FFCP PHASE1:Mm9::chr7:134165127..134165149,-: Difference between revisions
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{{FFCP|EntrezGene=69017|HGNC=|MCL_coexpression_id=537|UniProt=E9PUL5|association_with_transcript=-402bp_to_ENSMUST00000159916,NM_001102563,uc009jty.1_5end|description=CAGE_peak_8_at_Prrt2_5end|id=chr7:134165127..134165149,-|ontology_enrichment_celltype=CL:0000117!3.69e-11!23;CL:0000337!3.69e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-10,23;CL:0000337,2.23e-10,23;CL:0002612,1.06e-09,3;CL:0002610,3.07e-08,3;CL:0002611,3.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.07e-23!52;UBERON:0005068!3.07e-23!52;UBERON:0006241!3.07e-23!52;UBERON:0007135!3.07e-23!52;UBERON:0000955!7.17e-21!50;UBERON:0006238!7.17e-21!50;UBERON:0001017!1.53e-20!73;UBERON:0005743!1.53e-20!73;UBERON:0002020!1.94e-20!34;UBERON:0002616!3.88e-20!49;UBERON:0000073!1.63e-19!75;UBERON:0001016!1.63e-19!75;UBERON:0002346!3.83e-18!71;UBERON:0003075!3.83e-18!71;UBERON:0007284!3.83e-18!71;UBERON:0000033!4.03e-18!63;UBERON:0002791!1.45e-15!29;UBERON:0003528!1.45e-15!29;UBERON:0001893!1.45e-15!29;UBERON:0003080!1.34e-14!40;UBERON:0002780!7.63e-14!39;UBERON:0001890!7.63e-14!39;UBERON:0006240!7.63e-14!39;UBERON:0004121!7.79e-14!102;UBERON:0000924!7.79e-14!102;UBERON:0006601!7.79e-14!102;UBERON:0003056!2.97e-13!49;UBERON:0002021!3.66e-11!10;UBERON:0000411!3.66e-11!10;UBERON:0001950!3.66e-11!10;UBERON:0007811!4.59e-11!86;UBERON:0000956!5.24e-11!21;UBERON:0001869!5.24e-11!21;UBERON:0000203!5.24e-11!21;UBERON:0000153!1.02e-10!94;UBERON:0003076!8.02e-10!12;UBERON:0003057!8.02e-10!12;UBERON:0002619!5.40e-09!17;UBERON:0002240!3.49e-07!6;UBERON:0005174!3.49e-07!6;UBERON:0001137!3.49e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.63e-45,54;UBERON:0001049,2.27e-38,52;UBERON:0005068,2.27e-38,52;UBERON:0006241,2.27e-38,52;UBERON:0007135,2.27e-38,52;UBERON:0002020,1.46e-37,34;UBERON:0001017,3.17e-32,73;UBERON:0001016,3.23e-31,75;UBERON:0002346,3.71e-30,64;UBERON:0003075,3.71e-30,64;UBERON:0007284,3.71e-30,64;UBERON:0002021,2.05e-28,10;UBERON:0000411,2.05e-28,10;UBERON:0001950,2.05e-28,10;UBERON:0002616,5.02e-28,46;UBERON:0000955,2.51e-27,47;UBERON:0006238,2.51e-27,47;UBERON:0010371,9.19e-26,73;UBERON:0003528,1.88e-25,29;UBERON:0002791,1.88e-25,29;UBERON:0001893,1.88e-25,29;UBERON:0003080,1.33e-24,40;UBERON:0004121,1.86e-23,95;UBERON:0000924,1.86e-23,95;UBERON:0006601,1.86e-23,95;UBERON:0002619,7.57e-23,17;UBERON:0002780,8.62e-23,39;UBERON:0001890,8.62e-23,39;UBERON:0006240,8.62e-23,39;UBERON:0000956,2.44e-21,21;UBERON:0001869,2.44e-21,21;UBERON:0000203,2.44e-21,21;UBERON:0010314,2.67e-19,92;UBERON:0003056,2.79e-19,49;UBERON:0001948,2.69e-15,5;UBERON:0002315,2.69e-15,5;UBERON:0000025,1.71e-14,114;UBERON:0003076,2.79e-14,12;UBERON:0003057,2.79e-14,12;UBERON:0004111,3.57e-13,122;UBERON:0002240,1.09e-12,6;UBERON:0005174,1.09e-12,6;UBERON:0001137,1.09e-12,6;UBERON:0002257,1.06e-09,3;UBERON:0011216,1.71e-08,194;UBERON:0004684,3.07e-08,3;UBERON:0002275,3.07e-08,3;UBERON:0000483,1.58e-07,174;UBERON:0000119,2.24e-07,176;UBERON:0002256,3.15e-07,2|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