FFCP PHASE1:Mm9::chr14:45608251..45608286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19217|HGNC=|MCL_coexpression_id=920|UniProt=Q62053|association_with_transcript=381bp_to_ENSMUST00000046891_5end|description=CAGE_peak_1_at_Ptger2_5end|id=chr14:45608251..45608286,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002320,1.79e-09,46;CL:0000134,1.79e-09,46;CL:0000624,4.45e-09,8;CL:0000988,6.93e-09,32;CL:0002032,6.93e-09,32;CL:0000037,6.93e-09,32;CL:0000837,6.93e-09,32;CL:0000791,5.66e-08,9;CL:0000789,5.66e-08,9;CL:0002420,5.66e-08,9;CL:0002419,5.66e-08,9;CL:0000790,5.66e-08,9;CL:0000219,1.90e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3|ontology_enrichment_uberon=UBERON:0005153!1.30e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.28e-14,17;UBERON:0002048,4.58e-12,14;UBERON:0000117,4.58e-12,14;UBERON:0000171,4.58e-12,14;UBERON:0000170,4.58e-12,14;UBERON:0005597,4.58e-12,14;UBERON:0000118,4.58e-12,14;UBERON:0005157,8.54e-12,20;UBERON:0005178,1.44e-09,17;UBERON:0005181,1.44e-09,17;UBERON:0002224,1.44e-09,17;UBERON:0000915,1.44e-09,17;UBERON:0008947,1.44e-09,17;UBERON:0003258,1.44e-09,17;UBERON:0002384,1.79e-09,46|phase1_expression=0,0,0,0.30246421130683,0,0,0,7.48915275961142,3.23814060948833,2.10658073689794,14.0398733944914,4.78632953972018,0.684802919724823,0.611942816932982,0,0.607425802169478,0,0.157731082679119,0.411343300817216,0.42438965179803,0.510259740906419,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,12.9744805528441,6.2506827561904,6.80580867165938,21.1763335691165,9.56263678941824,8.73918635456076,0,0,0,0,0,0,0.194429899074283,0,0,0,2.90144856804538,0,0,0.573066879877513,0,0,0,0,0,0,1.3498495759221,4.94433181283487,1.4209602298922,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0.075726193333184,0,0,3.44169550792555,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.445326417194474,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0,0.247194967734374,0.722996784599558,1.76922110389975,0.647067399789637,0,0,0,0,0,0.510914110417183,2.27648736561249,1.19980546198682,2.41433431438823,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0.870848794270651,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,2.80885274925294,1.02939162845886,1.42081749697796,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0,0,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0.387904974335251,0.140271639780637,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.964708639009667,1.2731292589071,1.15078454980324,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.358794827043824,0,2.95605104266567,0,0.488894929326078,0.169745085775188,0.469380496577004,1.00503754465089,3.09456733151818,2.34160377429359,4.88668946729192,5.3151525515706,2.07291199254733,2.29408640602033,2.59027472798843,2.74833211304872,3.01582567878545,3.80733978673097,6.39293554924747,3.58717770196152,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,3.12268187458191,0.35613120733451,0.651547837414304,0.989820737835213,0,0,0,0,0.590603785761546,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.164549020602121,1.522324745573,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.0603129249281559,0,0,0.582961673259701,0,1.19609616558497,0.412773735926445,0.740778109478847,0.188368457004691,0.546776910884101,0.228778173206523,3.90950388985867,2.09927178485487,4.97519905695926,0,0.158167996790568,0,0.216010681643603,0.627264888043406,0.436725127492355,0.809186078308924,0.909188012978695,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.584384510907845,0.226730383615211,0,0,0,0.965947970160952,2.25218970541418,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0,0,0.256100609619477,0.229741875822453,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.591026894253381,0,0.77468420592983,0.192906610981141,0,0.935726433781634,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421|short_description=p1@Ptger2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19217 | |||
|HGNC= | |||
|MCL_coexpression_id=920 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62053 | |||
|association_with_transcript=381bp_to_ENSMUST00000046891_5end | |||
|cluster_id=chr14:45608251..45608286,+ | |||
|description=CAGE_peak_1_at_Ptger2_5end | |||
