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FFCP PHASE1:Mm9::chr10:70748175..70748193,-: Difference between revisions

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{{FFCP|EntrezGene=216080|HGNC=|MCL_coexpression_id=22|UniProt=P61080,Q3UFQ4|association_with_transcript=-165bp_to_ENSMUST00000020085,NM_145420,uc007foo.2_5end|description=CAGE_peak_4_at_Ube2d1_5end|id=chr10:70748175..70748193,-|ontology_enrichment_celltype=CL:0000117!7.48e-15!23;CL:0000337!7.48e-15!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-34,23;CL:0000337,1.87e-34,23;CL:0000540,2.52e-23,33;CL:0000047,2.52e-23,33;CL:0000031,2.52e-23,33;CL:0000404,2.52e-23,33;CL:0000393,2.23e-19,39;CL:0000211,2.23e-19,39;CL:0002319,2.34e-17,43;CL:0000221,6.57e-17,44;CL:0000133,6.57e-17,44;CL:0000120,5.42e-14,3;CL:0002613,8.90e-14,3;CL:0002612,1.08e-13,3;CL:0002321,9.73e-10,70;CL:0002611,1.81e-09,2;CL:0000723,6.27e-07,91;CL:0000048,6.27e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.73e-09!34;UBERON:0001049!1.01e-08!52;UBERON:0005068!1.01e-08!52;UBERON:0006241!1.01e-08!52;UBERON:0007135!1.01e-08!52;UBERON:0000153!1.87e-07!94;UBERON:0007811!2.35e-07!86;UBERON:0002420!7.59e-07!8;UBERON:0007245!7.59e-07!8;UBERON:0010009!7.59e-07!8;UBERON:0010011!7.59e-07!8;UBERON:0000454!7.59e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.82e-22,34;UBERON:0001948,1.69e-21,5;UBERON:0002315,1.69e-21,5;UBERON:0002240,6.71e-18,6;UBERON:0005174,6.71e-18,6;UBERON:0001137,6.71e-18,6;UBERON:0001017,2.41e-16,73;UBERON:0001049,4.52e-16,52;UBERON:0005068,4.52e-16,52;UBERON:0006241,4.52e-16,52;UBERON:0007135,4.52e-16,52;UBERON:0001016,7.87e-16,75;UBERON:0000073,2.21e-15,54;UBERON:0000369,1.95e-14,5;UBERON:0002435,1.95e-14,5;UBERON:0000204,1.95e-14,5;UBERON:0010082,1.95e-14,5;UBERON:0002257,1.08e-13,3;UBERON:0002420,1.92e-13,8;UBERON:0007245,1.92e-13,8;UBERON:0010009,1.92e-13,8;UBERON:0010011,1.92e-13,8;UBERON:0000454,1.92e-13,8;UBERON:0002346,1.40e-12,64;UBERON:0003075,1.40e-12,64;UBERON:0007284,1.40e-12,64;UBERON:0004121,7.06e-12,95;UBERON:0000924,7.06e-12,95;UBERON:0006601,7.06e-12,95;UBERON:0010371,1.03e-10,73;UBERON:0003528,1.05e-10,29;UBERON:0002791,1.05e-10,29;UBERON:0001893,1.05e-10,29;UBERON:0002256,1.81e-09,2;UBERON:0002780,1.99e-09,39;UBERON:0001890,1.99e-09,39;UBERON:0006240,1.99e-09,39;UBERON:0003080,3.75e-09,40;UBERON:0003076,7.26e-09,12;UBERON:0003057,7.26e-09,12;UBERON:0010314,5.79e-08,92;UBERON:0002616,9.37e-08,46;UBERON:0000955,1.48e-07,47;UBERON:0006238,1.48e-07,47;UBERON:0003056,3.48e-07,49|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.685572168028694,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,1.61853168687678,5.28990979272033,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.420649922702764,1.14260393761521,1.98781686856452,1.95985278743926,0.958454710182364,0.919218786610021,0,0.510749352340751,0,4.08847491963601,4.02545631850602,1.04182674111352,0.279182999001381,1.12552522006336,0.45839474333043,3.24091444021034,1.70846016958924,1.4911955666024,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,3.39266750704734,0.347648640384553,0.255715457330331,0.20778804455956,1.29793010454206,0,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.374806898238915,0,0.431135985865684,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0,0,0,0,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