FFCP PHASE1:Mm9::chr14:76814539..76814600,+: Difference between revisions
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{{FFCP|EntrezGene=21807|HGNC=|MCL_coexpression_id=2943|UniProt=D3Z0V7|association_with_transcript=-167bp_to_ENSMUST00000110888,uc007urh.1_5end|description=CAGE_peak_2_at_Tsc22d1_5end|id=chr14:76814539..76814600,+|ontology_enrichment_celltype=CL:0000117!5.07e-11!23;CL:0000337!5.07e-11!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0002319!5.02e-09!43;CL:0000221!1.36e-08!44;CL:0000133!1.36e-08!44;CL:0000393!2.21e-08!39;CL:0000211!2.21e-08!39;CL:0000055!7.30e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-11,23;CL:0000337,5.05e-11,23;CL:0000540,1.97e-10,33;CL:0000047,1.97e-10,33;CL:0000031,1.97e-10,33;CL:0000404,1.97e-10,33;CL:0002319,5.01e-09,43;CL:0000221,1.35e-08,44;CL:0000133,1.35e-08,44;CL:0000393,2.20e-08,39;CL:0000211,2.20e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.66e-25!73;UBERON:0005743!2.66e-25!73;UBERON:0000073!3.94e-24!75;UBERON:0001016!3.94e-24!75;UBERON:0000955!2.01e-22!50;UBERON:0006238!2.01e-22!50;UBERON:0001049!7.81e-22!52;UBERON:0005068!7.81e-22!52;UBERON:0006241!7.81e-22!52;UBERON:0007135!7.81e-22!52;UBERON:0002616!9.94e-22!49;UBERON:0000033!3.33e-20!63;UBERON:0004121!1.08e-19!102;UBERON:0000924!1.08e-19!102;UBERON:0006601!1.08e-19!102;UBERON:0003080!2.60e-18!40;UBERON:0002780!1.19e-17!39;UBERON:0001890!1.19e-17!39;UBERON:0006240!1.19e-17!39;UBERON:0002346!3.52e-17!71;UBERON:0003075!3.52e-17!71;UBERON:0007284!3.52e-17!71;UBERON:0002020!4.73e-17!34;UBERON:0003056!1.46e-16!49;UBERON:0002791!4.67e-16!29;UBERON:0003528!4.67e-16!29;UBERON:0001893!4.67e-16!29;UBERON:0007811!9.16e-14!86;UBERON:0000153!9.76e-14!94;UBERON:0000956!6.04e-12!21;UBERON:0001869!6.04e-12!21;UBERON:0000203!6.04e-12!21;UBERON:0000468!1.26e-10!333;UBERON:0002619!7.37e-10!17;UBERON:0000922!2.81e-08!328;UBERON:0002021!2.67e-07!10;UBERON:0000411!2.67e-07!10;UBERON:0001950!2.67e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.65e-25,73;UBERON:0001016,3.91e-24,75;UBERON:0000073,5.23e-23,54;UBERON:0004121,6.86e-22,95;UBERON:0000924,6.86e-22,95;UBERON:0006601,6.86e-22,95;UBERON:0001049,7.77e-22,52;UBERON:0005068,7.77e-22,52;UBERON:0006241,7.77e-22,52;UBERON:0007135,7.77e-22,52;UBERON:0000955,1.49e-20,47;UBERON:0006238,1.49e-20,47;UBERON:0002346,5.84e-20,64;UBERON:0003075,5.84e-20,64;UBERON:0007284,5.84e-20,64;UBERON:0002616,7.12e-20,46;UBERON:0003080,2.59e-18,40;UBERON:0002780,1.19e-17,39;UBERON:0001890,1.19e-17,39;UBERON:0006240,1.19e-17,39;UBERON:0010371,3.41e-17,73;UBERON:0002020,4.71e-17,34;UBERON:0003056,1.45e-16,49;UBERON:0003528,4.65e-16,29;UBERON:0002791,4.65e-16,29;UBERON:0001893,4.65e-16,29;UBERON:0010314,4.19e-14,92;UBERON:0000956,6.02e-12,21;UBERON:0001869,6.02e-12,21;UBERON:0000203,6.02e-12,21;UBERON:0002619,7.35e-10,17;UBERON:0000922,2.25e-07,320;UBERON:0002021,2.67e-07,10;UBERON:0000411,2.67e-07,10;UBERON:0001950,2.67e-07,10|phase1_expression=12.0111635328595,10.1202868215415,5.0049916332849,2.72217790176147,2.50447864973174