.630974884054146,5.71301968807607,3.53389665522582,0.244981598429908,0,0,1.10115880999389,1.40456071893706,1.22885226604995,1.31886287730194,0.548925861614458,0,0.837548997004143,0.56276261003168,1.06958773443767,6.18720029494702,3.98640706237488,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0.127070227073065,1.3481157546434,2.74500361691176,3.01570445070875,3.30266208365325,4.09144731728529,1.45451631191692,2.27137768294861,0.305518091550949,0.124406970610093,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,2.73376933133365,1.85228302282712,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0.234714477291508,0,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,8.74617949363636,8.59343270159095,5.32744865265431,2.74033007908257,2.2661816921691,1.35004500046361,3.15224842256954,3.17199686288943,3.10656187051092,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.377252682772152,0.187283014939765,0.448176066834085,0.0574354689556133,0,0.231768651889711,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0,0.145346416632329,0.282328141245992,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.929621047115796,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,0,0,0.231867835620421|short_description=p8@Prrt2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69017 | |||
|HGNC= | |||
|MCL_coexpression_id=537 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PUL5 | |||
|association_with_transcript=-402bp_to_ENSMUST00000159916,NM_001102563,uc009jty.1_5end | |||
|cluster_id=chr7:134165127..134165149,- | |||
|description=CAGE_peak_8_at_Prrt2_5end | |||
|id=chr7:134165127..134165149,- | |||
|ontology_enrichment_celltype=CL:0000117!3.69e-11!23;CL:0000337!3.69e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-10,23;CL:0000337,2.23e-10,23;CL:0002612,1.06e-09,3;CL:0002610,3.07e-08,3;CL:0002611,3.15e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.07e-23!52;UBERON:0005068!3.07e-23!52;UBERON:0006241!3.07e-23!52;UBERON:0007135!3.07e-23!52;UBERON:0000955!7.17e-21!50;UBERON:0006238!7.17e-21!50;UBERON:0001017!1.53e-20!73;UBERON:0005743!1.53e-20!73;UBERON:0002020!1.94e-20!34;UBERON:0002616!3.88e-20!49;UBERON:0000073!1.63e-19!75;UBERON:0001016!1.63e-19!75;UBERON:0002346!3.83e-18!71;UBERON:0003075!3.83e-18!71;UBERON:0007284!3.83e-18!71;UBERON:0000033!4.03e-18!63;UBERON:0002791!1.45e-15!29;UBERON:0003528!1.45e-15!29;UBERON:0001893!1.45e-15!29;UBERON:0003080!1.34e-14!40;UBERON:0002780!7.63e-14!39;UBERON:0001890!7.63e-14!39;UBERON:0006240!7.63e-14!39;UBERON:0004121!7.79e-14!102;UBERON:0000924!7.79e-14!102;UBERON:0006601!7.79e-14!102;UBERON:0003056!2.97e-13!49;UBERON:0002021!3.66e-11!10;UBERON:0000411!3.66e-11!10;UBERON:0001950!3.66e-11!10;UBERON:0007811!4.59e-11!86;UBERON:0000956!5.24e-11!21;UBERON:0001869!5.24e-11!21;UBERON:0000203!5.24e-11!21;UBERON:0000153!1.02e-10!94;UBERON:0003076!8.02e-10!12;UBERON:0003057!8.02e-10!12;UBERON:0002619!5.40e-09!17;UBERON:0002240!3.49e-07!6;UBERON:0005174!3.49e-07!6;UBERON:0001137!3.49e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.63e-45,54;UBERON:0001049,2.27e-38,52;UBERON:0005068