FFCP PHASE1:Mm9::chr5:30062507..30062529,+: Difference between revisions
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{{FFCP|EntrezGene=23950|HGNC=|MCL_coexpression_id=1|UniProt=G3X8S5|association_with_transcript=-5bp_to_ENSMUST00000012734_5end|description=CAGE_peak_1_at_Dnajb6_5end|id=chr5:30062507..30062529,+|ontology_enrichment_celltype=CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23;CL:0000393!2.68e-11!39;CL:0000211!2.68e-11!39;CL:0000540!7.78e-11!33;CL:0000047!7.78e-11!33;CL:0000031!7.78e-11!33;CL:0000404!7.78e-11!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-13,23;CL:0000337,4.61e-13,23;CL:0000393,2.68e-11,39;CL:0000211,2.68e-11,39;CL:0000540,7.78e-11,33;CL:0000047,7.78e-11,33;CL:0000031,7.78e-11,33;CL:0000404,7.78e-11,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.21e-16!52;UBERON:0005068!6.21e-16!52;UBERON:0006241!6.21e-16!52;UBERON:0007135!6.21e-16!52;UBERON:0002020!7.27e-16!34;UBERON:0000073!1.03e-15!75;UBERON:0001016!1.03e-15!75;UBERON:0004121!2.75e-15!102;UBERON:0000924!2.75e-15!102;UBERON:0006601!2.75e-15!102;UBERON:0001017!3.97e-15!73;UBERON:0005743!3.97e-15!73;UBERON:0002346!5.85e-15!71;UBERON:0003075!5.85e-15!71;UBERON:0007284!5.85e-15!71;UBERON:0000955!1.99e-14!50;UBERON:0006238!1.99e-14!50;UBERON:0000033!2.17e-14!63;UBERON:0002616!5.04e-14!49;UBERON:0002791!1.04e-12!29;UBERON:0003528!1.04e-12!29;UBERON:0001893!1.04e-12!29;UBERON:0003080!1.30e-12!40;UBERON:0003056!3.29e-12!49;UBERON:0002780!3.32e-12!39;UBERON:0001890!3.32e-12!39;UBERON:0006240!3.32e-12!39;UBERON:0000025!1.53e-08!114;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0004111!3.34e-08!122;UBERON:0002021!2.17e-07!10;UBERON:0000411!2.17e-07!10;UBERON:0001950!2.17e-07!10;UBERON:0002619!8.53e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.45e-17,54;UBERON:0001049,6.21e-16,52;UBERON:0005068,6.21e-16,52;UBERON:0006241,6.21e-16,52;UBERON:0007135,6.21e-16,52;UBERON:0002020,7.27e-16,34;UBERON:0001016,1.03e-15,75;UBERON:0002346,1.66e-15,64;UBERON:0003075,1.66e-15,64;UBERON:0007284,1.66e-15,64;UBERON:0004121,1.94e-15,95;UBERON:0000924,1.94e-15,95;UBERON:0006601,1.94e-15,95;UBERON:0010371,2.05e-15,73;UBERON:0001017,3.97e-15,73;UBERON:0010314,1.16e-14,92;UBERON:0000955,6.77e-13,47;UBERON:0006238,6.77e-13,47;UBERON:0003528,1.04e-12,29;UBERON:0002791,1.04e-12,29;UBERON:0001893,1.04e-12,29;UBERON:0003080,1.30e-12,40;UBERON:0002616,1.68e-12,46;UBERON:0003056,3.29e-12,49;UBERON:0002780,3.32e-12,39;UBERON:0001890,3.32e-12,39;UBERON:0006240,3.32e-12,39;UBERON:0000025,1.53e-08,114;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0004111,3.34e-08,122;UBERON:0002021,2.17e-07,10;UBERON:0000411,2.17e-07,10;UBERON:0001950,2.17e-07,10;UBERON:0002619,8.53e-07,17|phase1_expression=29.7876855614917,15.0059425284925,11.8299802241279,8.77146212789807,8.5152274090879,13.4303417529512,8.87728034262997,13.0414556675992,4.78681655315667,3.7450324211519,8.38968044304974,10.9287857823611,9.75844160607873,10.7527094975367,13.9906099962578,19.0326751346436,26.5833513688696,14.1957974411207,16.5908464662944,12.3072999021429,30.1053247134787,9.92909512008853,15.6719873483361,11.6794468639187,10.0940083669555,11.4846392823004,14.6459078694085,13.7901588918969,8.7410772949932,13.8616571367962,12.4169085966971,5.08024538767705,3.69038872550742,0,21.086168241843,19.7819227976606,18.5794114198756,25.5304294749514,28.9094077473806,30.8879008944541,32.9409633297368,39.6166381275899,36.4132764773365,14.9817213390937,18.2478476195126,20.3736894899467,10.1710874765245,5.66865406589161,10.5449367712546,6.02732687130279,8.11921245427103,7.18762821824858,15.6037823633695,5.07753499407941,11.7632829699862,16.7218633423366,23.7822755149168,31.455997628924,44.1049884673923,37.0293685490423,27.8885817542719,10.8430250262122,15.1180115338894,14.3983954765024,6.92206453796882,8.5257613793532,11.085204089181,6.91592949578798,39.50574228953,25.2461104680262,28.3938697824366,42.5619966761667,43.5111025674679,33.6849697841124,27.6034956532521,21.1420320920305,24.2254938198655,46.7335657391787,51.3045821075853,39.3021137435978,36.3205945101566,45.8403766089949,44.3900968412196,48.3975844627245,48.1314480496952,51.8546310433655,50.9690617