FFCP PHASE1:Hg19::chr9:130533615..130533631,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc004bsa.2,uc004bsb.2_5end | |||
|description=CAGE_peak_9_at_SH2D3C_5end | |||
|id=chr9:130533615..130533631,- | |||
|ontology_enrichment_celltype=CL:0000115!5.59e-08!35;CL:0000738!1.06e-07!140;CL:0002139!2.62e-07!24;CL:0002031!9.03e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.41e-20;6!CL:0000990;6.98e-17;8!CL:0000451;1.25e-13;10!CL:0000097;9.88e-12;5!CL:0002619;1.19e-11;3!CL:0000453;1.27e-10;5!CL:0000840;7.38e-09;5!CL:0000115;3.70e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.36e-19,6;CL:0000990,3.61e-17,8;CL:0000451,7.37e-14,10;CL:0000097,7.19e-12,5;CL:0002028,7.19e-12,5;CL:0002619,1.01e-11,3;CL:0000453,7.87e-11,5;CL:0000766,8.13e-11,72;CL:0000557,2.24e-10,67;CL:0000738,4.38e-10,136;CL:0000763,1.39e-09,108;CL:0000049,1.39e-09,108;CL:0000839,2.91e-09,66;CL:0000840,5.41e-09,5;CL:0001029,5.41e-09,5;CL:0000115,5.62e-09,36;CL:0002032,1.38e-07,161;CL:0000837,1.38e-07,161;CL:0002031,4.01e-07,120;CL:0000037,4.96e-07,168;CL:0002078,9.75e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-17!115;UBERON:0002193!3.64e-10!112;UBERON:0002390!2.11e-07!102;UBERON:0003061!2.11e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;6.17e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.50e-13,93;UBERON:0002193,7.63e-13,108;UBERON:0002390,9.82e-09,98;UBERON:0003061,9.82e-09,98;UBERON:0002371,1.07e-08,76;UBERON:0002465,7.87e-08,10;UBERON:0001474,8.73e-08,82;UBERON:0004765,9.10e-07,90 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.458480434487708,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0.434021741431704,4.25439401055856,2.91504299417082,6.18181362322048,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,1.14950487990897,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,1.83905144929746,0.32592226663359,0.473447805734733,1.94826728407911,3.67654507721073,0.294605907474837,1.10766947291811,0,2.68991771423918,4.03183977435623,1.47994114143309,2.48715016007264,2.02862160014537,0.14828656316206,0,0,1.35971211237079,0.766440987203842,0.68725489096526,0.506039384039006,0.637130828648193,0,0,0.150575119077773,0.639933055772092,2.49861453104692,0.947109008176067,1.64225599384209,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,1.62273696827342,2.43781632218974,1.19662164466979,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0.835979866147242,1.03366703667732,0.35576626268671,0.33472061276467,2.41697590265488,0.760272105718513,1.95249646038536,0.735326160691737,0,0.625098097988558,0.22452937262617,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0.132529768321485,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,2.95262181849859,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15493158208859,1.85194205030644,0.570762456703795,0,0,2.21595305478658,2.10603838625314,1.18904929830983,0,0.16798212819886,0,0,0,0,0.985326475791887,1.67292024625129,4.35389042635621,5.33243827642757,9.08945520669936,0,0,1.17217447210047,0,0,0.300343057843917,0,0.560655421726804,0,0.36669142910475,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0,2.99602809578873,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.587403472388222,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,0,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0.507447609232169,2.29391162142713,1.13929437434833,0.714695326373367,0.822724546172388,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0.5745161103971,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,1.17206543417515,0,1.22587722705226,0,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0.492339221844278,0,0,0,0,0.591860433821602,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0,0,0.278847488557207,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0.123563938946503,0.104421949505455,0.202203398942031,0,0,0,0,0,0,0,0,1.13735843331278,0,0,0.664653872707185,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0.343972064943233,0,0.146178634172371,0,0.581934098930517,0,0.225980740780532,0,0,0.253243183823515,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.788662062837943,0.837847203816763,0.458320848023367,0.717873024576814,0.199679000498991,0,1.11585728720936,0.671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.160753148465019,0,0,0,1.5476039091159,0.303747783290123,1.0063040627978,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,1.06787412567695,0.314408610199332,0,3.47316215268366,0.197611631897944,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.366078794705889,0.250381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,1.72724292407372,1.4720885483026,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.414943514785307,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.376051641746286,0,0,0,0,0.147856086217045,0.337687923091973,0,0.413373593002368,0.19024743058172,0,0,1.9848447135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| |||
|short_description=p9@SH2D3C | |||
}} |
Revision as of 03:24, 23 January 2014
Short description: | p9@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SH2D3C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc004bsa.2, uc004bsb.2_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.36e-19 | 6 |
conventional dendritic cell | 3.61e-17 | 8 |
dendritic cell | 7.37e-14 | 10 |
mast cell | 7.19e-12 | 5 |
basophil mast progenitor cell | 7.19e-12 | 5 |
adult endothelial progenitor cell | 1.01e-11 | 3 |
Langerhans cell | 7.87e-11 | 5 |
myeloid leukocyte | 8.13e-11 | 72 |
granulocyte monocyte progenitor cell | 2.24e-10 | 67 |
leukocyte | 4.38e-10 | 136 |
myeloid cell | 1.39e-09 | 108 |
common myeloid progenitor | 1.39e-09 | 108 |
myeloid lineage restricted progenitor cell | 2.91e-09 | 66 |
immature conventional dendritic cell | 5.41e-09 | 5 |
common dendritic progenitor | 5.41e-09 | 5 |
endothelial cell | 5.62e-09 | 36 |
hematopoietic oligopotent progenitor cell | 1.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 4.01e-07 | 120 |
hematopoietic stem cell | 4.96e-07 | 168 |
meso-epithelial cell | 9.75e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.50e-13 | 93 |
hemolymphoid system | 7.63e-13 | 108 |
hematopoietic system | 9.82e-09 | 98 |
blood island | 9.82e-09 | 98 |
bone marrow | 1.07e-08 | 76 |
lymphoid system | 7.87e-08 | 10 |
bone element | 8.73e-08 | 82 |
skeletal element | 9.10e-07 | 90 |