FFCP PHASE1:Mm9::chr14:63741287..63741296,+: Difference between revisions
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{{FFCP|EntrezGene=13030|HGNC=|MCL_coexpression_id=866|UniProt=P10605|association_with_transcript=-2bp_to_NM_007798_5end|description=CAGE_peak_4_at_Ctsb_5end|id=chr14:63741287..63741296,+|ontology_enrichment_celltype=CL:0000055!4.88e-15!50;CL:0000221!1.03e-12!44;CL:0000133!1.03e-12!44;CL:0002319!2.18e-12!43;CL:0000393!8.41e-10!39;CL:0000211!8.41e-10!39;CL:0002321!6.24e-08!70;CL:0000220!6.24e-08!70;CL:0000540!1.20e-07!33;CL:0000047!1.20e-07!33;CL:0000031!1.20e-07!33;CL:0000404!1.20e-07!33;CL:0000117!1.84e-07!23;CL:0000337!1.84e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.03e-12,44;CL:0000133,1.03e-12,44;CL:0002319,2.18e-12,43;CL:0000393,8.41e-10,39;CL:0000211,8.41e-10,39;CL:0002321,6.23e-08,70;CL:0000540,1.20e-07,33;CL:0000047,1.20e-07,33;CL:0000031,1.20e-07,33;CL:0000404,1.20e-07,33;CL:0000117,1.84e-07,23;CL:0000337,1.84e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.53e-27!75;UBERON:0001016!3.53e-27!75;UBERON:0001017!2.55e-26!73;UBERON:0005743!2.55e-26!73;UBERON:0004121!1.22e-23!102;UBERON:0000924!1.22e-23!102;UBERON:0006601!1.22e-23!102;UBERON:0001049!3.40e-21!52;UBERON:0005068!3.40e-21!52;UBERON:0006241!3.40e-21!52;UBERON:0007135!3.40e-21!52;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002616!3.68e-20!49;UBERON:0002346!1.18e-18!71;UBERON:0003075!1.18e-18!71;UBERON:0007284!1.18e-18!71;UBERON:0000033!5.49e-16!63;UBERON:0003080!8.29e-15!40;UBERON:0002780!3.83e-14!39;UBERON:0001890!3.83e-14!39;UBERON:0006240!3.83e-14!39;UBERON:0002020!4.93e-14!34;UBERON:0002791!5.92e-12!29;UBERON:0003528!5.92e-12!29;UBERON:0001893!5.92e-12!29;UBERON:0003056!3.19e-11!49;UBERON:0000025!1.83e-10!114;UBERON:0004111!3.54e-10!122;UBERON:0000956!1.65e-08!21;UBERON:0001869!1.65e-08!21;UBERON:0000203!1.65e-08!21;UBERON:0002619!3.99e-08!17;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.53e-27,75;UBERON:0001017,2.55e-26,73;UBERON:0000073,1.80e-22,54;UBERON:0004121,1.85e-21,95;UBERON:0000924,1.85e-21,95;UBERON:0006601,1.85e-21,95;UBERON:0001049,3.40e-21,52;UBERON:0005068,3.40e-21,52;UBERON:0006241,3.40e-21,52;UBERON:0007135,3.40e-21,52;UBERON:0000955,9.07e-19,47;UBERON:0006238,9.07e-19,47;UBERON:0010314,2.15e-18,92;UBERON:0002616,3.16e-18,46;UBERON:0002346,8.91e-17,64;UBERON:0003075,8.91e-17,64;UBERON:0007284,8.91e-17,64;UBERON:0010371,5.52e-16,73;UBERON:0003080,8.29e-15,40;UBERON:0002780,3.83e-14,39;UBERON:0001890,3.83e-14,39;UBERON:0006240,3.83e-14,39;UBERON:0002020,4.93e-14,34;UBERON:0003528,5.92e-12,29;UBERON:0002791,5.92e-12,29;UBERON:0001893,5.92e-12,29;UBERON:0003056,3.18e-11,49;UBERON:0000025,1.83e-10,114;UBERON:0004111,3.54e-10,122;UBERON:0000956,1.65e-08,21;UBERON:0001869,1.65e-08,21;UBERON:0000203,1.65e-08,21;UBERON:0002619,3.99e-08,17;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12|phase1_expression=9.44878197918284,2.09385244583617,4.09499315450