0007282,2.79e-12,71;UBERON:0004290,2.79e-12,71;UBERON:0009618,2.79e-12,71;UBERON:0003077,6.49e-12,72;UBERON:0007285,6.49e-12,72;UBERON:0002097,6.68e-12,41;UBERON:0000486,2.22e-10,83;UBERON:0004237,4.69e-10,10;UBERON:0004695,4.69e-10,10;UBERON:0002111,4.69e-10,10;UBERON:0004178,4.69e-10,10;UBERON:0001637,9.07e-10,42;UBERON:0003509,9.07e-10,42;UBERON:0004572,9.07e-10,42;UBERON:0001134,5.55e-09,62;UBERON:0002036,5.55e-09,62;UBERON:0003082,5.55e-09,62;UBERON:0002385,2.29e-08,64;UBERON:0001015,2.29e-08,64;UBERON:0000383,2.29e-08,64;UBERON:0004573,2.95e-08,33;UBERON:0004571,2.95e-08,33;UBERON:0003102,3.56e-08,99;UBERON:0003104,4.55e-08,160;UBERON:0009142,4.55e-08,160;UBERON:0005256,1.75e-07,122;UBERON:0002100,2.26e-07,199;UBERON:0000075,5.06e-07,16 | |||
|phase1_expression=1.2717486548939,1.49870366723688,1.55049844505568,4.00293193412522,2.68176656656373,3.48935409640147,2.53299878168311,0.631719873426831,0,0.491467873003018,0,0.436882744260345,3.9565046734268,2.59909341216098,1.98838425436749,4.03395087871065,6.62963980826375,5.11217063271161,3.90346239032406,1.47745269692145,1.83600622119828,0.940364164434263,0,0.684372125364421,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0.6024118375565,1.47901604066715,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,2.1686349143074,1.50401373190767,2.60723734129483,0,2.43317435151318,1.70162670895322,1.55210578223795,2.3715392137144,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,5.19185097824777,5.56118559415519,2.29469296599051,1.77334191099179,2.80338800071154,4.2699598291882,3.94668077467456,0,0.134710672069688,0.163461903113459,3.78393569112329,7.49028701823999,1.87457145467037,2.49728061464256,1.1409436430889,2.39117888882882,2.3486899728753,1.94247533241758,0.98315564691574,1.22492502752936,2.21101771161182,2.47981874821837,0,5.19260551484969,0,0.718618141816238,1.5150250255866,2.00189631795143,0.554128230968366,5.70670907145089,7.04921930337745,2.25357088359895,1.02088964844019,7.35497506324334,6.19316427573846,4.02670612203168,6.60200411385685,3.19462840639161,2.31876486041066,2.79175284497385,6.91982962189192,5.06672426838233,6.81571190459109,1.84099797284599,1.61646056818812,9.58525899794859,5.44061330429257,5.4259389539356,0,0.545492241181669,0.860413786167011,0,0,0.116193942869518,0,0.504641701751257,0,6.25798129319264,4.5026865673502,6.90674606762403,1.39310378409594,0.721879481669586,0.946454400318751,0.842923450390509,0.241011029883482,0.330881918197182,1.30727666455444,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,0,12.6217596423101,0,0,0,0,0,0,0.245976877086227,1.3725424823882,0.548751427043128,1.1240175325762,1.80952150340936,0.740707561268237,1.95484983186195,1.03993478527958,4.3299402607582,0.695582429850461,2.81780866165972,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,3.19166043577833,3.68615252830205,2.86587272649115,2.3250715081117,2.30029607499127,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,3.1396703616701,7.84728123899904,3.8135908626894,0.904902010304444,0,0,0.797814349754612,1.04007436911366,2.05765899409714,2.83698264046557,3.46348832720929,1.00084595560703,0.542621605391443,0,0,0.710783897485092,0,0.602878754119172,1.74306691720059,1.79951384127703,0,0,0,1.19812427745791,1.14861935834114,0,1.73737568001095,0.205476322550383,1.25342674267927,0,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,3.43536176813592,4.00136416847742,1.89885516589815,1.87173775377726,4.63915370872621,0.788512075169673,1.05427273493442,2.10662269809403,4.5481500811197,1.03473071292505,4.64957918974806,9.21845842708516,0.868836144680828,53.2579148298654,47.3537924858981,0,0,0,0,1.66435439510497,0,2.48107807818777,3.99001130548962,6.73584226639377,1.53766979106841,4.60536524160033,2.57366273829772,1.48418066444991,2.92998418225046,2.30830242907065,1.56041596426237,2.07701771673448,0.929683027679674,0.241718899183244,2.6065841139427,0.184161977871793,0.34444334449382,0.546273504020151,0.262248829918848,1.80479845162965,2.31046011313244,4.70609861506113,0,1.37217117560738,1.13733384070897,0.340187410553031,6.47747748306418,13.880452742126,7.85744668877173,7.02365683396795,0.764628819135115,0.831076008928724,1.79099803777743,0,0,0.769350375349168,1.31205858279882,0.650756789328606,0,1.92295876118521,0.907604499126468,0.574265537996172,0,0,1.83674364755032,0.770243085573222,2.14905144616581,1.65403886981437,0.537101224341368,0.580066775656914,2.13066568540252,2.04773681987496,0,0,0,0.2023155617111,21.3828952676751,18.2591161161771,4.8792608911242,1.84820148105653,7.45228442443831,11.3091288969759,0.37064843820784,0.143124886741991,7.44316738719335,0.632758849437452,0.571890581771475,3.83846686967001,2.1396949401696,1.90921948755562,0,0,0,0,5.0545620393329,0,1.68503382495592,0.975267478179181,1.70599442741899,8.45201174054043,0.409499734223957,0.848432591722276,2.26016233240486,2.2054613741845,1.32687795048244,1.75380354101505,2.89387767133344,3.27947376023316,2.23201414658974,5.26699946769575,4.22543403798362,1.29070216983646,1.27723753317057,2.85336841185,0.354761064070598,1.47775344708365,0.658589785919804,0.75894634753143,1.04980416073495,0.48111056362756,0,1.08890984861323,0.188287601553558,0.86101074534246,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,1.3420566473545,1.33479313369527,0,0,0,0.540911356951966,0.33307196799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| |||
|short_description=p4@FOXD1 | |||
}} |
Revision as of 05:55, 22 January 2014
Short description: | p4@FOXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXD1_5end |
Coexpression cluster: | C2827_Pericytes_Osteoblast_Smooth_astrocytoma_Fibroblast_transitionalcell_alveolar |
Association with transcript: | 289bp_to_ENST00000499003_5end |
EntrezGene: | FOXD1 |
HGNC: | 3802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.88e-27 | 76 |
skin fibroblast | 2.17e-14 | 23 |
vascular associated smooth muscle cell | 4.72e-13 | 32 |
smooth muscle cell | 2.90e-11 | 43 |
smooth muscle myoblast | 2.90e-11 | 43 |
muscle precursor cell | 2.28e-10 | 58 |
myoblast | 2.28e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.28e-10 | 58 |
muscle cell | 3.56e-10 | 55 |
aortic smooth muscle cell | 4.69e-10 | 10 |
electrically responsive cell | 3.87e-08 | 61 |
electrically active cell | 3.87e-08 | 61 |
multi fate stem cell | 2.85e-07 | 427 |
somatic stem cell | 3.16e-07 | 433 |