FFCP PHASE1:Mm9::chr3:75361432..75361443,+: Difference between revisions
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{{FFCP|EntrezGene=20713|HGNC=|MCL_coexpression_id=1|UniProt=O35684|association_with_transcript=-11bp_to_NM_009250,uc008pnd.2,uc008pne.2_5end|description=CAGE_peak_2_at_Serpini1_5end|id=chr3:75361432..75361443,+|ontology_enrichment_celltype=CL:0000540!2.41e-10!33;CL:0000047!2.41e-10!33;CL:0000031!2.41e-10!33;CL:0000404!2.41e-10!33;CL:0000117!3.96e-08!23;CL:0000337!3.96e-08!23;CL:0000393!1.49e-07!39;CL:0000211!1.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,8.73e-11,33;CL:0000047,8.73e-11,33;CL:0000031,8.73e-11,33;CL:0000404,8.73e-11,33;CL:0000393,2.30e-08,39;CL:0000211,2.30e-08,39;CL:0000117,2.41e-07,23;CL:0000337,2.41e-07,23;CL:0002319,3.80e-07,43;CL:0000221,7.03e-07,44;CL:0000133,7.03e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.76e-20!71;UBERON:0003075!9.76e-20!71;UBERON:0007284!9.76e-20!71;UBERON:0001017!4.26e-19!73;UBERON:0005743!4.26e-19!73;UBERON:0000073!4.88e-18!75;UBERON:0001016!4.88e-18!75;UBERON:0001049!3.95e-16!52;UBERON:0005068!3.95e-16!52;UBERON:0006241!3.95e-16!52;UBERON:0007135!3.95e-16!52;UBERON:0000033!4.41e-16!63;UBERON:0004121!1.07e-15!102;UBERON:0000924!1.07e-15!102;UBERON:0006601!1.07e-15!102;UBERON:0000955!1.63e-15!50;UBERON:0006238!1.63e-15!50;UBERON:0002616!7.87e-15!49;UBERON:0003056!4.11e-14!49;UBERON:0002020!7.37e-13!34;UBERON:0003080!3.69e-12!40;UBERON:0002780!1.59e-11!39;UBERON:0001890!1.59e-11!39;UBERON:0006240!1.59e-11!39;UBERON:0002791!1.45e-10!29;UBERON:0003528!1.45e-10!29;UBERON:0001893!1.45e-10!29;UBERON:0000153!1.01e-09!94;UBERON:0007811!1.09e-08!86;UBERON:0002021!7.50e-08!10;UBERON:0000411!7.50e-08!10;UBERON:0001950!7.50e-08!10;UBERON:0000956!3.36e-07!21;UBERON:0001869!3.36e-07!21;UBERON:0000203!3.36e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-32,73;UBERON:0001016,2.19e-31,75;UBERON:0000073,1.41e-28,54;UBERON:0001049,2.56e-26,52;UBERON:0005068,2.56e-26,52;UBERON:0006241,2.56e-26,52;UBERON:0007135,2.56e-26,52;UBERON:0002346,1.71e-25,64;UBERON:0003075,1.71e-25,64;UBERON:0007284,1.71e-25,64;UBERON:0004121,3.30e-23,95;UBERON:0000924,3.30e-23,95;UBERON:0006601,3.30e-23,95;UBERON:0000955,5.61e-23,47;UBERON:0006238,5.61e-23,47;UBERON:0002616,1.23e-21,46;UBERON:0010371,5.72e-21,73;UBERON:0002020,8.11e-20,34;UBERON:0003080,5.48e-18,40;UBERON:0002780,9.30e-17,39;UBERON:0001890,9.30e-17,39;UBERON:0006240,9.30e-17,39;UBERON:0003528,1.30e-16,29;UBERON:0002791,1.30e-16,29;UBERON:0001893,1.30e-16,29;UBERON:0002021,3.48e-15,10;UBERON:0000411,3.48e-15,10;UBERON:0001950,3.48e-15,10;UBERON:0003056,1.92e-14,49;UBERON:0010314,2.22e-14,92;UBERON:0002619,4.03e-13,17;UBERON:0000956,6.85e-12,21;UBERON:0001869,6.85e-12,21;UBERON:0000203,6.85e-12,21;UBERON:0003076,5.40e-09,12;UBERON:0003057,5.40e-09,12;UBERON:0002950,6.38e-07,4;UBERON:0001891,6.38e-07,4;UBERON:0009616,6.38e-07,4;UBERON:0010286,6.38e-07,4;UBERON:0000025,8.46e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0.342401459862411,0.0874204024189974,0,0,0,1.26184866143295,1.23402990245165,1.27316895539409,1.9559956734746,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,2.18117387875057,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.420649922702764,0.856952953211411,2.42955395046775,1.10241719293459,0.191690942036473,0,2.20231761998777,3.70293280447044,4.91540906419979,0.527545150920775,0.548925861614458,1.04182674111352,4.74611098302348,2.25105044012672,5.95913166329559,2.06240009831567,2.70506193518296,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,5.5628351432194,4.60782754989601,0.510914110417