FFCP PHASE1:Hg19::chr6:36922281..36922298,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21245 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXB8 | |||
|association_with_transcript=72bp_to_ENST00000373674,NM_153370,uc003omz.1,uc003ona.2,uc003onb.2_5end | |||
|coexpression_cluster_id=C796 | |||
|description=CAGE_peak_7_at_PI16_5end | |||
|id=chr6:36922281..36922298,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.99e-22!25;CL:0000827!4.99e-22!25;CL:0000791!7.88e-22!18;CL:0000789!7.88e-22!18;CL:0002420!7.88e-22!18;CL:0002419!7.88e-22!18;CL:0000790!7.88e-22!18;CL:0000838!4.54e-14!52;CL:0000542!1.12e-13!53;CL:0000051!1.12e-13!53;CL:0000625!3.94e-13!11;CL:0000624!3.07e-12!6;CL:0002334!4.97e-08!12;CL:0002579!2.26e-07!3;CL:0002580!2.77e-07!3;CL:1000306!3.48e-07!4;CL:0002547!3.48e-07!4;CL:0000898!4.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.17e-25;12!CL:0000084;1.43e-23;25!CL:0002580;9.64e-20;3!CL:0002579;9.64e-20;3!CL:0000624;3.88e-17;6!CL:0000791;2.42e-16;18!CL:0000789;2.42e-16;18!CL:0002419;2.42e-16;18!CL:0000898;1.70e-09;3!CL:0002581;1.85e-07;1!CL:0000895;1.85e-07;1!CL:0000542;6.04e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.10e-25,12;CL:0000084,1.56e-23,25;CL:0000827,1.56e-23,25;CL:0002579,7.26e-20,3;CL:0002580,1.37e-19,3;CL:0000624,5.11e-17,6;CL:0000791,2.34e-16,18;CL:0000789,2.34e-16,18;CL:0002420,2.34e-16,18;CL:0002419,2.34e-16,18;CL:0000790,2.34e-16,18;CL:0000838,2.06e-10,52;CL:0000542,3.49e-10,53;CL:0000051,3.49e-10,53;CL:0000898,2.05e-09,3;CL:0002581,1.69e-07,1;CL:0000810,2.47e-07,1;CL:0000895,2.47e-07,1;CL:0002436,2.47e-07,1;CL:0002427,2.47e-07,1;CL:0002428,2.47e-07,1;CL:0002429,2.47e-07,1;CL:0002433,2.47e-07,1;CL:0002431,2.47e-07,1;CL:0002432,2.47e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-16;18!CL:0002427;1.85e-07;1!CL:0000051;6.04e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.85e-07;1!DOID:0060061;1.85e-07;1!DOID:8691;1.85e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.17e-07,1;DOID:0060061,2.17e-07,1;DOID:8691,2.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!5.84e-09!12;UBERON:0000042!5.84e-09!12;UBERON:0000178!9.70e-09!15;UBERON:0000179!9.70e-09!15;UBERON:0000463!9.70e-09!15;UBERON:0000415!3.48e-07!4;UBERON:0007240!3.48e-07!4;UBERON:0005742!3.48e-07!4;UBERON:0005734!3.48e-07!4;UBERON:0004664!3.48e-07!4;UBERON:0004663!3.48e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.43e-11;9!UBERON:0000042;1.43e-11;9!UBERON:0003688;3.88e-10;6!UBERON:0002358;3.88e-10;6!UBERON:0003684;3.88e-10;6!UBERON:0001178;3.88e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.38e-10,6;UBERON:0002358,3.38e-10,6;UBERON:0003684,3.38e-10,6;UBERON:0001178,3.38e-10,6;UBERON:0004457,9.52e-09,12;UBERON:0000042,9.52e-09,12 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852139206383318,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,1.180258620683,0.393010762749165,2.67281948699362,1.5046784585161,0.651844533267181,0,0,1.33692548262208,8.83817722424511,9.08288967792847,5.41607727530031,2.81800903396485,0.910415432919148,0,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.566546713487831,1.14966148080576,1.03088233644789,0.253019692019503,0.637130828648193,0.651083453856419,0,1.35517607169996,0.639933055772092,0,1.65744076430812,4.10563998460523,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,3.96972492510043,1.07423381301644,2.24528075546459,3.45975702990393,2.04682899626681,1.60853921143608,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,1.32687795048244,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,2.63435914367922,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.952927101831156,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,31.0881231821204,0,5.1706449935739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.302461847526478,0.932623203496683,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,1.54400723580486,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,1.07214816264985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@PI16 | |||
}} |
Revision as of 11:42, 22 January 2014
Short description: | p7@PI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PI16_5end |
Coexpression cluster: | C796_acute_chronic_spleen_CD4_CD19_thymus_hairy |
Association with transcript: | 72bp_to_ENST00000373674, NM_153370, uc003omz.1, uc003ona.2, uc003onb.2_5end |
EntrezGene: | PI16 |
HGNC: | 21245 |
UniProt: | Q6UXB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.10e-25 | 12 |
T cell | 1.56e-23 | 25 |
pro-T cell | 1.56e-23 | 25 |
omentum preadipocyte | 7.26e-20 | 3 |
preadipocyte of the breast | 1.37e-19 | 3 |
CD4-positive, alpha-beta T cell | 5.11e-17 | 6 |
mature alpha-beta T cell | 2.34e-16 | 18 |
alpha-beta T cell | 2.34e-16 | 18 |
immature T cell | 2.34e-16 | 18 |
mature T cell | 2.34e-16 | 18 |
immature alpha-beta T cell | 2.34e-16 | 18 |
lymphoid lineage restricted progenitor cell | 2.06e-10 | 52 |
lymphocyte | 3.49e-10 | 53 |
common lymphoid progenitor | 3.49e-10 | 53 |
naive T cell | 2.05e-09 | 3 |
perirenal preadipocyte | 1.69e-07 | 1 |
CD4-positive, alpha-beta thymocyte | 2.47e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.47e-07 | 1 |
mature CD4 single-positive thymocyte | 2.47e-07 | 1 |
resting double-positive thymocyte | 2.47e-07 | 1 |
double-positive blast | 2.47e-07 | 1 |
CD69-positive double-positive thymocyte | 2.47e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.47e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.47e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.47e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.38e-10 | 6 |
peritoneum | 3.38e-10 | 6 |
abdominal cavity | 3.38e-10 | 6 |
visceral peritoneum | 3.38e-10 | 6 |
cavity lining | 9.52e-09 | 12 |
serous membrane | 9.52e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.17e-07 | 1 |
cutaneous T cell lymphoma | 2.17e-07 | 1 |
mycosis fungoides | 2.17e-07 | 1 |