FFCP PHASE1:Hg19::chr5:168271822..168271868,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000521150,uc003mac.1_5end | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_5_at_SLIT3_5end | |||
|id=chr5:168271822..168271868,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;7.99e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.26e-12;3!UBERON:0006601;2.97e-09;82!UBERON:0006241;8.85e-07;3!UBERON:0003057;8.85e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.74e-10;2!DOID:169;2.07e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.54e-10,2;DOID:169,2.07e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.76e-55!115;UBERON:0001049!4.81e-41!57;UBERON:0005068!4.81e-41!57;UBERON:0006241!4.81e-41!57;UBERON:0007135!4.81e-41!57;UBERON:0000073!1.07e-34!94;UBERON:0001016!1.07e-34!94;UBERON:0000955!1.49e-34!69;UBERON:0006238!1.49e-34!69;UBERON:0002616!1.73e-34!59;UBERON:0003075!2.63e-34!86;UBERON:0007284!2.63e-34!86;UBERON:0001017!2.28e-32!82;UBERON:0002346!3.89e-32!90;UBERON:0005743!6.00e-32!86;UBERON:0002020!8.22e-32!34;UBERON:0003528!8.22e-32!34;UBERON:0002780!2.81e-31!41;UBERON:0001890!2.81e-31!41;UBERON:0006240!2.81e-31!41;UBERON:0001893!3.84e-31!34;UBERON:0003080!2.54e-30!42;UBERON:0002791!9.41e-30!33;UBERON:0001869!7.75e-29!32;UBERON:0002619!9.86e-26!22;UBERON:0003056!9.48e-23!61;UBERON:0001950!1.60e-22!20;UBERON:0000956!4.71e-22!25;UBERON:0000203!4.71e-22!25;UBERON:0004121!7.17e-21!169;UBERON:0000924!5.22e-20!173;UBERON:0006601!5.22e-20!173;UBERON:0000033!8.55e-18!123;UBERON:0000153!3.11e-17!129;UBERON:0007811!3.11e-17!129;UBERON:0000025!4.56e-13!194;UBERON:0003076!1.33e-11!15;UBERON:0003057!1.33e-11!15;UBERON:0000064!1.78e-11!219;UBERON:0002298!2.16e-11!8;UBERON:0002308!2.76e-11!9;UBERON:0000125!2.76e-11!9;UBERON:0004732!5.37e-11!13;UBERON:0001871!1.53e-10!7;UBERON:0000200!1.72e-10!6;UBERON:0004111!6.79e-10!241;UBERON:0004733!1.66e-09!12;UBERON:0002028!1.66e-09!12;UBERON:0007277!1.66e-09!12;UBERON:0000483!1.25e-08!309;UBERON:0000477!1.54e-08!286;UBERON:0000481!2.15e-08!347;UBERON:0000119!2.16e-08!312;UBERON:0000062!2.27e-08!511;UBERON:0002420!2.89e-08!9;UBERON:0007245!2.89e-08!9;UBERON:0010009!2.89e-08!9;UBERON:0010011!2.89e-08!9;UBERON:0000454!2.89e-08!9;UBERON:0009663!5.61e-08!7;UBERON:0000988!5.51e-07!3;UBERON:0001896!6.92e-07!3;UBERON:0005290!6.92e-07!3;UBERON:0010096!6.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.95e-25;6!UBERON:0004732;1.13e-19;13!UBERON:0004733;1.76e-16;12!UBERON:0002028;1.76e-16;12!UBERON:0000988;1.02e-13;3!UBERON:0001896;1.76e-13;3!UBERON:0005290;1.76e-13;3!UBERON:0000073;4.39e-13;53!UBERON:0002616;4.39e-13;53!UBERON:0002619;5.93e-10;22!UBERON:0003528;9.97e-10;34!UBERON:0002020;9.97e-10;34!UBERON:0002148;1.26e-09;2!UBERON:0006331;1.26e-09;2!UBERON:0009662;1.26e-09;2!UBERON:0000007;1.70e-09;2!UBERON:0001954;3.32e-09;2!UBERON:0003022;3.32e-09;2!UBERON:0002421;3.32e-09;2!UBERON:0002600;3.32e-09;2!UBERON:0000013;7.99e-09;5!UBERON:0002410;7.99e-09;5!UBERON:0000956;1.16e-08;25!UBERON:0000203;1.16e-08;25!UBERON:0001016;1.98e-08;83!UBERON:0000010;3.91e-08;8!UBERON:0002780;7.37e-08;41!UBERON:0001890;7.37e-08;41!UBERON:0000349;7.93e-08;5!UBERON:0002680;1.08e-07;9!UBERON:0001895;1.08e-07;9!UBERON:0002791;1.13e-07;32!UBERON:0007100;1.64e-07;25!UBERON:0000955;2.22e-07;68!UBERON:0001869;2.61e-07;32!UBERON:0002240;8.85e-07;3!UBERON:0005174;8.85e-07;3!UBERON:0001137;8.