FFCP PHASE1:Mm9::chr8:87298020..87298041,-: Difference between revisions
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{{FFCP|EntrezGene=18032|HGNC=|MCL_coexpression_id=1345|UniProt=F6VBN9,Q3TYK3,E9PUH7,Q5CZY4|association_with_transcript=226bp_to_ENSMUST00000063596,ENSMUST00000109762,NM_001081981,uc009mnc.1,uc009mnd.1_5end|description=CAGE_peak_9_at_Nfix_5end|id=chr8:87298020..87298041,-|ontology_enrichment_celltype=CL:0000055!7.09e-16!50;CL:0002319!7.34e-16!43;CL:0000221!4.25e-15!44;CL:0000133!4.25e-15!44;CL:0000393!9.64e-13!39;CL:0000211!9.64e-13!39;CL:0000540!4.59e-12!33;CL:0000047!4.59e-12!33;CL:0000031!4.59e-12!33;CL:0000404!4.59e-12!33;CL:0000117!5.92e-12!23;CL:0000337!5.92e-12!23;CL:0002321!3.83e-07!70;CL:0000220!3.83e-07!70;CL:0002453!5.70e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,6.02e-19,43;CL:0000221,2.41e-18,44;CL:0000133,2.41e-18,44;CL:0000117,9.83e-16,23;CL:0000337,9.83e-16,23;CL:0000540,3.51e-12,33;CL:0000047,3.51e-12,33;CL:0000031,3.51e-12,33;CL:0000404,3.51e-12,33;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39;CL:0002453,1.35e-10,8;CL:0002321,1.51e-10,70;CL:0000333,3.54e-08,10;CL:0000095,3.54e-08,10;CL:0000243,3.54e-08,10;CL:0000123,3.54e-08,10;CL:0000125,3.54e-08,10;CL:0000030,3.54e-08,10;CL:0000339,3.54e-08,10;CL:0000128,1.11e-07,6;CL:0000126,1.11e-07,6;CL:0000127,1.11e-07,6;CL:0002609,1.92e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.80e-29!73;UBERON:0005743!4.80e-29!73;UBERON:0000073!2.03e-27!75;UBERON:0001016!2.03e-27!75;UBERON:0001049!2.47e-23!52;UBERON:0005068!2.47e-23!52;UBERON:0006241!2.47e-23!52;UBERON:0007135!2.47e-23!52;UBERON:0002020!4.26e-23!34;UBERON:0004121!6.46e-23!102;UBERON:0000924!6.46e-23!102;UBERON:0006601!6.46e-23!102;UBERON:0002346!1.61e-20!71;UBERON:0003075!1.61e-20!71;UBERON:0007284!1.61e-20!71;UBERON:0002791!7.84e-20!29;UBERON:0003528!7.84e-20!29;UBERON:0001893!7.84e-20!29;UBERON:0000955!9.01e-20!50;UBERON:0006238!9.01e-20!50;UBERON:0002616!1.89e-19!49;UBERON:0000033!7.54e-19!63;UBERON:0003056!3.76e-18!49;UBERON:0003080!1.90e-17!40;UBERON:0002780!3.52e-17!39;UBERON:0001890!3.52e-17!39;UBERON:0006240!3.52e-17!39;UBERON:0000956!5.56e-16!21;UBERON:0001869!5.56e-16!21;UBERON:0000203!5.56e-16!21;UBERON:0002619!5.16e-13!17;UBERON:0000153!1.40e-10!94;UBERON:0007811!2.04e-09!86;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.58e-40,34;UBERON:0001017,7.62e-34,73;UBERON:0003528,1.49e-33,29;UBERON:0002791,1.49e-33,29;UBERON:0001893,1.49e-33,29;UBERON:0001049,4.97e-33,52;UBERON:0005068,4.97e-33,52;UBERON:0006241,4.97e-33,52;UBERON:0007135,4.97e-33,52;UBERON:0001016,1.28e-32,75;UBERON:0000073,3.07e-31,54;UBERON:0000956,4.04e-29,21;UBERON:0001869,4.04e-29,21;UBERON:0000203,4.04e-29,21;UBERON:0002346,7.30e-28,64;UBERON:0003075,7.30e-28,64;UBERON:0007284,7.30e-28,64;UBERON:0002780,3.15e-27,39;UBERON:0001890,3.15e-27,39;UBERON:0006240,3.15e-27,39;UBERON:0003080,2.46e-26,40;UBERON:0002616,1.05e-25,46;UBERON:0004121,1.08e-25,95;UBERON:0000924,1.08e-25,95;UBERON:0006601,1.08e-25,95;UBERON:0000955,5.73e-25,47;UBERON:0006238,5.73e-25,47;UBERON:0010371,4.23e-23,73;UBERON:0002619,5.98e-23,17;UBERON:0003056,6.09e-23,49;UBERON:0010314,3.71e-17,92;UBERON:0002021,1.01e-15,10;UBERON:0000411,1.01e-15,10;UBERON:0001950,1.01e-15,10;UBERON:0000025,2.65e-10,114;UBERON:0004111,5.41e-09,122;UBERON:0001954,1.03e-08,7;UBERON:0003022,1.03e-08,7;UBERON:0002421,1.03e-08,7;UBERON:0000349,1.03e-08,7;UBERON:0002600,1.03e-08,7;UBERON:0002240,1.04e-08,6;UBERON:0005174,1.04e-08,6;UBERON:0001137,1.04e-08,6;UBERON:0001948,1.12e-07,5;UBERON:0002315,1.12e-07,5;UBERON:0003076,4.56e-07,12;UBERON:0003057,4.56e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.917733760808408,0.782391344348039,4.14247797122848