582,1.81478526784098,1.50268718983904,1.84667199103079,2.10251376535973,1.93684985162364,0.422366166455,0,0.513653904676515,0.319088635981346,3.25281386869291,1.74840804837995,1.33243904726265,2.42970320867791,2.09868563438444,2.99689057090326,1.91960207048034,1.69755860719212,9.18467533631554,1.98581902401771,3.13439746966722,2.55987876469451,4.35877634027623,6.31655160526522,2.15380998079537,3.01659725760245,4.94060890586572,2.77233142735924,4.21287970245079,0,1.23012957516914,0,1.44425809875637,2.1610503896604,1.83752420636132,3.34825304589526,3.1253413780952,6.80580867165938,5.29408339227913,5.46436387966757,6.79714494243615,15.485308610996,16.0175551326833,15.4179271815813,23.4717403304412,23.3286917327078,32.0741826792329,42.1912880991195,28.4172435899486,14.3752564364972,1.17447824240415,2.90144856804538,2.01656279485478,9.26133969729409,14.3266719969378,12.8918023069361,7.68802551266472,4.7609188134483,8.23980824558033,28.4629406938071,23.1216646988896,35.5460388326153,14.8329954385046,29.1296847127901,18.2756067416227,22.6688800139717,6.11768712620018,5.13022565660425,7.36137364729837,18.852964970651,14.7981922437581,5.14461356702807,6.42164655822184,8.27296907949019,24.2254938198655,24.3882815742709,27.4955694528676,6.98997324970027,10.9785172322892,10.939180781692,34.0603258781685,24.1987922313622,23.8365266531824,10.9012576625257,18.2235751422852,11.5567656411686,8.48133365331661,16.3234569830657,5.79728977403356,8.60423876981386,4.0798280022465,3.2382191498269,1.29955283489534,3.13618820968135,7.8648875273781,14.4865774191349,16.1067322853779,14.4869225549239,10.563256483251,21.815501160434,33.1246811618639,14.2213340630666,5.19578498426914,3.80039798212648,6.0662933401774,3.53970027129086,6.73238497482646,12.4691396814453,5.20455980298408,6.69824052286711,10.8389283710347,6.93324146542064,9.8774513993992,18.598655516792,10.3821886448437,10.4111536982336,4.42305275974937,7.76480879747564,6.8460870722722,4.84875253135222,7.45567044872489,16.6885054296582,17.8029700791437,3.57639877292028,2.75574786363617,2.39961092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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13030 | |||
|HGNC= | |||
|MCL_coexpression_id=866 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P10605 | |||
|association_with_transcript=-2bp_to_NM_007798_5end | |||
|cluster_id=chr14:63741287..63741296,+ | |||
|description=CAGE_peak_4_at_Ctsb_5end | |||
|id=chr14:63741287..63741296,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.88e-15!50;CL:0000221!1.03e-12!44;CL:0000133!1.03e-12!44;CL:0002319!2.18e-12!43;CL:0000393!8.41e-10!39;CL:0000211!8.41e-10!39;CL:0002321!6.24e-08!70;CL:0000220!6.24e-08!70;CL:0000540!1.20e-07!33;CL:0000047!1.20e-07!33;CL:0000031!1.20e-07!33;CL:0000404!1.20e-07!33;CL:0000117!1.84e-07!23;CL:0000337!1.84e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.03e-12,44;CL:0000133,1.03e-12,44;CL:0002319,2.18e-12,43;CL:0000393,8.41e-10