FFCP PHASE1:Mm9::chr19:6057925..6057958,+: Difference between revisions
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{{FFCP|EntrezGene=14109|HGNC=|MCL_coexpression_id=81|UniProt=P35545,Q642K5|association_with_transcript=-8bp_to_NM_001190436,uc008ggu.2_5end|description=CAGE_peak_1_at_Fau_5end|id=chr19:6057925..6057958,+|ontology_enrichment_celltype=CL:0000144!7.09e-31!121;CL:0000012!7.09e-31!121;CL:0002371!2.42e-29!118;CL:0000063!3.41e-28!66;CL:0000548!1.83e-27!115;CL:0000004!1.83e-27!115;CL:0000255!1.83e-27!115;CL:0000219!2.51e-23!54;CL:0000034!1.07e-20!97;CL:0002320!1.39e-20!46;CL:0000134!1.39e-20!46;CL:0000723!2.88e-18!91;CL:0000048!2.88e-18!91;CL:0000988!2.29e-17!32;CL:0002032!2.29e-17!32;CL:0000037!2.29e-17!32;CL:0000566!2.29e-17!32;CL:0000837!2.29e-17!32;CL:0002031!2.35e-14!25;CL:0000049!2.61e-10!19;CL:0000738!1.17e-09!17;CL:0002087!1.17e-09!17;CL:0000763!1.05e-08!16;CL:0000838!2.49e-08!12;CL:0000542!3.61e-08!13;CL:0000051!3.61e-08!13;CL:0000084!1.21e-07!11;CL:0000827!1.21e-07!11;CL:0000839!2.31e-07!13;CL:0000066!5.18e-07!25;CL:0000791!6.80e-07!9;CL:0000789!6.80e-07!9;CL:0002420!6.80e-07!9;CL:0002419!6.80e-07!9;CL:0000790!6.80e-07!9|ontology_enrichment_celltype_v019_2=CL:0000219,2.51e-23,54;CL:0000034,1.07e-20,97;CL:0002320,1.39e-20,46;CL:0000134,1.39e-20,46;CL:0000723,2.88e-18,91;CL:0000048,2.88e-18,91;CL:0000988,2.29e-17,32;CL:0002032,2.29e-17,32;CL:0000037,2.29e-17,32;CL:0000837,2.29e-17,32;CL:0002031,2.35e-14,25;CL:0000049,2.61e-10,19;CL:0000738,1.17e-09,17;CL:0002087,1.17e-09,17;CL:0000763,1.05e-08,16;CL:0000838,2.49e-08,12;CL:0000542,3.61e-08,13;CL:0000051,3.61e-08,13;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0000839,2.31e-07,13;CL:0000066,5.18e-07,25;CL:0000791,6.80e-07,9;CL:0000789,6.80e-07,9;CL:0002420,6.80e-07,9;CL:0002419,6.80e-07,9;CL:0000790,6.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.39e-20!46;UBERON:0002371!1.22e-08!16;UBERON:0000344!3.67e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-20,46;UBERON:0002371,1.22e-08,16;UBERON:0000344,3.67e-07,15|phase1_expression=120.2717841757,144.475818762695,173.354710207413,162.725745683075,227.406661395642,125.909453933917,249.03107487483,351.990179701737,374.638789645585,330.967240219299,395.684724569142,232.136982676429,332.471817526402,239.094800615958,83.6105502157313,263.825273408943,270.030884957465,557.737108353364,413.948475055725,590.32600565106,70.8410606958411,96.0143498112561,340.082125458894,305.585527535407,318.878900683366,225.673161897203,225.288523991196,213.101049126344,287.505433637494,160.291162527316,190.466508652907,166.378036446423,137.159447631359,364.507866335509,178.510301006288,211.949172832078,186.202452911281,208.42875210698,326.598174010949,206.268355125677,200.586937418576,237.699828765539,204.885368979147,107.641779369119,99.0452618014657,82.0453982162716,260.536317667897,100.509597091386,96.6619204031676,94.8817907482503,116.468702792302,87.6890642626327,460.731036234544,404.75207524233,305.5092634205,77.1778308107841,77.3640287834643,81.9918626721133,66.3597991619481,51.3121249893872,69.0876229821735,169.422266034566,179.63754881445,169.631096707544,170.08501436152,232.326997587375,121.637644870472,121.412984481611,55.2665633604186,66.9629454125186,71.0898369367671,82.838785477103,77.745726414968,69.8197555525238,58.6574282631607,69.8606277823616,82.5869107495415,56.3101160955678,58.677695703885,72.801230827067,86.7302861350844