|id=chr14:45608251..45608286,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.79e-09,46;CL:0000134,1.79e-09,46;CL:0000624,4.45e-09,8;CL:0000988,6.93e-09,32;CL:0002032,6.93e-09,32;CL:0000037,6.93e-09,32;CL:0000837,6.93e-09,32;CL:0000791,5.66e-08,9;CL:0000789,5.66e-08,9;CL:0002420,5.66e-08,9;CL:0002419,5.66e-08,9;CL:0000790,5.66e-08,9;CL:0000219,1.90e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005153!1.30e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.28e-14,17;UBERON:0002048,4.58e-12,14;UBERON:0000117,4.58e-12,14;UBERON:0000171,4.58e-12,14;UBERON:0000170,4.58e-12,14;UBERON:0005597,4.58e-12,14;UBERON:0000118,4.58e-12,14;UBERON:0005157,8.54e-12,20;UBERON:0005178,1.44e-09,17;UBERON:0005181,1.44e-09,17;UBERON:0002224,1.44e-09,17;UBERON:0000915,1.44e-09,17;UBERON:0008947,1.44e-09,17;UBERON:0003258,1.44e-09,17;UBERON:0002384,1.79e-09,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,7.48915275961142,3.23814060948833,2.10658073689794,14.0398733944914,4.78632953972018,0.684802919724823,0.611942816932982,0,0.607425802169478,0,0.157731082679119,0.411343300817216,0.42438965179803,0.510259740906419,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,12.9744805528441,6.2506827561904,6.80580867165938,21.1763335691165,9.56263678941824,8.73918635456076,0,0,0,0,0,0,0.194429899074283,0,0,0,2.90144856804538,0,0,0.573066879877513,0,0,0,0,0,0,1.3498495759221,4.94433181283487,1.4209602298922,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0.075726193333184,0,0,3.44169550792555,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.776813650941515,0.445326417194474,0,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0,0.247194967734374,0.722996784599558,1.76922110389975,0.647067399789637,0,0,0,0,0,0.510914110417183,2.27648736561249,1.19980546198682,2.41433431438823,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0.870848794270651,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,2.80885274925294,1.02939162845886,1.42081749697796,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0,0,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0.387904974335251,0.140271639780637,0.379419222745544,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.964708639009667,1.2731292589071,1.15078454980324,0.810676133875177,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.358794827043824,0,2.95605104266567,0,0.488894929326078,0.169745085775188,0.469380496577004,1.00503754465089,3.09456733151818,2.34160377429359,4.88668946729192,5.3151525515706,2.07291199254733,2.29408640602033,2.59027472798843,2.74833211304872,3.01582567878545,3.80733978673097,6.39293554924747,3.58717770196152,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,3.12268187458191,0.35613120733451,0.651547837414304,0.989820737835213,0,0,0,0,0.590603785761546,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.164549020602121,1.522324745573,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.0603129249281559,0,0,0.582961673259701,0,1.19609616558497,0.412773735926445,0.740778109478847,0.188368457004691,0.546776910884101,0.228778173206523,3.90950388985867,2.09927178485487,4.97519905695926,0,0.158167996790568,0,0.216010681643603,0.627264888043406,0.436725127492355,0.809186078308924,0.909188012978695,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.584384510907845,0.226730383615211,0,0,0,0.965947970160952,2.25218970541418,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0,0,0.256100609619477,0.229741875822453,0,0,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.591026894253381,0,0.77468420592983,0.192906610981141,0,0.935726433781634,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Ptger2 | |||
}} |
Revision as of 07:57, 4 August 2015
Short description: | p1@Ptger2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptger2_5end |
Coexpression cluster: | MCL_coexpression_mm9:920 |
Association with transcript: | 381bp_to_ENSMUST00000046891_5end |
EntrezGene: | 19217 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.79e-09 | 46 |
mesenchymal cell | 1.79e-09 | 46 |
CD4-positive, alpha-beta T cell | 4.45e-09 | 8 |
hematopoietic cell | 6.93e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.93e-09 | 32 |
hematopoietic stem cell | 6.93e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.93e-09 | 32 |
mature alpha-beta T cell | 5.66e-08 | 9 |
alpha-beta T cell | 5.66e-08 | 9 |
immature T cell | 5.66e-08 | 9 |
mature T cell | 5.66e-08 | 9 |
immature alpha-beta T cell | 5.66e-08 | 9 |
motile cell | 1.90e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 2.28e-14 | 17 |
lung | 4.58e-12 | 14 |
respiratory tube | 4.58e-12 | 14 |
respiration organ | 4.58e-12 | 14 |
pair of lungs | 4.58e-12 | 14 |
lung primordium | 4.58e-12 | 14 |
lung bud | 4.58e-12 | 14 |
epithelial fold | 8.54e-12 | 20 |
thoracic cavity element | 1.44e-09 | 17 |
thoracic segment organ | 1.44e-09 | 17 |
thoracic cavity | 1.44e-09 | 17 |
thoracic segment of trunk | 1.44e-09 | 17 |
respiratory primordium | 1.44e-09 | 17 |
endoderm of foregut | 1.44e-09 | 17 |
connective tissue | 1.79e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.31e-07 | 3 |
muscle cancer | 1.31e-07 | 3 |