260788,44.7358669980721,26.5041676666144,20.1776065485117,18.2614627882057,19.7897491705719,25.8389106808945,21.5881276655127,13.6453047664011,17.9210754838934,12.7804422319894,9.88495870952735,16.8860902991865,14.4869225549239,37.1826628210436,25.6652954828636,38.2207859559969,7.11066703153331,22.7315593061775,18.7486300451573,23.25412447068,21.2382016277452,12.1700805314171,19.445920217492,16.1341353892506,9.74289530598852,13.6063143381075,17.7852715852095,19.7549027987984,24.1279855352977,23.7307169024999,17.6411215442292,0.884610551949874,22.3238252927425,15.9005893291483,15.5160081003271,11.1835056730873,28.6925181071316,36.0248335719143,7.40825460104915,30.3132264999978,19.196887391789,31.1322056329008,29.0593840445356,19.6725259212009,52.1465561268387,42.4131341269155,53.1888151247088,27.4280218818619,32.123770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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23950 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X8S5 | |||
|association_with_transcript=-5bp_to_ENSMUST00000012734_5end | |||
|cluster_id=chr5:30062507..30062529,+ | |||
|description=CAGE_peak_1_at_Dnajb6_5end | |||
|id=chr5:30062507..30062529,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23;CL:0000393!2.68e-11!39;CL:0000211!2.68e-11!39;CL:0000540!7.78e-11!33;CL:0000047!7.78e-11!33;CL:0000031!7.78e-11!33;CL:0000404!7.78e-11!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-13,23;CL:0000337,4.61e-13,23;CL:0000393,2.68e-11,39;CL:0000211,2.68e-11,39;CL:0000540,7.78e-11,33;CL:0000047,7.78e-11,33;CL:0000031,7.78e-11,33;CL:0000404,7.78e-11,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.21e-16!52;UBERON:0005068!6.21e-16!52;UBERON:0006241!6.21e-16!52;UBERON:0007135!6.21e-16!52;UBERON:0002020!7.27e-16!34;UBERON:0000073!1.03e-15!75;UBERON:0001016!1.03e-15!75;UBERON:0004121!2.75e-15!102;UBERON:0000924!2.75e-15!102;UBERON:0006601!2.75e-15!102;UBERON:0001017!3.97e-15!73;UBERON:0005743!3.97e-15!73;UBERON:0002346!5.85e-15!71;UBERON:0003075!5.85e-15!71;UBERON:0007284!5.85e-15!71;UBERON:0000955!1.99e-14!50;UBERON:0006238!1.99e-14!50;UBERON:0000033!2.17e-14!63;UBERON:0002616!5.04e-14!49;UBERON:0002791!1.04e-12!29;UBERON:0003528!1.04e-12!29;UBERON:0001893!1.04e-12!29;UBERON:0003080!1.30e-12!40;UBERON:0003056!3.29e-12!49;UBERON:0002780!3.32e-12!39;UBERON:0001890!3.32e-12!39;UBERON:0006240!3.32e-12!39;UBERON:0000025!1.53e-08!114;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0004111!3.34e-08!122;UBERON:0002021!2.17e-07!10;UBERON:0000411!2.17e-07!10;UBERON:0001950!2.17e-07!10;UBERON:0002619!8.53e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.45e-17,54;UBERON:0001049,6.21e-16,52;UBERON:0005068,6.21e-16,52;UBERON:0006241,6.21e-16,52;UBERON:0007135,6.21e-16,52;UBERON:0002020,7.27e-16,34;UBERON:0001016,1.03e-15,75;UBERON:0002346,1.66e-15,64;UBERON:0003075,1.66e-15,64;UBERON:0007284,1.66e-15,64;UBERON:0004121,1.94e-15,95;UBERON:0000924,1.94e-15,95;UBERON:0006601,1.94e-15,95;UBERON:0010371,2.05e-15,73;UBERON:0001017,3.97e-15,73;UBERON:0010314,1.16e-14,92;UBERON:0000955,6.77e-13,47;UBERON:0006238,6.77e-13,47;UBERON:0003528,1.04e-12,29;UBERON:0002791,1.04e-12,29;UBERON:0001893,1.04e-12,29;UBERON:0003080,1.30e-12,40;UBERON:0002616,1.68e-12,46;UBERON:0003056,3.29e-12,49;UBERON:0002780,3.32e-12,39;UBERON:0001890,3.32e-12,39;UBERON:0006240,3.32e-12,39;UBERON:0000025,1.53e-08,114;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0004111,3.34e-08,122;UBERON:0002021,2.17e-07,10;UBERON:0000411,2.17e-07,10;UBERON:0001950,2.17e-07,10;UBERON:0002619,8.53e-07,17 | |||
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| |||
|short_description=p1@Dnajb6 | |||
}} |
Revision as of 06:15, 4 August 2015
Short description: | p1@Dnajb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -5bp_to_ENSMUST00000012734_5end |
EntrezGene: | 23950 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.61e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-13 | 23 |
electrically responsive cell | 2.68e-11 | 39 |
electrically active cell | 2.68e-11 | 39 |
neuron | 7.78e-11 | 33 |
neuronal stem cell | 7.78e-11 | 33 |
neuroblast | 7.78e-11 | 33 |
electrically signaling cell | 7.78e-11 | 33 |