183,0.239630249011841,0,0,7.33974133083631,3.20250421973039,1.88481528169297,8.69121600961382,8.43861009190091,4.36354893575076,4.70499662896497,0.101839363850316,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,0.720248519221397,0.452114453507145,0.680364991513279,0.896796041993948,0.374806898238915,1.03481348295606,0.431135985865684,1.13463648100692,0.175951124163949,0.876782929710299,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,3.57492912559016,2.88132914661996,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.1939524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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20713 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35684 | |||
|association_with_transcript=-11bp_to_NM_009250,uc008pnd.2,uc008pne.2_5end | |||
|cluster_id=chr3:75361432..75361443,+ | |||
|description=CAGE_peak_2_at_Serpini1_5end | |||
|id=chr3:75361432..75361443,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.41e-10!33;CL:0000047!2.41e-10!33;CL:0000031!2.41e-10!33;CL:0000404!2.41e-10!33;CL:0000117!3.96e-08!23;CL:0000337!3.96e-08!23;CL:0000393!1.49e-07!39;CL:0000211!1.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.73e-11,33;CL:0000047,8.73e-11,33;CL:0000031,8.73e-11,33;CL:0000404,8.73e-11,33;CL:0000393,2.30e-08,39;CL:0000211,2.30e-08,39;CL:0000117,2.41e-07,23;CL:0000337,2.41e-07,23;CL:0002319,3.80e-07,43;CL:0000221,7.03e-07,44;CL:0000133,7.03e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.76e-20!71;UBERON:0003075!9.76e-20!71;UBERON:0007284!9.76e-20!71;UBERON:0001017!4.26e-19!73;UBERON:0005743!4.26e-19!73;UBERON:0000073!4.88e-18!75;UBERON:0001016!4.88e-18!75;UBERON:0001049!3.95e-16!52;UBERON:0005068!3.95e-16!52;UBERON:0006241!3.95e-16!52;UBERON:0007135!3.95e-16!52;UBERON:0000033!4.41e-16!63;UBERON:0004121!1.07e-15!102;UBERON:0000924!1.07e-15!102;UBERON:0006601!1.07e-15!102;UBERON:0000955!1.63e-15!50;UBERON:0006238!1.63e-15!50;UBERON:0002616!7.87e-15!49;UBERON:0003056!4.11e-14!49;UBERON:0002020!7.37e-13!34;UBERON:0003080!3.69e-12!40;UBERON:0002780!1.59e-11!39;UBERON:0001890!1.59e-11!39;UBERON:0006240!1.59e-11!39;UBERON:0002791!1.45e-10!29;UBERON:0003528!1.45e-10!29;UBERON:0001893!1.45e-10!29;UBERON:0000153!1.01e-09!94;UBERON:0007811!1.09e-08!86;UBERON:0002021!7.50e-08!10;UBERON:0000411!7.50e-08!10;UBERON:0001950!7.50e-08!10;UBERON:0000956!3.36e-07!21;UBERON:0001869!3.36e-07!21;UBERON:0000203!3.36e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-32,73;UBERON:0001016,2.19e-31,75;UBERON:0000073,1.41e-28,54;UBERON:0001049,2.56e-26,52;UBERON:0005068,2.56e-26,52;UBERON:0006241,2.56e-26,52;UBERON:0007135,2.56e-26,52;UBERON:0002346,1.71e-25,64;UBERON:0003075,1.71e-25,64;UBERON:0007284,1.71e-25,64;UBERON:0004121,3.30e-23,95;UBERON:0000924,3.30e-23,95;UBERON:0006601,3.30e-23,95;UBERON:0000955,5.61e-23,47;UBERON:0006238,5.61e-23,47;UBERON:0002616,1.23e-21,46;UBERON:0010371,5.72e-21,73;UBERON:0002020,8.11e-20,34;UBERON:0003080,5.48e-18,40;UBERON:0002780,9.30e-17,39;UBERON:0001890,9.30e-17,39;UBERON:0006240,9.30e-17,39;UBERON:0003528,1.30e-16,29;UBERON:0002791,1.30e-16,29;UBERON:0001893,1.30e-16,29;UBERON:0002021,3.48e-15,10;UBERON:0000411,3.48e-15,10;UBERON:0001950,3.48e-15,10;UBERON:0003056,1.92e-14,49;UBERON:0010314,2.22e-14,92;UBERON:0002619,4.03e-13,17;UBERON:0000956,6.85e-12,21;UBERON:0001869,6.85e-12,21;UBERON:0000203,6.85e-12,21;UBERON:0003076,5.40e-09,12;UBERON:0003057,5.40e-09,12;UBERON:0002950,6.38e-07,4;UBERON:0001891,6.38e-07,4;UBERON:0009616,6.38e-07,4;UBERON:0010286,6.38e-07,4;UBERON:0000025,8.46e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0.342401459862411