,2.27e-38,52;UBERON:0006241,2.27e-38,52;UBERON:0007135,2.27e-38,52;UBERON:0002020,1.46e-37,34;UBERON:0001017,3.17e-32,73;UBERON:0001016,3.23e-31,75;UBERON:0002346,3.71e-30,64;UBERON:0003075,3.71e-30,64;UBERON:0007284,3.71e-30,64;UBERON:0002021,2.05e-28,10;UBERON:0000411,2.05e-28,10;UBERON:0001950,2.05e-28,10;UBERON:0002616,5.02e-28,46;UBERON:0000955,2.51e-27,47;UBERON:0006238,2.51e-27,47;UBERON:0010371,9.19e-26,73;UBERON:0003528,1.88e-25,29;UBERON:0002791,1.88e-25,29;UBERON:0001893,1.88e-25,29;UBERON:0003080,1.33e-24,40;UBERON:0004121,1.86e-23,95;UBERON:0000924,1.86e-23,95;UBERON:0006601,1.86e-23,95;UBERON:0002619,7.57e-23,17;UBERON:0002780,8.62e-23,39;UBERON:0001890,8.62e-23,39;UBERON:0006240,8.62e-23,39;UBERON:0000956,2.44e-21,21;UBERON:0001869,2.44e-21,21;UBERON:0000203,2.44e-21,21;UBERON:0010314,2.67e-19,92;UBERON:0003056,2.79e-19,49;UBERON:0001948,2.69e-15,5;UBERON:0002315,2.69e-15,5;UBERON:0000025,1.71e-14,114;UBERON:0003076,2.79e-14,12;UBERON:0003057,2.79e-14,12;UBERON:0004111,3.57e-13,122;UBERON:0002240,1.09e-12,6;UBERON:0005174,1.09e-12,6;UBERON:0001137,1.09e-12,6;UBERON:0002257,1.06e-09,3;UBERON:0011216,1.71e-08,194;UBERON:0004684,3.07e-08,3;UBERON:0002275,3.07e-08,3;UBERON:0000483,1.58e-07,174;UBERON:0000119,2.24e-07,176;UBERON:0002256,3.15e-07,2 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.630974884054146,5.71301968807607,3.53389665522582,0.244981598429908,0,0,1.10115880999389,1.40456071893706,1.22885226604995,1.31886287730194,0.548925861614458,0,0.837548997004143,0.56276261003168,1.06958773443767,6.18720029494702,3.98640706237488,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0.127070227073065,1.3481157546434,2.74500361691176,3.01570445070875,3.30266208365325,4.09144731728529,1.45451631191692,2.27137768294861,0.305518091550949,0.124406970610093,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,2.73376933133365,1.85228302282712,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0.234714477291508,0,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,8.74617949363636,8.59343270159095,5.32744865265431,2.74033007908257,2.2661816921691,1.35004500046361,3.15224842256954,3.17199686288943,3.10656187051092,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.377252682772152,0.187283014939765,0.448176066834085,0.0574354689556133,0,0.231768651889711,0,0,0.588795680537589,0.342869252385415,0.354951612318675,0,0.145346416632329,0.282328141245992,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.929621047115796,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p8@Prrt2 | |||
}} |
Revision as of 06:34, 4 August 2015
Short description: | p8@Prrt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Prrt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:537 |
Association with transcript: | -402bp_to_ENSMUST00000159916, NM_001102563, uc009jty.1_5end |
EntrezGene: | 69017 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.23e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.23e-10 | 23 |
neuron of the ventral spinal cord | 1.06e-09 | 3 |
raphe nuclei neuron | 3.07e-08 | 3 |
neuron of the dorsal spinal cord | 3.15e-07 | 2 |