,39;CL:0000211,8.41e-10,39;CL:0002321,6.23e-08,70;CL:0000540,1.20e-07,33;CL:0000047,1.20e-07,33;CL:0000031,1.20e-07,33;CL:0000404,1.20e-07,33;CL:0000117,1.84e-07,23;CL:0000337,1.84e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-27!75;UBERON:0001016!3.53e-27!75;UBERON:0001017!2.55e-26!73;UBERON:0005743!2.55e-26!73;UBERON:0004121!1.22e-23!102;UBERON:0000924!1.22e-23!102;UBERON:0006601!1.22e-23!102;UBERON:0001049!3.40e-21!52;UBERON:0005068!3.40e-21!52;UBERON:0006241!3.40e-21!52;UBERON:0007135!3.40e-21!52;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002616!3.68e-20!49;UBERON:0002346!1.18e-18!71;UBERON:0003075!1.18e-18!71;UBERON:0007284!1.18e-18!71;UBERON:0000033!5.49e-16!63;UBERON:0003080!8.29e-15!40;UBERON:0002780!3.83e-14!39;UBERON:0001890!3.83e-14!39;UBERON:0006240!3.83e-14!39;UBERON:0002020!4.93e-14!34;UBERON:0002791!5.92e-12!29;UBERON:0003528!5.92e-12!29;UBERON:0001893!5.92e-12!29;UBERON:0003056!3.19e-11!49;UBERON:0000025!1.83e-10!114;UBERON:0004111!3.54e-10!122;UBERON:0000956!1.65e-08!21;UBERON:0001869!1.65e-08!21;UBERON:0000203!1.65e-08!21;UBERON:0002619!3.99e-08!17;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.53e-27,75;UBERON:0001017,2.55e-26,73;UBERON:0000073,1.80e-22,54;UBERON:0004121,1.85e-21,95;UBERON:0000924,1.85e-21,95;UBERON:0006601,1.85e-21,95;UBERON:0001049,3.40e-21,52;UBERON:0005068,3.40e-21,52;UBERON:0006241,3.40e-21,52;UBERON:0007135,3.40e-21,52;UBERON:0000955,9.07e-19,47;UBERON:0006238,9.07e-19,47;UBERON:0010314,2.15e-18,92;UBERON:0002616,3.16e-18,46;UBERON:0002346,8.91e-17,64;UBERON:0003075,8.91e-17,64;UBERON:0007284,8.91e-17,64;UBERON:0010371,5.52e-16,73;UBERON:0003080,8.29e-15,40;UBERON:0002780,3.83e-14,39;UBERON:0001890,3.83e-14,39;UBERON:0006240,3.83e-14,39;UBERON:0002020,4.93e-14,34;UBERON:0003528,5.92e-12,29;UBERON:0002791,5.92e-12,29;UBERON:0001893,5.92e-12,29;UBERON:0003056,3.18e-11,49;UBERON:0000025,1.83e-10,114;UBERON:0004111,3.54e-10,122;UBERON:0000956,1.65e-08,21;UBERON:0001869,1.65e-08,21;UBERON:0000203,1.65e-08,21;UBERON:0002619,3.99e-08,17;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12 | |||
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| |||
|short_description=p4@Ctsb | |||
}} |
Revision as of 14:58, 4 August 2015
Short description: | p4@Ctsb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ctsb_5end |
Coexpression cluster: | MCL_coexpression_mm9:866 |
Association with transcript: | -2bp_to_NM_007798_5end |
EntrezGene: | 13030 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.03e-12 | 44 |
neurectodermal cell | 1.03e-12 | 44 |
neural cell | 2.18e-12 | 43 |
electrically responsive cell | 8.41e-10 | 39 |
electrically active cell | 8.41e-10 | 39 |
embryonic cell | 6.23e-08 | 70 |
neuron | 1.20e-07 | 33 |
neuronal stem cell | 1.20e-07 | 33 |
neuroblast | 1.20e-07 | 33 |
electrically signaling cell | 1.20e-07 | 33 |
CNS neuron (sensu Vertebrata) | 1.84e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-07 | 23 |