,4.53274034162102,5.84031601488814,7.36002943616985,7.46180227403834,5.38348410540585,4.96532107853964,6.06268408364557,3.25281386869291,4.72070173062586,1.99865857089398,1.01237633694913,0,1.57731082679119,1.50825876966313,0.84877930359606,17.8590909317247,0.794327609607082,0.522399578277871,6.55968933452967,5.50582274561208,1.72269589234506,3.4460959692726,3.66301095566011,1.71021077510736,1.00812051903972,3.99114919179548,1.90509202037889,1.84519436275371,0,5.19932915552294,2.49351968037739,3.87921776898501,0,0.7813353445238,0,0,0,0.485510353031154,9.81995180209503,7.40051597902456,12.114085642671,4.69434806608824,18.0960879795771,14.2796018777407,18.6652703111312,10.2190087786515,12.9377307928474,0.671130424230945,5.07753499407941,1.68046899571232,6.94600477297057,10.601737277734,14.4388185837684,26.0988234508881,28.0365219014177,42.466704034914,3.38844532069132,3.55717918444456,10.7987966073768,13.8441290759376,10.6572017241915,13.7816050838466,14.6002956022191,29.8626083448416,30.2413301862987,26.5009451302741,15.1395021734016,14.5773237028065,25.7230678351403,29.2328686605621,35.8495326777908,37.4393995397922,30.9003358166154,41.012944379417,26.509143833769,30.0079471015904,36.98484930953,24.8472869111229,23.6360296213306,32.8516232720142,21.8025153250514,20.5015220350708,19.9447407033072,6.6639050133202,10.58001841495,8.40607017234866,0,0,0.539703191637817,0,0,9.69066498909088,13.4639954836666,5.71529210126311,12.0135455333516,8.16891834704747,25.6652954828636,25.4805239706646,42.6640021891999,2.81438353314578,0.760079596425296,1.51657333504435,6.39429726426736,22.2686579936568,13.9535610720935,6.7659277438793,10.3518262626128,7.84092690670599,8.28974523039424,14.1106448562846,6.53466274914312,23.4835219347655,16.4843266888699,12.3845477272982,15.6913844448987,13.0296495891632,12.1218813283806,14.9113408974498,32.2058876712702,28.4847521266299,6.38642638021478,4.91242010474273,2.99951365496704,4.19331749341113,42.3907509515648,47.5800626931372,32.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21807 | |||
|HGNC= | |||
|MCL_coexpression_id=2943 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z0V7 | |||
|association_with_transcript=-167bp_to_ENSMUST00000110888,uc007urh.1_5end | |||
|cluster_id=chr14:76814539..76814600,+ | |||
|description=CAGE_peak_2_at_Tsc22d1_5end | |||
|id=chr14:76814539..76814600,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.07e-11!23;CL:0000337!5.07e-11!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0002319!5.02e-09!43;CL:0000221!1.36e-08!44;CL:0000133!1.36e-08!44;CL:0000393!2.21e-08!39;CL:0000211!2.21e-08!39;CL:0000055!7.30e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-11,23;CL:0000337,5.05e-11,23;CL:0000540,1.97e-10,33;CL:0000047,1.97e-10,33;CL:0000031,1.97e-10,33;CL:0000404,1.97e-10,33;CL:0002319,5.01e-09,43;CL:0000221,1.35e-08,44;CL:0000133,1.35e-08,44;CL:0000393,2.20e-08,39;CL:0000211,2.20e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-25!73;UBERON:0005743!2.66e-25!73;UBERON:0000073!3.94e-24!75