,0.0874204024189974,0,0,0,1.26184866143295,1.23402990245165,1.27316895539409,1.9559956734746,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,2.18117387875057,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.420649922702764,0.856952953211411,2.42955395046775,1.10241719293459,0.191690942036473,0,2.20231761998777,3.70293280447044,4.91540906419979,0.527545150920775,0.548925861614458,1.04182674111352,4.74611098302348,2.25105044012672,5.95913166329559,2.06240009831567,2.70506193518296,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,5.5628351432194,4.60782754989601,0.510914110417183,0.239630249011841,0,0,7.33974133083631,3.20250421973039,1.88481528169297,8.69121600961382,8.43861009190091,4.36354893575076,4.70499662896497,0.101839363850316,0.124406970610093,0.252722758433675,0.631325567659422,0.390361328888111,0.459804208866946,0.720248519221397,0.452114453507145,0.680364991513279,0.896796041993948,0.374806898238915,1.03481348295606,0.431135985865684,1.13463648100692,0.175951124163949,0.876782929710299,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,3.57492912559016,2.88132914661996,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0,0,0,0.167506257441816,0,0,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,5.77982123956051,8.55645312123083,0,0.252470927204373,3.47059041357882,4.29482618726302,2.58508077279359,0.716906393857656,0,0.283076530788832,3.23848561339915,3.21481443702443,2.76701444562566,8.67567554338879,0.141940085208269,0.35613120733451,0.325773918707152,0,1.32745138339963,0.485561272309963,0.302323556964751,1.32023555829129,0.295301892880773,0.614870295887855,0.775284879504663,0,0.356497378384721,0.948110273807448,3.16255825724996,0,3.74483566329167,0.720244376125241,0.129358683782755,0,1.06404140185364,0.713475270408282,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,5.7481843623258,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.552799895217695,0,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,1.12738587736838,0.149516546043979,0.330916980914195,0.777804753376191,0.774958940866387,1.01373675294467,0.58678619322877,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,3.3885110557024,4.60325236507177,3.43737308063638,3.60891682921744,5.48066015816514,3.7769694869485,10.1253375034771,8.10578165803597,10.4222754066367,4.65984280576638,0,1.19707462020309,1.02440163452481,1.94485373654635,0.209613162627982,0.183843508450014,0.222246727801615,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.37456602987953,0.768301828858431,0.861532034334199,0.476293691283074,0.231768651889711,0.77163688185482,1.64834360321323,0.294397840268795,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,0.470546902076653,0.676916863133412,0.365855945745545,0.789209134313529,0.271608227691724,1.68342681497322,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Serpini1 | |||
}} |
Revision as of 00:15, 4 August 2015
Short description: | p2@Serpini1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Serpini1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -11bp_to_NM_009250, uc008pnd.2, uc008pne.2_5end |
EntrezGene: | 20713 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.73e-11 | 33 |
neuronal stem cell | 8.73e-11 | 33 |
neuroblast | 8.73e-11 | 33 |
electrically signaling cell | 8.73e-11 | 33 |
electrically responsive cell | 2.30e-08 | 39 |
electrically active cell | 2.30e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.41e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.41e-07 | 23 |
neural cell | 3.80e-07 | 43 |
ectodermal cell | 7.03e-07 | 44 |
neurectodermal cell | 7.03e-07 | 44 |