FFCP PHASE1:Hg19::chr9:130533558..130533610,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_uc004bsa.2,uc004bsb.2_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_SH2D3C_5end | |||
|id=chr9:130533558..130533610,- | |||
|ontology_enrichment_celltype=CL:0000115!1.76e-18!35;CL:0002139!5.27e-18!24;CL:0000071!6.69e-14!18;CL:0002546!6.69e-14!18;CL:0002078!1.22e-12!44;CL:1000413!1.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.94e-24;24!CL:0000115;3.92e-23;36!CL:0000071;1.73e-18;18!CL:0002078;2.77e-12;45!CL:1000413;6.80e-10;9!CL:0000213;1.44e-07;58!CL:0000215;1.44e-07;58!CL:0002543;2.93e-07;6!CL:0002138;3.44e-07;6!CL:0002544;3.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.85e-27,36;CL:0002139,4.07e-24,24;CL:0002078,1.21e-18,45;CL:0000071,1.76e-18,18;CL:0002546,1.76e-18,18;CL:0000213,2.22e-11,58;CL:0000215,2.22e-11,58;CL:1000413,6.93e-10,9;CL:0002543,2.93e-07,6;CL:0005020,3.48e-07,6;CL:0002138,3.48e-07,6;CL:0005022,3.48e-07,6;CL:0002544,3.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.73e-18;18!CL:0005022;3.44e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-37!115;UBERON:0001986!6.69e-14!18;UBERON:0004638!6.69e-14!18;UBERON:0004852!6.69e-14!18;UBERON:0001049!3.04e-12!57;UBERON:0005068!3.04e-12!57;UBERON:0006241!3.04e-12!57;UBERON:0007135!3.04e-12!57;UBERON:0002616!3.66e-12!59;UBERON:0001017!7.59e-11!82;UBERON:0003080!9.23e-11!42;UBERON:0005743!1.14e-10!86;UBERON:0000955!1.17e-10!69;UBERON:0006238!1.17e-10!69;UBERON:0000487!1.31e-10!22;UBERON:0002780!2.79e-10!41;UBERON:0001890!2.79e-10!41;UBERON:0006240!2.79e-10!41;UBERON:0006914!9.02e-10!25;UBERON:0002020!7.10e-09!34;UBERON:0003528!7.10e-09!34;UBERON:0001893!1.03e-08!34;UBERON:0000073!1.52e-08!94;UBERON:0001016!1.52e-08!94;UBERON:0004111!1.62e-08!241;UBERON:0002791!1.81e-08!33;UBERON:0001869!3.25e-08!32;UBERON:0003075!7.19e-08!86;UBERON:0007284!7.19e-08!86;UBERON:0003915!1.25e-07!9;UBERON:0004700!1.25e-07!9;UBERON:0001917!1.25e-07!9;UBERON:0000477!3.41e-07!286;UBERON:0000025!5.33e-07!194;UBERON:0002619!5.94e-07!22;UBERON:0002346!8.64e-07!90;UBERON:0000956!9.82e-07!25;UBERON:0000203!9.82e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.73e-18;18!UBERON:0001986;1.73e-18;18!UBERON:0004852;1.73e-18;18!UBERON:0000487;1.30e-13;22!UBERON:0007023;3.76e-12;114!UBERON:0006914;4.89e-11;25!UBERON:0003915;6.80e-10;9!UBERON:0004700;6.80e-10;9!UBERON:0001917;6.80e-10;9!UBERON:0002780;2.21e-08;41!UBERON:0001890;2.21e-08;41!UBERON:0001893;1.24e-07;34!UBERON:0002619;1.94e-07;22!UBERON:0000490;2.13e-07;33!UBERON:0003528;2.53e-07;34!UBERON:0002020;2.53e-07;34!UBERON:0002791;2.73e-07;32!UBERON:0001869;2.95e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.00e-47,114;UBERON:0004638,1.76e-18,18;UBERON:0001986,1.76e-18,18;UBERON:0004852,1.76e-18,18;UBERON:0004111,2.17e-15,240;UBERON:0000487,1.33e-13,22;UBERON:0000025,3.03e-13,192;UBERON:0001049,5.49e-12,56;UBERON:0005068,5.49e-12,56;UBERON:0006241,5.49e-12,56;UBERON:0007135,5.49e-12,56;UBERON:0006914,4.95e-11,25;UBERON:0000073,5.25e-11,53;UBERON:0002616,5.25e-11,53;UBERON:0002780,1.17e-10,41;UBERON:0001890,1.17e-10,41;UBERON:0003080,1.17e-10,41;UBERON:0006240,1.17e-10,41;UBERON:0003915,6.93e-10,9;UBERON:0004700,6.93e-10,9;UBERON:0001917,6.93e-10,9;UBERON:0001017,1.06e-09,81;UBERON:0000955,1.67e-09,68;UBERON:0006238,1.67e-09,68;UBERON:0001009,4.79e-09,112;UBERON:0003528,9.15e-09,34;UBERON:0002020,9.15e-09,34;UBERON:0001893,1.41e-08,34;UBERON:0002791,5.31e-08,32;UBERON:0001869,6.30e-08,32;UBERON:0004535,8.29e-08,109;UBERON:0000055,1.28e-07,68;UBERON:0003075,1.78e-07,82;UBERON:0007284,1.78e-07,82;UBERON:0001016,2.04e-07,89;UBERON:0002619,2.27e-07,22 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0.738726348460727,0.204000691244253,0,0.572471974262113,0.136874425072884,1.38096903554283,0.61130724598361,1.14940825229924,0.629686250509434,0.786728553697808,0,0.154816123316076,0,1.8072355126695,0,0.309868802321207,0,0.587200878669695,0.553995408531877,0.802177789880567,0.434021741431704,2.91090116511902,4.21061765824673,3.8636335145128,0.436194716338694,0.377875943688809,1.4555043671269,0.697287110717054,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.752969358170419,0,0.449446968890169,0,0,0,0.659702600373432,0.398927315243264,0,0,0,0,0.502497330513487,1.0429658368404,0.65156653411535,0,0.368277635987565,0.949387162322653,0,0.212604299965044,0.209658645508376,0.673971786878971,0.150176892841506,0,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,3.96513985737078,0.560508562981536,1.31692042387