;UBERON:0001016!3.94e-24!75;UBERON:0000955!2.01e-22!50;UBERON:0006238!2.01e-22!50;UBERON:0001049!7.81e-22!52;UBERON:0005068!7.81e-22!52;UBERON:0006241!7.81e-22!52;UBERON:0007135!7.81e-22!52;UBERON:0002616!9.94e-22!49;UBERON:0000033!3.33e-20!63;UBERON:0004121!1.08e-19!102;UBERON:0000924!1.08e-19!102;UBERON:0006601!1.08e-19!102;UBERON:0003080!2.60e-18!40;UBERON:0002780!1.19e-17!39;UBERON:0001890!1.19e-17!39;UBERON:0006240!1.19e-17!39;UBERON:0002346!3.52e-17!71;UBERON:0003075!3.52e-17!71;UBERON:0007284!3.52e-17!71;UBERON:0002020!4.73e-17!34;UBERON:0003056!1.46e-16!49;UBERON:0002791!4.67e-16!29;UBERON:0003528!4.67e-16!29;UBERON:0001893!4.67e-16!29;UBERON:0007811!9.16e-14!86;UBERON:0000153!9.76e-14!94;UBERON:0000956!6.04e-12!21;UBERON:0001869!6.04e-12!21;UBERON:0000203!6.04e-12!21;UBERON:0000468!1.26e-10!333;UBERON:0002619!7.37e-10!17;UBERON:0000922!2.81e-08!328;UBERON:0002021!2.67e-07!10;UBERON:0000411!2.67e-07!10;UBERON:0001950!2.67e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.65e-25,73;UBERON:0001016,3.91e-24,75;UBERON:0000073,5.23e-23,54;UBERON:0004121,6.86e-22,95;UBERON:0000924,6.86e-22,95;UBERON:0006601,6.86e-22,95;UBERON:0001049,7.77e-22,52;UBERON:0005068,7.77e-22,52;UBERON:0006241,7.77e-22,52;UBERON:0007135,7.77e-22,52;UBERON:0000955,1.49e-20,47;UBERON:0006238,1.49e-20,47;UBERON:0002346,5.84e-20,64;UBERON:0003075,5.84e-20,64;UBERON:0007284,5.84e-20,64;UBERON:0002616,7.12e-20,46;UBERON:0003080,2.59e-18,40;UBERON:0002780,1.19e-17,39;UBERON:0001890,1.19e-17,39;UBERON:0006240,1.19e-17,39;UBERON:0010371,3.41e-17,73;UBERON:0002020,4.71e-17,34;UBERON:0003056,1.45e-16,49;UBERON:0003528,4.65e-16,29;UBERON:0002791,4.65e-16,29;UBERON:0001893,4.65e-16,29;UBERON:0010314,4.19e-14,92;UBERON:0000956,6.02e-12,21;UBERON:0001869,6.02e-12,21;UBERON:0000203,6.02e-12,21;UBERON:0002619,7.35e-10,17;UBERON:0000922,2.25e-07,320;UBERON:0002021,2.67e-07,10;UBERON:0000411,2.67e-07,10;UBERON:0001950,2.67e-07,10 | |||
|phase1_expression=12.0111635328595,10.1202868215415,5.0049916332849,2.72217790176147,2.50447864973174,4.53274034162102,5.84031601488814,7.36002943616985,7.46180227403834,5.38348410540585,4.96532107853964,6.06268408364557,3.25281386869291,4.72070173062586,1.99865857089398,1.01237633694913,0,1.57731082679119,1.50825876966313,0.84877930359606,17.8590909317247,0.794327609607082,0.522399578277871,6.55968933452967,5.50582274561208,1.72269589234506,3.4460959692726,3.66301095566011,1.71021077510736,1.00812051903972,3.99114919179548,1.90509202037889,1.84519436275371,0,5.19932915552294,2.49351968037739,3.87921776898501,0,0.7813353445238,0,0,0,0.485510353031154,9.81995180209503,7.40051597902456,12.114085642671,4.69434806608824,18.0960879795771,14.2796018777407,18.6652703111312,10.2190087786515,12.9377307928474,0.671130424230945,5.07753499407941,1.68046899571232,6.94600477297057,10.601737277734,14.4388185837684,26.0988234508881,28.0365219014177,42.466704034914,3.38844532069132,3.55717918444456,10.7987966073768,13.8441290759376,10.6572017241915,13.7816050838466,14.6002956022191,29.8626