.632022241256357,0.405450430580328,0,0.25984164595559,0.179026695667481,1.19208812868759,0.240390899039938,0.738447635872886,0.403865799792591,0.533447646584999,1.00826185136841,0.877120926657772,1.34696578296461,0.935015217452552,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,1.35942722695261,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,0.37456602987953,0.768301828858431,0.459483751644906,0.476293691283074,0.347652977834566,0,0.824171801606613,0.883193520806384,0,0,0,0.581385666529314,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.543216455383447,0,0.355905054372522,0.394017929502254,0,0.464810523557898,0.771626443924566,0.999242311751784,0.233931608445408,0,0.191288332068843,0.441182838239031,0|short_description=p4@Ube2d1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:216080
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=uniprot:P61080,uniprot:Q3UFQ4
|association_with_transcript=-165bp_to_ENSMUST00000020085,NM_145420,uc007foo.2_5end
|cluster_id=chr10:70748175..70748193,-
|description=CAGE_peak_4_at_Ube2d1_5end
|id=chr10:70748175..70748193,-
|ontology_enrichment_celltype=CL:0000117!7.48e-15!23;CL:0000337!7.48e-15!23;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-34,23;CL:0000337,1.87e-34,23;CL:0000540,2.52e-23,33;CL:0000047,2.52e-23,33;CL:0000031,2.52e-23,33;CL:0000404,2.52e-23,33;CL:0000393,2.23e-19,39;CL:0000211,2.23e-19,39;CL:0002319,2.34e-17,43;CL:0000221,6.57e-17,44;CL:0000133,6.57e-17,44;CL:0000120,5.42e-14,3;CL:0002613,8.90e-14,3;CL:0002612,1.08e-13,3;CL:0002321,9.73e-10,70;CL:0002611,1.81e-09,2;CL:0000723,6.27e-07,91;CL:0000048,6.27e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!5.73e-09!34;UBERON:0001049!1.01e-08!52;UBERON:0005068!1.01e-08!52;UBERON:0006241!1.01e-08!52;UBERON:0007135!1.01e-08!52;UBERON:0000153!1.87e-07!94;UBERON:0007811!2.35e-07!86;UBERON:0002420!7.59e-07!8;UBERON:0007245!7.59e-07!8;UBERON:0010009!7.59e-07!8;UBERON:0010011!7.59e-07!8;UBERON:0000454!7.59e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.82e-22,34;UBERON:0001948,1.69e-21,5;UBERON:0002315,1.69e-21,5;UBERON:0002240,6.71e-18,6;UBERON:0005174,6.71e-18,6;UBERON:0001137,6.71e-18,6;UBERON:0001017,2.41e-16,73;UBERON:0001049,4.52e-16,52;UBERON:0005068,4.52e-16,52;UBERON:0006241,4.52e-16,52;UBERON:0007135,4.52e-16,52;UBERON:0001016,7.87e-16,75;UBERON:0000073,2.21e-15,54;UBERON:0000369,1.95e-14,5;UBERON:0002435,1.95e-14,5;UBERON:0000204,1.95e-14,5;UBERON:0010082,1.95e-14,5;UBERON:0002257,1.08e-13,3;UBERON:0002420,1.92e-13,8;UBERON:0007245,1.92e-13,8;UBERON:0010009,1.92e-13,8;UBERON:0010011,1.92e-13,8;UBERON:0000454,1.92e-13,8;UBERON:0002346,1.40e-12,64;UBERON:0003075,1.40e-12,64;UBERON:0007284,1.40e-12,64;UBERON:0004121,7.06e-12,95;UBERON:0000924,7.06e-12,95;UBERON:0006601,7.06e-12,95;UBERON:0010371,1.03e-10,73;UBERON:0003528,1.05e-10,29;UBERON:0002791,1.05e-10,29;UBERON:0001893,1.05e-10,29;UBERON:0002256,1.81e-09,2;UBERON:0002780,1.99e-09,39;UBERON:0001890,1.99e-09,39;UBERON:0006240,1.99e-09,39;UBERON:0003080,3.75e-09,40;UBERON:0003076,7.26e-09,12;UBERON:0003057,7.26e-09,12;UBERON:0010314,5.79e-08,92;UBERON:0002616,9.37e-08,46;UBERON:0000955,1.48e-07,47;UBERON:0006238,1.48e-07,47;UBERON:0003056,3.48e-07,49