,4.17403747195497,5.05517737593137,4.05960622713551,10.062679505548,0,0,0,0,0.573066879877513,1.03134418455488,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,2.39680088414724,4.99483796918021,9.33206510776299,14.0406175864958,10.7265730289205,1.42825492201902,1.76694832761291,1.95985278743926,0.958454710182364,1.83843757322004,0,1.0214987046815,0.768032666281217,1.45074916503213,1.73826522844578,2.08365348222704,0.279182999001381,1.68828783009504,1.68078072554491,1.76777151284201,1.99320353118744,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0.519572009205738,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0.884610551949874,0.161766849947409,0,0,0,1.75668478206928,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,1.7591609295801,1.39059456153821,2.30143911597297,2.0778804455956,0.324482526135515,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0.459804208866946,0.360124259610698,0,0.340182495756639,1.0249097622788,1.12442069471675,0.776110112217047,0,0.378212160335639,0.175951124163949,1.31517439456545,1.39023624612799,1.0447564995665,2.26360350048738,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,3.15434922846191,13.6863134464448,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,1.3114795630134,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,1.58115111178609,0.642642632843614,0,0.712262414669021,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0,0,0,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0.506868376472335,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,5.64751842617067,4.60325236507177,2.86447756719698,4.46818274093588,4.11049511862385,1.5107877947794,2.02506750069542,4.05289082901798,1.81256963593682,3.10656187051092,0,0.399024873401031,1.02440163452481,1.45864030240976,0.838452650511929,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,0.758091635291392,1.52087579934144,0.565879024158229,0.936415074698824,0.704276676453562,0.918967503289812,0.476293691283074,0.347652977834566,0.578727661391115,0.824171801606613,0.441596760403192,1.71434626192708,0.70990322463735,0.476872379894642,0.581385666529314,0.658765662907314,0.676916863133412,0.914639864363863,1.31534855718921,0.679020569229309,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,1.49886346762768,0.467863216890817,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p9@Nfix}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18032 | |||
|HGNC= | |||
|MCL_coexpression_id=1345 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6VBN9,uniprot:Q3TYK3,uniprot:E9PUH7,uniprot:Q5CZY4 | |||
|association_with_transcript=226bp_to_ENSMUST00000063596,ENSMUST00000109762,NM_001081981,uc009mnc.1,uc009mnd.1_5end | |||
|cluster_id=chr8:87298020..87298041,- | |||
|description=CAGE_peak_9_at_Nfix_5end | |||
|id=chr8:87298020..87298041,- | |||
|ontology_enrichment_celltype=CL:0000055!7.09e-16!50;CL:0002319!7.34e-16!43;CL:0000221!4.25e-15!44;CL:0000133!4.25e-15!44;CL:0000393!9.64e-13!39;CL:0000211!9.64e-13!39;CL:0000540!4.59e-12!33;CL:0000047!4.59e-12!33;CL:0000031!4.59e-12!33;CL:0000404!4.59e-12!33;CL:0000117!5.92e-12!23;CL:0000337!5.92e-12!23;CL:0002321!3.83e-07!70;CL:0000220!3.83e-07!70;CL:0002453!5.70e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.02e-19,43;CL:0000221,2.41e-18,44;CL:0000133,2.41e-18,44;CL:0000117,9.83e-16,23;CL:0000337,9.83e-16,23;CL:0000540,3.51e-12,33;CL:0000047,3.51e-12,33;CL:0000031,3.51e-12,33;CL:0000404,3.51e-12,33;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39;CL:0002453,1.35e-10,8;CL:0002321,1.51e-10,70;CL:0000333,3.54e-08,10;CL:0000095,3.54e-08,10;CL:0000243,3.54e-08,10;CL:0000123,3.54e-08,10;CL:0000125,3.54e-08,10;CL:0000030,3.54e-08,10;CL:0000339,3.54e-08,10;CL:0000128,1.11e-07,6;CL