FFCP PHASE1:Mm9::chr2:19310534..19310552,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:19310534..19310552,-|id=chr2:19310534..19310552,-|ontology_enrichment_celltype=CL:0000838!3.82e-18!12;CL:0000988!2.60e-17!32;CL:0002032!2.60e-17!32;CL:0000037!2.60e-17!32;CL:0000566!2.60e-17!32;CL:0000837!2.60e-17!32;CL:0000542!1.40e-16!13;CL:0000051!1.40e-16!13;CL:0000791!2.42e-16!9;CL:0000789!2.42e-16!9;CL:0002420!2.42e-16!9;CL:0002419!2.42e-16!9;CL:0000790!2.42e-16!9;CL:0000084!3.17e-16!11;CL:0000827!3.17e-16!11;CL:0000738!7.99e-15!17;CL:0002087!7.99e-15!17;CL:0000624!3.06e-14!8;CL:0002031!3.83e-11!25;CL:0002320!8.84e-11!46;CL:0000134!8.84e-11!46;CL:0000893!6.42e-10!6;CL:0002489!6.42e-10!6;CL:0000898!6.42e-10!6;CL:0000809!6.42e-10!6;CL:0000810!6.42e-10!6;CL:0000895!6.42e-10!6;CL:0000808!6.42e-10!6;CL:0000894!6.42e-10!6;CL:0000806!6.42e-10!6;CL:0000807!6.42e-10!6;CL:0000805!6.42e-10!6;CL:0002425!6.42e-10!6;CL:0002436!6.42e-10!6;CL:0002427!6.42e-10!6;CL:0002428!6.42e-10!6;CL:0002429!6.42e-10!6;CL:0002433!6.42e-10!6;CL:0002431!6.42e-10!6;CL:0002432!6.42e-10!6;CL:0000219!1.37e-08!54;CL:0000034!1.89e-07!97|ontology_enrichment_celltype_v019_2=CL:0000791,4.84e-13,9;CL:0000789,4.84e-13,9;CL:0002420,4.84e-13,9;CL:0002419,4.84e-13,9;CL:0000790,4.84e-13,9;CL:0000084,9.97e-11,11;CL:0000827,9.97e-11,11;CL:0000838,7.39e-10,12;CL:0000542,4.03e-09,13;CL:0000051,4.03e-09,13;CL:0000624,9.74e-09,8;CL:0000815,1.47e-08,1;CL:0000792,1.47e-08,1;CL:0000625,2.89e-08,1;CL:0000355,3.29e-08,9;CL:0000988,8.00e-08,32;CL:0002032,8.00e-08,32;CL:0000037,8.00e-08,32;CL:0000837,8.00e-08,32;CL:0000738,4.95e-07,17;CL:0002087,4.95e-07,17|ontology_enrichment_disease=DOID:0060100!1.30e-08!3;DOID:4045!1.30e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.00e-23,3;DOID:4045,2.00e-23,3;DOID:0050686,4.86e-12,6|ontology_enrichment_uberon=UBERON:0002390!1.10e-11!45;UBERON:0003061!1.10e-11!45;UBERON:0004177!1.58e-11!29;UBERON:0002370!4.74e-11!23;UBERON:0000974!4.74e-11!23;UBERON:0004807!4.74e-11!23;UBERON:0005058!4.74e-11!23;UBERON:0003351!4.74e-11!23;UBERON:0009113!4.74e-11!23;UBERON:0003295!4.74e-11!23;UBERON:0009722!4.74e-11!23;UBERON:0005562!4.74e-11!23;UBERON:0007690!4.74e-11!23;UBERON:0002384!8.84e-11!46;UBERON:0002193!1.07e-10!48;UBERON:0006562!1.75e-10!24;UBERON:0003408!1.75e-10!24;UBERON:0001557!1.75e-10!24;UBERON:0001042!1.75e-10!24;UBERON:0008814!1.75e-10!24;UBERON:0009145!1.75e-10!24;UBERON:0000072!4.84e-09!27;UBERON:0002405!7.44e-08!70;UBERON:0005057!3.55e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.29e-08,9;UBERON:0002036,3.29e-08,9;UBERON:0002385,3.29e-08,9;UBERON:0000486,3.29e-08,9;UBERON:0007503,3.29e-08,9;UBERON:0001015,3.29e-08,9;UBERON:0002329,3.29e-08,9;UBERON:0003082,3.29e-08,9;UBERON:0003059,3.29e-08,9;UBERON:0007282,3.29e-08,9;UBERON:0004290,3.29e-08,9;UBERON:0009618,3.29e-08,9;UBERON:0000383,1.94e-07,10;UBERON:0007524,8.31e-07,11;UBERON:0003077,8.31e-07,11;UBERON