083448416,30.2413301862987,26.5009451302741,15.1395021734016,14.5773237028065,25.7230678351403,29.2328686605621,35.8495326777908,37.4393995397922,30.9003358166154,41.012944379417,26.509143833769,30.0079471015904,36.98484930953,24.8472869111229,23.6360296213306,32.8516232720142,21.8025153250514,20.5015220350708,19.9447407033072,6.6639050133202,10.58001841495,8.40607017234866,0,0,0.539703191637817,0,0,9.69066498909088,13.4639954836666,5.71529210126311,12.0135455333516,8.16891834704747,25.6652954828636,25.4805239706646,42.6640021891999,2.81438353314578,0.760079596425296,1.51657333504435,6.39429726426736,22.2686579936568,13.9535610720935,6.7659277438793,10.3518262626128,7.84092690670599,8.28974523039424,14.1106448562846,6.53466274914312,23.4835219347655,16.4843266888699,12.3845477272982,15.6913844448987,13.0296495891632,12.1218813283806,14.9113408974498,32.2058876712702,28.4847521266299,6.38642638021478,4.91242010474273,2.99951365496704,4.19331749341113,42.3907509515648,47.5800626931372,32.2931684930062,52.6687690182598,41.9373350021742,40.7264567336738,37.6399730317198,8.55450656342657,13.6847667671102,16.1742565397552,12.8369532090749,11.0602376518298,5.9774547152703,10.803727788321,14.7690721479001,14.6958838166868,13.5800543501941,13.3056448874815,21.9897865128163,5.17363183038821,13.9938499324186,16.5394056714112,7.45265490253754,12.7901734643775,15.6713474934975,13.5816210029243,12.3401245427466,2.1066395619397,3.08817488537658,3.40996199274711,12.2204205795946,12.195355119017,10.2635375032778,14.678173606283,12.9864392953287,12.0328348052155,11.8592311822708,16.0964040839772,11.3262382096154,9.70903114489535,9.85004784474571,10.3768076218695,8.47959927066927,10.9775057645525,12.0785776884335,49.4181379125699,24.6971069710283,8.92130714056255,10.5780226665418,11.9441420299731,8.82499353069666,12.5001437482431,14.117846723634,17.7902435075896,9.3210556795154,7.59246498471219,11.3642278759568,12.3154252312132,12.3353012665514,13.4525220112193,9.88701349519644,14.2651112917298,11.948476395262,7.39704813717019,11.4248512609729,19.1603150644237,14.6628956048626,14.7403890247396,12.3439043006961,11.2561036081178,9.00421902675573,12.7168969551514,9.13139013021324,0.296452627087149,3.50374722003798,3.93117990226406,1.12431056192427,2.43432145666204,1.4470629585145,3.8193877767213,3.45235364940973,2.2698931748505,1.09824565275233,7.18841032636773,4.09355042435354,1.87222603868736,1.26289438973556,1.07638448113147,0.964887042726734,12.7479701214957,5.49525094134406,8.63714375142737,12.2216461758135,13.6120344007331,18.0906758037161,18.3293603482231,14.0496226457615,15.2906089783005,10.1873757238436,13.3942005672289,15.7308782127108,9.32498902075836,13.8863096238251,25.6345182696763,8.15858525728064,7.37646409528554,8.82997588175144,36.9266356971921,38.3282215156504,2.29508923527346,29.0341566285029,12.9358369960665,10.5418460960092,16.1567548299599,16.7278158566786,13.590719119026,19.8153571552183,10.1202675418724,17.2430956167674,16.2067988958075,42.4144137676785,26.6847