,80.7415724362978,79.8463377143949,92.8558306552272,59.4385183851791,58.3364599237862,57.6605307236367,65.4262054846805,209.837281726253,134.215090749651,144.932244350839,231.454022907993,73.4369040404371,66.9231957630893,66.9269709971099,50.6270382419989,56.3182124728325,105.496369675818,322.39443171216,338.852651955416,111.266301623578,170.674214961043,89.181833897326,21.3320010945999,241.387510727504,240.945232066819,238.607538046978,56.6352043406537,43.5015644527248,46.3139473882253,90.2123699183906,80.6833517527174,69.1846491768175,79.1293862901268,54.3259826966956,46.873638565969,50.4277734178123,36.5836373007376,29.1921482143459,37.8534428876937,36.2180090275045,38.3051449976825,225.534031073928,39.8181883935704,37.9098539332354,86.5999417157125,194.340131948603,409.733565268497,248.295223700768,55.8719084979989,53.0700699269607,44.6072950000669,47.1063907721069,43.9830586608169,66.9077503481784,50.6192740771404,57.94659803083,54.6146600978308,126.614101975271,39.3526270507706,62.0674512932097,71.0397502699431,64.6423046001204,52.1438669711574,36.1273810493551,41.6369590925762,43.196495022035,33.372734825333,81.4847013286144,49.3566869238008,53.1372394975126,63.5667624039967,50.3265521098332,46.3175381474482,50.4166234199461,61.5015884469144,263.329945242463,294.148657832119,115.938707753402,60.0664740352955,65.6672967947069,71.6647004614839,58.0024602183765,62.7677899274218,62.1696464936134,62.0865632483589,63.5807961317097,51.6102813262889,53.9756307716216,54.9961004664969,44.5067764406748,44.5909961647264,60.1567315897479,51.6694712227431,48.7872680668775,46.6157894078158,68.72710686063,76.6906643324278,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14109 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P35545,uniprot:Q642K5 | |||
|association_with_transcript=-8bp_to_NM_001190436,uc008ggu.2_5end | |||
|cluster_id=chr19:6057925..6057958,+ | |||
|description=CAGE_peak_1_at_Fau_5end | |||
|id=chr19:6057925..6057958,+ | |||
|ontology_enrichment_celltype=CL:0000144!7.09e-31!121;CL:0000012!7.09e-31!121;CL:0002371!2.42e-29!118;CL:0000063!3.41e-28!66;CL:0000548!1.83e-27!115;CL:0000004!1.83e-27!115;CL:0000255!1.83e-27!115;CL:0000219!2.51e-23!54;CL:0000034!1.07e-20!97;CL:0002320!1.39e-20!46;CL:0000134!1.39e-20!46;CL:0000723!2.88e-18!91;CL:0000048!2.88e-18!91;CL:0000988!2.29e-17!32;CL:0002032!2.29e-17!32;CL:0000037!2.29e-17!32;CL:0000566!2.29e-17!32;CL:0000837!2.29e-17!32;CL:0002031!2.35e-14!25;CL:0000049!2.61e-10!19;CL:0000738!1.17e-09!17;CL:0002087!1.17e-09!17;CL:0000763!1.05e-08!16;CL:0000838!2.49e-08!12;CL:0000542!3.61e-08!13;CL:0000051!3.61e-08!13;CL:0000084!1.21e-07!11;CL:0000827!1.21e-07!11;CL:0000839!2.31e-07!13;CL:0000066!5.18e-07!25;CL:0000791!6.80e-07!9;CL:0000789!6.80e-07!9;CL:0002420!6.80e-07!9;CL:0002419!6.80e-07!9;CL:0000790!6.80e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.51e-23,54;CL:0000034,1.07e-20,97;CL:0002320,1.39e-20,46;CL:0000134,1.39e-20,46;CL:0000723,2.88e-18,91;CL:0000048,2.88e-18,91;CL:0000988,2.29e-17,32;CL:0002032,2.29e-17,32;CL:0000037,2.29e-17,32;CL:0000837,2.29e-17,32;CL:0002031,2.35e-14,25;CL:0000049,2.61e-10,19;CL:0000738,1.17e-09,17;CL:0002087,1.17e-09,17;CL:0000763,1.05e-08,16;CL:0000838,2.49e-08,12;CL:0000542,3.61e-08,13;CL:0000051,3.61e-08,13;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0000839,2.31e-07,13;CL:0000066,5.18e-07,25;CL:0000791,6.80e-07,9;CL:0000789,6.80e-07,9;CL:0002420,6.80e-07,9;CL:0002419,6.80e-07,9;CL:0000790,6.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.39e-20!46;UBERON:0002371!1.22e-08!16;UBERON:0000344!3.67e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-20,46;UBERON:0002371,1.22e-08,16;UBERON:0000344,3.67e-07,15 | |||