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.95e-25,6;UBERON:0003075,5.26e-25,82;UBERON:0007284,5.26e-25,82;UBERON:0001049,3.22e-24,56;UBERON:0005068,3.22e-24,56;UBERON:0006241,3.22e-24,56;UBERON:0007135,3.22e-24,56;UBERON:0002346,1.41e-23,86;UBERON:0001016,2.26e-22,89;UBERON:0007023,1.10e-21,114;UBERON:0003076,1.56e-21,15;UBERON:0003057,1.56e-21,15;UBERON:0000073,2.09e-20,53;UBERON:0002616,2.09e-20,53;UBERON:0004732,1.10e-19,13;UBERON:0010371,1.68e-18,104;UBERON:0010314,1.13e-17,132;UBERON:0001017,7.08e-17,81;UBERON:0000955,1.22e-16,68;UBERON:0006238,1.22e-16,68;UBERON:0004733,1.72e-16,12;UBERON:0002028,1.72e-16,12;UBERON:0007277,1.72e-16,12;UBERON:0000988,1.04e-13,3;UBERON:0001896,1.73e-13,3;UBERON:0005290,1.73e-13,3;UBERON:0010096,1.73e-13,3;UBERON:0011216,2.19e-12,223;UBERON:0004121,4.07e-12,171;UBERON:0000924,4.07e-12,171;UBERON:0006601,4.07e-12,171;UBERON:0003528,7.85e-12,34;UBERON:0002020,7.85e-12,34;UBERON:0002619,6.21e-10,22;UBERON:0003056,1.15e-09,61;UBERON:0002148,1.29e-09,2;UBERON:0006331,1.29e-09,2;UBERON:0009662,1.29e-09,2;UBERON:0000007,1.73e-09,2;UBERON:0002780,1.80e-09,41;UBERON:0001890,1.80e-09,41;UBERON:0003080,1.80e-09,41;UBERON:0006240,1.80e-09,41;UBERON:0001954,3.39e-09,2;UBERON:0003022,3.39e-09,2;UBERON:0002421,3.39e-09,2;UBERON:0002600,3.39e-09,2;UBERON:0000013,7.99e-09,5;UBERON:0002410,7.99e-09,5;UBERON:0000956,1.21e-08,25;UBERON:0000203,1.21e-08,25;UBERON:0000025,1.97e-08,192;UBERON:0002791,2.65e-08,32;UBERON:0001869,2.65e-08,32;UBERON:0000010,3.91e-08,8;UBERON:0000349,9.05e-08,5;UBERON:0001893,9.65e-08,34;UBERON:0002680,1.07e-07,9;UBERON:0001895,1.07e-07,9;UBERON:0010092,1.07e-07,9;UBERON:0007100,7.25e-07,27;UBERON:0002240,9.10e-07,3;UBERON:0005174,9.10e-07,3;UBERON:0001137,9.10e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.932949495138334,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.774054819518572,0,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,1.60515529459758,0,0,0,0,0,32.6674933331392,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0.600420288709789,0.136905378891993,0,0,0,30.4417817386757,1.3749625440701,0.717873024576814,6.38972801596772,10.3014251552777,4.01708623395371,8.33075058835406,0,0,0,0,0,0,0,3.97614844904652,2.04305109167363,0,0,0,0,0,1.03274246318642,0,2.52178263357434,6.24209598806477,0,0.179287339332845,0,34.3053756659216,0,0,0,0,0,0,0,0,0,0.58620893471233,0,49.3860893301123,2.24795422962573,0,0,0,0,0.414239055347196,0,0,0,0,1.08803560673895,0.5013797880454,0,0,0,0.886068179966986,0.610131324509816,1.6274820991845,4.58727356552057,4.10437490686353,10.3080028882697,0,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0.303859956177382,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,90.2934261403781,113.216051966516,0,193.191849961673,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.957803154342908,0.205116364240755,0.252071696221718,0.414943514785307,0.484426936895553,4.28308260777463,0,0,0,0,0,0,0,0.300841313397029,0,1.56302802246618,0,0,0,0.810451015420736,0,1.44680757550829,0.570742291745161,0.546974809018219,0,0,0,0,0,0,3.64179362541979,7.05752793189023,0.0887023701626388,0,0,12.5744006007139,0.657727735628491,0,0,0.235479278551542,2.35673384874003,0,3.65263488203798,0,0,1.28657779517981,1.89616334079272,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,4.61750170330802,0,0.0771741581079447,1.31135736302374,0,0,0,6.0855624805633,0,23.6687207446704,0,1.87967835959707,5.28554681383333,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.951880862672806,0,28.0384225473162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,1.21270313374932,0,0,0.0673520530145875,0.358611026963382,0.99798106963804,0,0,0,0,7.03922827210363,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p5@SLIT3 | |||
}} |
Revision as of 08:55, 22 January 2014
Short description: | p5@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLIT3_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_ENST00000521150, uc003mac.1_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 9.54e-10 | 2 |
neuroendocrine tumor | 2.07e-07 | 6 |