:0007285,8.31e-07,11|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.985521055061667,0.936258105287974,0.513653904676515,0,1.19840510951844,0.786783621770977,0,0,0,0,0,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.9386948233332,8.37637990358077,40.58797267414,4.78131839470912,6.79714494243615,0,0,0,0,0,0,0,0,0,0.503347818173209,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370389054739423,0,0.27338845544205,0,0.509935289981566,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr2:19310534..19310552,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:19310534..19310552,- | |||
|description=CAGE_peak_at_chr2:19310534..19310552,- | |||
|id=chr2:19310534..19310552,- | |||
|ontology_enrichment_celltype=CL:0000838!3.82e-18!12;CL:0000988!2.60e-17!32;CL:0002032!2.60e-17!32;CL:0000037!2.60e-17!32;CL:0000566!2.60e-17!32;CL:0000837!2.60e-17!32;CL:0000542!1.40e-16!13;CL:0000051!1.40e-16!13;CL:0000791!2.42e-16!9;CL:0000789!2.42e-16!9;CL:0002420!2.42e-16!9;CL:0002419!2.42e-16!9;CL:0000790!2.42e-16!9;CL:0000084!3.17e-16!11;CL:0000827!3.17e-16!11;CL:0000738!7.99e-15!17;CL:0002087!7.99e-15!17;CL:0000624!3.06e-14!8;CL:0002031!3.83e-11!25;CL:0002320!8.84e-11!46;CL:0000134!8.84e-11!46;CL:0000893!6.42e-10!6;CL:0002489!6.42e-10!6;CL:0000898!6.42e-10!6;CL:0000809!6.42e-10!6;CL:0000810!6.42e-10!6;CL:0000895!6.42e-10!6;CL:0000808!6.42e-10!6;CL:0000894!6.42e-10!6;CL:0000806!6.42e-10!6;CL:0000807!6.42e-10!6;CL:0000805!6.42e-10!6;CL:0002425!6.42e-10!6;CL:0002436!6.42e-10!6;CL:0002427!6.42e-10!6;CL:0002428!6.42e-10!6;CL:0002429!6.42e-10!6;CL:0002433!6.42e-10!6;CL:0002431!6.42e-10!6;CL:0002432!6.42e-10!6;CL:0000219!1.37e-08!54;CL:0000034!1.89e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.84e-13,9;CL:0000789,4.84e-13,9;CL:0002420,4.84e-13,9;CL:0002419,4.84e-13,9;CL:0000790,4.84e-13,9;CL:0000084,9.97e-11,11;CL:0000827,9.97e-11,11;CL:0000838,7.39e-10,12;CL:0000542,4.03e-09,13;CL:0000051,4.03e-09,13;CL:0000624,9.74e-09,8;CL:0000815,1.47e-08,1;CL:0000792,1.47e-08,1;CL:0000625,2.89e-08,1;CL:0000355,3.29e-08,9;CL:0000988,8.00e-08,32;CL:0002032,8.00e-08,32;CL:0000037,8.00e-08,32;CL:0000837,8.00e-08,32;CL:0000738,4.95e-07,17;CL:0002087,4.95e-07,17 | |||
|ontology_enrichment_disease=DOID:0060100!1.30e-08!3;DOID:4045!1.30e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.00e-23,3;DOID:4045,2.00e-23,3;DOID:0050686,4.86e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-11!45;UBERON:0003061!1.10e-11!45;UBERON:0004177!1.58e-11!29;UBERON:0002370!4.74e-11!23;UBERON:0000974!4.74e-11!23;UBERON:0004807!4.74e-11!23;UBERON:0005058!4.74e-11!23;UBERON:0003351!4.74e-11!23;UBERON:0009113!4.74e-11!23;UBERON:0003295!4.74e-11!23;UBERON:0009722!4.74e-11!23;UBERON:0005562!4.74e-11!23;UBERON:0007690!4.74e-11!23;UBERON:0002384!8.84e-11!46;UBERON:0002193!1.07e-10!48;UBERON:0006562!1.75e-10!24;UBERON:0003408!1.75e-10!24;UBERON:0001557!1.75e-10!24;UBERON:0001042!1.75e-10!24;UBERON:0008814!1.75e-10!24;UBERON:0009145!1.75e-10!24;UBERON:0000072!4.84e-09!27;UBERON:0002405!7.44e-08!70;UBERON:0005057!3.55e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.29e-08,9;UBERON:0002036,3.29e-08,9;UBERON:0002385,3.29e-08,9;UBERON:0000486,3.29e-08,9;UBERON:0007503,3.29e-08,9;UBERON:0001015,3.29e-08,9;UBERON:0002329,3.29e-08,9;UBERON:0003082,3.29e-08,9;UBERON:0003059,3.29e-08,9;UBERON:0007282,3.29e-08,9;UBERON:0004290,3.29e-08,9;UBERON:0009618,3.29e-08,9;UBERON:0000383,1.94e-07,10;UBERON:0007524,8.31e-07,11;UBERON:0003077,8.31e-07,11;UBERON:0007285,8.31e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,0.985521055061667,0.936258105287974,0.513653904676515,0,1.19840510951844,0.786783621770977,0,0,0,0,0,0.42438965179803,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.9386948233332,8.37637990358077,40.58797267414,4.78131839470912,6.79714494243615,0,0,0,0,0,0,0,0,0,0.503347818173209,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370389054739423,0,0.27338845544205,0,0.509935289981566,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr2:19310534..19310552,- | |||
}} |
Latest revision as of 18:56, 4 August 2015
Short description: | p@chr2:19310534..19310552, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:19310534..19310552, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.84e-13 | 9 |
alpha-beta T cell | 4.84e-13 | 9 |
immature T cell | 4.84e-13 | 9 |
mature T cell | 4.84e-13 | 9 |
immature alpha-beta T cell | 4.84e-13 | 9 |
T cell | 9.97e-11 | 11 |
pro-T cell | 9.97e-11 | 11 |
lymphoid lineage restricted progenitor cell | 7.39e-10 | 12 |
lymphocyte | 4.03e-09 | 13 |
common lymphoid progenitor | 4.03e-09 | 13 |
CD4-positive, alpha-beta T cell | 9.74e-09 | 8 |
regulatory T cell | 1.47e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.47e-08 | 1 |
CD8-positive, alpha-beta T cell | 2.89e-08 | 1 |
multi-potent skeletal muscle stem cell | 3.29e-08 | 9 |
hematopoietic cell | 8.00e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.00e-08 | 32 |
hematopoietic stem cell | 8.00e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.00e-08 | 32 |
leukocyte | 4.95e-07 | 17 |
nongranular leukocyte | 4.95e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.29e-08 | 9 |
striated muscle tissue | 3.29e-08 | 9 |
muscle tissue | 3.29e-08 | 9 |
multilaminar epithelium | 3.29e-08 | 9 |
epithelial vesicle | 3.29e-08 | 9 |
musculature | 3.29e-08 | 9 |
somite | 3.29e-08 | 9 |
myotome | 3.29e-08 | 9 |
presomitic mesoderm | 3.29e-08 | 9 |
presumptive segmental plate | 3.29e-08 | 9 |
dermomyotome | 3.29e-08 | 9 |
trunk paraxial mesoderm | 3.29e-08 | 9 |
musculature of body | 1.94e-07 | 10 |
dense mesenchyme tissue | 8.31e-07 | 11 |
paraxial mesoderm | 8.31e-07 | 11 |
presumptive paraxial mesoderm | 8.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.00e-23 | 3 |
muscle cancer | 2.00e-23 | 3 |
organ system cancer | 4.86e-12 | 6 |