|phase1_expression=120.2717841757,144.475818762695,173.354710207413,162.725745683075,227.406661395642,125.909453933917,249.03107487483,351.990179701737,374.638789645585,330.967240219299,395.684724569142,232.136982676429,332.471817526402,239.094800615958,83.6105502157313,263.825273408943,270.030884957465,557.737108353364,413.948475055725,590.32600565106,70.8410606958411,96.0143498112561,340.082125458894,305.585527535407,318.878900683366,225.673161897203,225.288523991196,213.101049126344,287.505433637494,160.291162527316,190.466508652907,166.378036446423,137.159447631359,364.507866335509,178.510301006288,211.949172832078,186.202452911281,208.42875210698,326.598174010949,206.268355125677,200.586937418576,237.699828765539,204.885368979147,107.641779369119,99.0452618014657,82.0453982162716,260.536317667897,100.509597091386,96.6619204031676,94.8817907482503,116.468702792302,87.6890642626327,460.731036234544,404.75207524233,305.5092634205,77.1778308107841,77.3640287834643,81.9918626721133,66.3597991619481,51.3121249893872,69.0876229821735,169.422266034566,179.63754881445,169.631096707544,170.08501436152,232.326997587375,121.637644870472,121.412984481611,55.2665633604186,66.9629454125186,71.0898369367671,82.838785477103,77.745726414968,69.8197555525238,58.6574282631607,69.8606277823616,82.5869107495415,56.3101160955678,58.677695703885,72.801230827067,86.7302861350844,80.7415724362978,79.8463377143949,92.8558306552272,59.4385183851791,58.3364599237862,57.6605307236367,65.4262054846805,209.837281726253,134.215090749651,144.932244350839,231.454022907993,73.4369040404371,66.9231957630893,66.9269709971099,50.6270382419989,56.3182124728325,105.496369675818,322.39443171216,338.852651955416,111.266301623578,170.674214961043,89.181833897326,21.3320010945999,241.387510727504,240.945232066819,238.607538046978,56.6352043406537,43.5015644527248,46.3139473882253,90.2123699183906,80.6833517527174,69.1846491768175,79.1293862901268,54.3259826966956,46.873638565969,50.4277734178123,36.5836373007376,29.1921482143459,37.8534428876937,36.2180090275045,38.3051449976825,225.534031073928,39.8181883935704,37.9098539332354,86.5999417157125,194.340131948603,409.733565268497,248.295223700768,55.8719084979989,53.0700699269607,44.6072950000669,47.1063907721069,43.9830586608169,66.9077503481784,50.6192740771404,57.94659803083,54.6146600978308,126.614101975271,39.3526270507706,62.0674512932097,71.0397502699431,64.6423046001204,52.1438669711574,36.1273810493551,41.6369590925762,43.196495022035,33.372734825333,81.4847013286144,49.3566869238008,53.1372394975126,63.5667624039967,50.3265521098332,46.3175381474482,50.4166234199461,61.5015884469144,263.329945242463,294.148657832119,115.938707753402,60.0664740352955,65.6672967947069,71.6647004614839,58.0024602183765,62.7677899274218,62.1696464936134,62.0865632483589,63.5807961317097,51.6102813262889,53.9756307716216,54.9961004664969,44.5067764406748,44.5909961647264,60.1567315897479,51.6694712227431,48.7872680668775,46.6157894078158,68.72710686063,76.6906643324278,74.4375994367966,51.3243044811569,58.6346949015525,52.4377164020691,67.8253033726855,67.3398716438459,65.9595395546871,92