:0000126,1.11e-07,6;CL:0000127,1.11e-07,6;CL:0002609,1.92e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.80e-29!73;UBERON:0005743!4.80e-29!73;UBERON:0000073!2.03e-27!75;UBERON:0001016!2.03e-27!75;UBERON:0001049!2.47e-23!52;UBERON:0005068!2.47e-23!52;UBERON:0006241!2.47e-23!52;UBERON:0007135!2.47e-23!52;UBERON:0002020!4.26e-23!34;UBERON:0004121!6.46e-23!102;UBERON:0000924!6.46e-23!102;UBERON:0006601!6.46e-23!102;UBERON:0002346!1.61e-20!71;UBERON:0003075!1.61e-20!71;UBERON:0007284!1.61e-20!71;UBERON:0002791!7.84e-20!29;UBERON:0003528!7.84e-20!29;UBERON:0001893!7.84e-20!29;UBERON:0000955!9.01e-20!50;UBERON:0006238!9.01e-20!50;UBERON:0002616!1.89e-19!49;UBERON:0000033!7.54e-19!63;UBERON:0003056!3.76e-18!49;UBERON:0003080!1.90e-17!40;UBERON:0002780!3.52e-17!39;UBERON:0001890!3.52e-17!39;UBERON:0006240!3.52e-17!39;UBERON:0000956!5.56e-16!21;UBERON:0001869!5.56e-16!21;UBERON:0000203!5.56e-16!21;UBERON:0002619!5.16e-13!17;UBERON:0000153!1.40e-10!94;UBERON:0007811!2.04e-09!86;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.58e-40,34;UBERON:0001017,7.62e-34,73;UBERON:0003528,1.49e-33,29;UBERON:0002791,1.49e-33,29;UBERON:0001893,1.49e-33,29;UBERON:0001049,4.97e-33,52;UBERON:0005068,4.97e-33,52;UBERON:0006241,4.97e-33,52;UBERON:0007135,4.97e-33,52;UBERON:0001016,1.28e-32,75;UBERON:0000073,3.07e-31,54;UBERON:0000956,4.04e-29,21;UBERON:0001869,4.04e-29,21;UBERON:0000203,4.04e-29,21;UBERON:0002346,7.30e-28,64;UBERON:0003075,7.30e-28,64;UBERON:0007284,7.30e-28,64;UBERON:0002780,3.15e-27,39;UBERON:0001890,3.15e-27,39;UBERON:0006240,3.15e-27,39;UBERON:0003080,2.46e-26,40;UBERON:0002616,1.05e-25,46;UBERON:0004121,1.08e-25,95;UBERON:0000924,1.08e-25,95;UBERON:0006601,1.08e-25,95;UBERON:0000955,5.73e-25,47;UBERON:0006238,5.73e-25,47;UBERON:0010371,4.23e-23,73;UBERON:0002619,5.98e-23,17;UBERON:0003056,6.09e-23,49;UBERON:0010314,3.71e-17,92;UBERON:0002021,1.01e-15,10;UBERON:0000411,1.01e-15,10;UBERON:0001950,1.01e-15,10;UBERON:0000025,2.65e-10,114;UBERON:0004111,5.41e-09,122;UBERON:0001954,1.03e-08,7;UBERON:0003022,1.03e-08,7;UBERON:0002421,1.03e-08,7;UBERON:0000349,1.03e-08,7;UBERON:0002600,1.03e-08,7;UBERON:0002240,1.04e-08,6;UBERON:0005174,1.04e-08,6;UBERON:0001137,1.04e-08,6;UBERON:0001948,1.12e-07,5;UBERON:0002315,1.12e-07,5;UBERON:0003076,4.56e-07,12;UBERON:0003057,4.56e-07,12 | |||
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|short_description=p9@Nfix | |||
}} |
Revision as of 06:10, 4 August 2015
Short description: | p9@Nfix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nfix_5end |
Coexpression cluster: | MCL_coexpression_mm9:1345 |
Association with transcript: | 226bp_to_ENSMUST00000063596, ENSMUST00000109762, NM_001081981, uc009mnc.1, uc009mnd.1_5end |
EntrezGene: | 18032 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.02e-19 | 43 |
ectodermal cell | 2.41e-18 | 44 |
neurectodermal cell | 2.41e-18 | 44 |
CNS neuron (sensu Vertebrata) | 9.83e-16 | 23 |
neuroblast (sensu Vertebrata) | 9.83e-16 | 23 |
neuron | 3.51e-12 | 33 |
neuronal stem cell | 3.51e-12 | 33 |
neuroblast | 3.51e-12 | 33 |
electrically signaling cell | 3.51e-12 | 33 |
electrically responsive cell | 1.27e-10 | 39 |
electrically active cell | 1.27e-10 | 39 |
oligodendrocyte precursor cell | 1.35e-10 | 8 |
embryonic cell | 1.51e-10 | 70 |
migratory neural crest cell | 3.54e-08 | 10 |
neuron associated cell | 3.54e-08 | 10 |
glial cell (sensu Vertebrata) | 3.54e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.54e-08 | 10 |
glial cell | 3.54e-08 | 10 |
glioblast | 3.54e-08 | 10 |
glioblast (sensu Vertebrata) | 3.54e-08 | 10 |
oligodendrocyte | 1.11e-07 | 6 |
macroglial cell | 1.11e-07 | 6 |
astrocyte | 1.11e-07 | 6 |
neuron of cerebral cortex | 1.92e-07 | 6 |