FFCP PHASE1:Mm9::chr10:34004711..34004717,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:34004711..34004717,+|id=chr10:34004711..34004717,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000838,8.80e-17,12;CL:0000624,1.39e-16,8;CL:0000542,1.68e-15,13;CL:0000051,1.68e-15,13;CL:0000791,8.80e-15,9;CL:0000789,8.80e-15,9;CL:0002420,8.80e-15,9;CL:0002419,8.80e-15,9;CL:0000790,8.80e-15,9;CL:0000084,3.71e-12,11;CL:0000827,3.71e-12,11;CL:0000738,7.10e-12,17;CL:0002087,7.10e-12,17;CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0000213,3.65e-09,1;CL:0002078,3.65e-09,1;CL:0000115,3.65e-09,1;CL:0002262,3.65e-09,1;CL:1000398,3.65e-09,1;CL:0000945,6.33e-09,1;CL:0000236,6.33e-09,1;CL:0000826,6.33e-09,1;CL:0002031,4.39e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.97e-11,3;DOID:4045,1.97e-11,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.65e-09,1;UBERON:0001281,3.65e-09,1;UBERON:0000353,3.65e-09,1;UBERON:0003497,3.65e-09,1;UBERON:0003909,3.65e-09,1;UBERON:0003928,3.65e-09,1;UBERON:0003835,3.65e-09,1;UBERON:0003513,3.65e-09,1;UBERON:0001280,3.65e-09,1;UBERON:0004647,3.65e-09,1;UBERON:0002294,3.65e-09,1;UBERON:0001173,3.65e-09,1;UBERON:0004912,3.65e-09,1;UBERON:0005171,3.65e-09,1;UBERON:0001044,5.27e-09,1;UBERON:0001736,5.27e-09,1;UBERON:0003293,5.27e-09,1;UBERON:0003294,5.27e-09,1;UBERON:0001829,5.27e-09,1;UBERON:0010047,5.27e-09,1;UBERON:0000167,5.27e-09,1;UBERON:0006298,5.27e-09,1|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,1.67860320474049,0,0,0,0.0797721589953364,1.88320802924326,1.92324885321794,0,0.404950534779652,0.699561878128147,0.630924330716475,0.548457734422955,0,0.255129870453209,0.297872853602656,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,0,1.57057123192139,4.1176204162171,2.73218193983378,0,0.251793635951155,0.608261587317087,0.183546752161682,0,0,0,0,0,0,1.00669563634642,2.17608642603403,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,1.44932244350839,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0.251308704225729,0,0.511430914660661,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0,0.393528463494808,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0,0.565815239267694,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0.42366414172764,0.220528398054962,0,0,0,0.119372344003136,0,0,0.370850604021019,0.170870880797853,0,0.185194527369712,0.376736914009382,0,0.228778173206523,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.100966449948148,0,0.302478555410522,0.292373642219257,0.0962118416403295,0.584384510907845,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p@chr10:34004711..34004717,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:34004711..34004717,+ | |||
|description=CAGE_peak_at_chr10:34004711..34004717,+ | |||
|id=chr10:34004711..34004717,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.80e-17,12;CL:0000624,1.39e-16,8;CL:0000542,1.68e-15,13;CL:0000051,1.68e-15,13;CL:0000791,8.80e-15,9;CL:0000789,8.80e-15,9;CL:0002420,8.80e-15,9;CL:0002419,8.80e-15,9;CL:0000790,8.80e-15,9;CL:0000084,3.71e-12,11;CL:0000827,3.71e-12,11;CL:0000738,7.10e-12,17;CL:0002087,7.10e-12,17;CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0000213,3.65e-09,1;CL:0002078,3.65e-09,1;CL:0000115,3.65e-09,1;CL:0002262,3.65e-09,1;CL:1000398,3.65e-09,1;CL:0000945,6.33e-09,1;CL:0000236,6.33e-09,1;CL:0000826,6.33e-09,1;CL:0002031,4.39e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.97e-11,3;DOID:4045,1.97e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.65e-09,1;UBERON:0001281,3.65e-09,1;UBERON:0000353,3.65e-09,1;UBERON:0003497,3.65e-09,1;UBERON:0003909,3.65e-09,1;UBERON:0003928,3.65e-09,1;UBERON:0003835,3.65e-09,1;UBERON:0003513,3.65e-09,1;UBERON:0001280,3.65e-09,1;UBERON:0004647,3.65e-09,1;UBERON:0002294,3.65e-09,1;UBERON:0001173,3.65e-09,1;UBERON:0004912,3.65e-09,1;UBERON:0005171,3.65e-09,1;UBERON:0001044,5.27e-09,1;UBERON:0001736,5.27e-09,1;UBERON:0003293,5.27e-09,1;UBERON:0003294,5.27e-09,1;UBERON:0001829,5.27e-09,1;UBERON:0010047,5.27e-09,1;UBERON:0000167,5.27e-09,1;UBERON:0006298,5.27e-09,1 