.7255115096181,69.6198528376747,83.7606747293245,56.9295134387831,55.7268033365617,73.9192130571454,61.7337947088538,96.5409615851186,59.8662206074979,40.574784842309,59.4661877308318,56.4401737657791,45.0973321894748,36.866901143442,46.3495864655951,44.2736412512677,54.7883407812794,68.1841042300442,70.90916992934,78.8201570403944,74.6542213117714,76.6811258848541,68.0119590501815,83.5172793843057,69.0470729881945,82.2025599749429,85.9377223278695,27.3159592401974,77.4053171150487,67.0880997196305,53.0415643688935,63.327286973235,55.4810049567872,44.3407656399851,91.3348604733737,60.9489011893177,65.1821129376722,60.0807035618565,46.2317270539411,47.3706845363167,40.78293240228,35.1526371356806,34.9914209645064,26.3100368284854,40.9658286789345,41.6170806296808,41.5142798128938,298.566742199759,202.876820064379,49.1764273019036,45.5295631402809,48.8073793562888,53.5657407726369,145.410296549111,37.3656972262472,66.2567260774139,58.5658116444958,47.177724103483,50.4224163679885,51.0208963648682,51.5199286035675,52.6253912177363,61.3737301613755,37.1570511269732,46.2702695647402,36.478601898525,79.9514560465976,49.6805226028407,44.7069033255571,41.1509928853885,116.534705354391,103.09233292498,82.7976300128393,69.1006429341008,63.639075624393,54.0115132721582,49.8041209384183,59.5350621902485,46.457403416565,68.5220955737492,44.3482835967203,62.9813270644508,64.6419327572404,82.9189163047456,72.2315808056466,50.0099458871211,65.1046184247558,64.9968631378378,83.7278610065148,55.3825231030356,54.0171780702741,86.0060752414351,40.0673594647796,32.9387430459647,37.7558910050256,51.2107355773455,45.631170129127,82.4890767662478,42.2769688583962,57.0708741864828,76.982301750282,64.4476955246597,64.610380752609,71.0809984149331,69.7773428279894,164.199163374064,161.364024529178,169.433167884224,95.4670618015113,59.7875027868346,55.3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| |||
|short_description=p1@Fau | |||
}} |
Revision as of 11:35, 4 August 2015
Short description: | p1@Fau |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fau_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -8bp_to_NM_001190436, uc008ggu.2_5end |
EntrezGene: | 14109 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.51e-23 | 54 |
stem cell | 1.07e-20 | 97 |
connective tissue cell | 1.39e-20 | 46 |
mesenchymal cell | 1.39e-20 | 46 |
somatic stem cell | 2.88e-18 | 91 |
multi fate stem cell | 2.88e-18 | 91 |
hematopoietic cell | 2.29e-17 | 32 |
hematopoietic oligopotent progenitor cell | 2.29e-17 | 32 |
hematopoietic stem cell | 2.29e-17 | 32 |
hematopoietic multipotent progenitor cell | 2.29e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 2.35e-14 | 25 |
common myeloid progenitor | 2.61e-10 | 19 |
leukocyte | 1.17e-09 | 17 |
nongranular leukocyte | 1.17e-09 | 17 |
myeloid cell | 1.05e-08 | 16 |
lymphoid lineage restricted progenitor cell | 2.49e-08 | 12 |
lymphocyte | 3.61e-08 | 13 |
common lymphoid progenitor | 3.61e-08 | 13 |
T cell | 1.21e-07 | 11 |
pro-T cell | 1.21e-07 | 11 |
myeloid lineage restricted progenitor cell | 2.31e-07 | 13 |
epithelial cell | 5.18e-07 | 25 |
mature alpha-beta T cell | 6.80e-07 | 9 |
alpha-beta T cell | 6.80e-07 | 9 |
immature T cell | 6.80e-07 | 9 |
mature T cell | 6.80e-07 | 9 |
immature alpha-beta T cell | 6.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.39e-20 | 46 |
bone marrow | 1.22e-08 | 16 |
mucosa | 3.67e-07 | 15 |