539,0,1.17903228824749,1.43921049299656,4.68122187093899,0.651844533267181,0.473447805734733,1.94826728407911,9.02424700769906,1.76763544484902,1.55073726208535,2.43723477388514,6.40456598628376,7.93362020115257,3.94650971048823,7.18510046243206,4.63684937176084,0.14828656316206,0.267540828089713,0,4.41906436520508,0.383220493601921,1.03088233644789,0.506039384039006,1.91139248594458,1.95325036156926,0.950452044448374,1.50575119077773,1.4078527226986,1.24930726552346,1.65744076430812,1.64225599384209,0.201606743224732,0.534880391567015,0,2.43806866313962,2.68280343881454,2.68511379871414,0,0,0,0,0,0.472674085820339,0,0.263504357079378,9.03755620934217,0,0,2.59637914923747,2.96020553408754,3.32394901297163,0.238490624305342,0,0,45.3178288796088,49.0333719210491,74.6352078456328,32.2225526896685,41.1109447485708,41.5428243329502,53.0847215003499,66.1546903473482,59.7687321313673,58.910827846582,92.6507429351038,72.2258500432587,132.525697248656,58.0907666946473,49.4186588207873,43.4889676743468,42.6605807989723,36.2608967156298,78.1914851076005,100.622159914222,73.8303028039541,6.58902087180316,11.6334079244498,1.74437620857014,0,0,0,0,0.709336764396714,0,2.1349799145941,0.49333509683432,1.55605517699883,4.71487352243908,4.08654757783647,3.93529311876822,1.72852777344,0,0,7.41613368007784,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.567160915800105,0.358779271377724,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.609868530647977,0.265059536642971,0.69716365721711,0.932949495138334,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0.38474715694639,98.9128309197029,64.5112159495851,2.8810180793198,2.94017422771084,0,0.982827216677626,8.86184860022106,0.441463099414651,0,0,0,0,0,0.462942225792648,0,0,0,0.34779121492523,0,60.2008087163678,42.5946671570482,35.0067640111661,0,0,7.87894419479671,3.7440682422278,5.7966153292604,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,1.97065295158377,8.62874653329615,6.42717158176393,6.05303804351238,9.72066737383126,0.063497894292169,0.763976851116555,0,1.71072446022705,0,0,0,22.8747412064536,6.10344096366592,11.2940960164263,0,7.15312891703765,4.22651376278,0,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,3.25736184293735,1.06617584622764,0,0,0,0,2.43247561282381,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0.672510863961164,1.18218456121156,0.431255149719035,0.641715181398742,0.254094624222463,1.30139853857622,0,0.335032530668698,0,2.99602809578873,2.99161459204025,6.21623270154053,0,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,6.46143819627044,3.0882908142977,0.413536052245775,0.647142602455851,0.74709290462411,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,106.909381026643,75.861792553326,27.6372372610738,174.276795540027,1.08378575017541,0,0,0,0,0.657779629937804,0.261435451024901,0.256450125116389,0,0.325378394664303,7.93415789687461,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0.616194468458578,0.15350367472613,0.137836572484531,0.751941714077915,0.435050081742686,0.340906509664404,0.356128142586949,0.165284915360978,0.384380134730212,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,5.58237554039501,0.632758849437452,0.190630193923825,0,0,0,0,0,0.54907405947211,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,1.8589409885985,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,1.34060455107157,2.17781969722645,7.81393546447267,0,0,0,0,2.53723804616085,0.764637207142375,3.41788312304498,2.1440859791201,2.87953591160336,3.8908398671563,1.62009431171434,2.37937552888281,0.534120355637366,0,0.490080431962063,0,0.721346064882224,0,0,0,3.2555912922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| |||
|short_description=p1@SH2D3C | |||
}} |
Revision as of 03:24, 23 January 2014
Short description: | p1@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH2D3C_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 10bp_to_uc004bsa.2, uc004bsb.2_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.85e-27 | 36 |
endothelial cell of vascular tree | 4.07e-24 | 24 |
meso-epithelial cell | 1.21e-18 | 45 |
blood vessel endothelial cell | 1.76e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.76e-18 | 18 |
lining cell | 2.22e-11 | 58 |
barrier cell | 2.22e-11 | 58 |
endothelial cell of artery | 6.93e-10 | 9 |
vein endothelial cell | 2.93e-07 | 6 |
lymphangioblast | 3.48e-07 | 6 |
endothelial cell of lymphatic vessel | 3.48e-07 | 6 |
vascular lymphangioblast | 3.48e-07 | 6 |
aortic endothelial cell | 3.69e-07 | 6 |