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,1.67860320474049,0,0,0,0.0797721589953364,1.88320802924326,1.92324885321794,0,0.404950534779652,0.699561878128147,0.630924330716475,0.548457734422955,0,0.255129870453209,0.297872853602656,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,0,1.57057123192139,4.1176204162171,2.73218193983378,0,0.251793635951155,0.608261587317087,0.183546752161682,0,0,0,0,0,0,1.00669563634642,2.17608642603403,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.151143120213571,1.44932244350839,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0.251308704225729,0,0.511430914660661,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0,0.393528463494808,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0,0.565815239267694,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0.42366414172764,0.220528398054962,0,0,0,0.119372344003136,0,0,0.370850604021019,0.170870880797853,0,0.185194527369712,0.376736914009382,0,0.228778173206523,0.169978429993855,0.279902904647316,0.552799895217695,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,1.24267862617385,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.100966449948148,0,0.302478555410522,0.292373642219257,0.0962118416403295,0.584384510907845,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:34004711..34004717,+ | |||
}} |
Latest revision as of 08:05, 4 August 2015
Short description: | p@chr10:34004711..34004717, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:34004711..34004717, + |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.80e-17 | 12 |
CD4-positive, alpha-beta T cell | 1.39e-16 | 8 |
lymphocyte | 1.68e-15 | 13 |
common lymphoid progenitor | 1.68e-15 | 13 |
mature alpha-beta T cell | 8.80e-15 | 9 |
alpha-beta T cell | 8.80e-15 | 9 |
immature T cell | 8.80e-15 | 9 |
mature T cell | 8.80e-15 | 9 |
immature alpha-beta T cell | 8.80e-15 | 9 |
T cell | 3.71e-12 | 11 |
pro-T cell | 3.71e-12 | 11 |
leukocyte | 7.10e-12 | 17 |
nongranular leukocyte | 7.10e-12 | 17 |
regulatory T cell | 2.52e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.52e-09 | 1 |
lining cell | 3.65e-09 | 1 |
meso-epithelial cell | 3.65e-09 | 1 |
endothelial cell | 3.65e-09 | 1 |
endothelial cell of sinusoid | 3.65e-09 | 1 |
endothelial cell of hepatic sinusoid | 3.65e-09 | 1 |
lymphocyte of B lineage | 6.33e-09 | 1 |
B cell | 6.33e-09 | 1 |
pro-B cell | 6.33e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 4.39e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.65e-09 | 1 |
hepatic sinusoid | 3.65e-09 | 1 |
parenchyma | 3.65e-09 | 1 |
abdomen blood vessel | 3.65e-09 | 1 |
sinusoid | 3.65e-09 | 1 |
digestive system duct | 3.65e-09 | 1 |
abdominal segment blood vessel | 3.65e-09 | 1 |
trunk blood vessel | 3.65e-09 | 1 |
liver parenchyma | 3.65e-09 | 1 |
liver lobule | 3.65e-09 | 1 |
biliary system | 3.65e-09 | 1 |
biliary tree | 3.65e-09 | 1 |
biliary bud | 3.65e-09 | 1 |
hepatic duct | 3.65e-09 | 1 |
saliva-secreting gland | 5.27e-09 | 1 |
submandibular gland | 5.27e-09 | 1 |
gland of oral region | 5.27e-09 | 1 |
gland of foregut | 5.27e-09 | 1 |
major salivary gland | 5.27e-09 | 1 |
oral gland | 5.27e-09 | 1 |
oral cavity | 5.27e-09 | 1 |
submandibular gland primordium | 5.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.97e-11 | 3 |
muscle cancer | 1.97e-11 | 3 |