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.685572168028694,0.42438965179803,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,1.61853168687678,5.28990979272033,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.420649922702764,1.14260393761521,1.98781686856452,1.95985278743926,0.958454710182364,0.919218786610021,0,0.510749352340751,0,4.08847491963601,4.02545631850602,1.04182674111352,0.279182999001381,1.12552522006336,0.45839474333043,3.24091444021034,1.70846016958924,1.4911955666024,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,3.39266750704734,0.347648640384553,0.255715457330331,0.20778804455956,1.29793010454206,0,0.124406970610093,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0,0.374806898238915,0,0.431135985865684,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0,0,0,0,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0.481651769963376,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.632022241256357,0.405450430580328,0,0.25984164595559,0.179026695667481,1.19208812868759,0.240390899039938,0.738447635872886,0.403865799792591,0.533447646584999,1.00826185136841,0.877120926657772,1.34696578296461,0.935015217452552,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,1.35942722695261,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,0.37456602987953,0.768301828858431,0.459483751644906,0.476293691283074,0.347652977834566,0,0.824171801606613,0.883193520806384,0,0,0,0.581385666529314,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.543216455383447,0,0.355905054372522,0.394017929502254,0,0.464810523557898,0.771626443924566,0.999242311751784,0.233931608445408,0,0.191288332068843,0.441182838239031,0
|short_description=p4@Ube2d1
}}

Revision as of 16:05, 4 August 2015

Short description:p4@Ube2d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ube2d1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -165bp_to_ENSMUST00000020085, NM_145420, uc007foo.2_5end
EntrezGene:216080
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Ube2d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.82e-2234
regional part of spinal cord1.69e-215
gray matter of spinal cord1.69e-215
spinal cord6.71e-186
dorsal region element6.71e-186
dorsum6.71e-186
central nervous system2.41e-1673
neural tube4.52e-1652
neural rod4.52e-1652
future spinal cord4.52e-1652
neural keel4.52e-1652
nervous system7.87e-1675
regional part of nervous system2.21e-1554
corpus striatum1.95e-145
striatum1.95e-145
ventral part of telencephalon1.95e-145
future corpus striatum1.95e-145
ventral horn of spinal cord1.08e-133
basal ganglion1.92e-138
nuclear complex of neuraxis1.92e-138
aggregate regional part of brain1.92e-138
collection of basal ganglia1.92e-138
cerebral subcortex1.92e-138
neurectoderm1.40e-1264
neural plate1.40e-1264
presumptive neural plate1.40e-1264
ectoderm-derived structure7.06e-1295
ectoderm7.06e-1295
presumptive ectoderm7.06e-1295
ecto-epithelium1.03e-1073
brain grey matter1.05e-1029
regional part of telencephalon1.05e-1029
telencephalon1.05e-1029
dorsal horn of spinal cord1.81e-092
regional part of forebrain1.99e-0939
forebrain1.99e-0939
future forebrain1.99e-0939
anterior neural tube3.75e-0940
posterior neural tube7.26e-0912
chordal neural plate7.26e-0912
structure with developmental contribution from neural crest5.79e-0892
regional part of brain9.37e-0846
brain1.48e-0747
future brain1.48e-0747
pre-chordal neural plate3.48e-0749
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