360191545,10.1497394090335,10.5876523579824,32.664084348562,10.619611067197,8.25454162926937,7.86041248108353,11.6935149448657,12.993283286754,16.908933136916,11.3708448994017,6.18007340111759,11.0514187299264,15.1697643809192,6.32511651449993,12.3762651897824,30.9800041235947,14.4048875225048,10.4780533864031,14.1462443120851,19.6847659342924,13.9127677729615,18.4294903074375,15.5277124048446,17.1310346886509,14.8282449604674,23.155481795771,29.8444117824079,14.8547272560233,9.16756458907969,7.99794704821014,9.35603128546849,11.9507143018239,43.3895206704593,5.63873906632914,8.66824845445534,7.59297562215818,2.44878994106098,3.41735569302563,4.57556346413045,3.73952545986482,2.23922323717853,3.04039942369732,12.4107180341965,11.0717597753397,12.1991680276109,12.3126088536853,13.7998275369549,12.6650286972783,10.1148259788616,11.4888303458217,7.85267825952089,15.4241818217234,11.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| |||
|short_description=p2@Tsc22d1 | |||
}} |
Revision as of 20:11, 4 August 2015
Short description: | p2@Tsc22d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tsc22d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2943 |
Association with transcript: | -167bp_to_ENSMUST00000110888, uc007urh.1_5end |
EntrezGene: | 21807 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.05e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-11 | 23 |
neuron | 1.97e-10 | 33 |
neuronal stem cell | 1.97e-10 | 33 |
neuroblast | 1.97e-10 | 33 |
electrically signaling cell | 1.97e-10 | 33 |
neural cell | 5.01e-09 | 43 |
ectodermal cell | 1.35e-08 | 44 |
neurectodermal cell | 1.35e-08 | 44 |
electrically responsive cell | 2.20e-08 | 39 |
electrically active cell | 2.20e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.65e-25 | 73 |
nervous system | 3.91e-24 | 75 |
regional part of nervous system | 5.23e-23 | 54 |
ectoderm-derived structure | 6.86e-22 | 95 |
ectoderm | 6.86e-22 | 95 |
presumptive ectoderm | 6.86e-22 | 95 |
neural tube | 7.77e-22 | 52 |
neural rod | 7.77e-22 | 52 |
future spinal cord | 7.77e-22 | 52 |
neural keel | 7.77e-22 | 52 |
brain | 1.49e-20 | 47 |
future brain | 1.49e-20 | 47 |
neurectoderm | 5.84e-20 | 64 |
neural plate | 5.84e-20 | 64 |
presumptive neural plate | 5.84e-20 | 64 |
regional part of brain | 7.12e-20 | 46 |
anterior neural tube | 2.59e-18 | 40 |
regional part of forebrain | 1.19e-17 | 39 |
forebrain | 1.19e-17 | 39 |
future forebrain | 1.19e-17 | 39 |
ecto-epithelium | 3.41e-17 | 73 |
gray matter | 4.71e-17 | 34 |
pre-chordal neural plate | 1.45e-16 | 49 |
brain grey matter | 4.65e-16 | 29 |
regional part of telencephalon | 4.65e-16 | 29 |
telencephalon | 4.65e-16 | 29 |
structure with developmental contribution from neural crest | 4.19e-14 | 92 |
cerebral cortex | 6.02e-12 | 21 |
cerebral hemisphere | 6.02e-12 | 21 |
pallium | 6.02e-12 | 21 |
regional part of cerebral cortex | 7.35e-10 | 17 |
embryo | 2.25e-07 | 320 |
occipital lobe | 2.67e-07 | 10 |
visual cortex | 2.67e-07 | 10 |
neocortex | 2.67e-07 | 10 |