FFCP PHASE1:Mm9::chr7:26472857..26472901,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=322|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:26472857..26472901,+|id=chr7:26472857..26472901,+|ontology_enrichment_celltype=CL:0000988!6.57e-09!32;CL:0002032!6.57e-09!32;CL:0000037!6.57e-09!32;CL:0000566!6.57e-09!32;CL:0000837!6.57e-09!32;CL:0000049!7.48e-09!19;CL:0000763!4.52e-08!16;CL:0002320!1.66e-07!46;CL:0000134!1.66e-07!46;CL:0002031!2.20e-07!25;CL:0000839!3.03e-07!13|ontology_enrichment_celltype_v019_2=CL:0000049,2.32e-10,19;CL:0000763,2.03e-09,16;CL:0000988,1.68e-08,32;CL:0002032,1.68e-08,32;CL:0000037,1.68e-08,32;CL:0000837,1.68e-08,32;CL:0000839,2.01e-08,13;CL:0002320,2.57e-08,46;CL:0000134,2.57e-08,46;CL:0002031,4.66e-07,25;CL:0000050,7.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.12e-14!45;UBERON:0003061!2.12e-14!45;UBERON:0002193!6.17e-14!48;UBERON:0002405!1.87e-13!70;UBERON:0003081!6.54e-13!88;UBERON:0000926!3.44e-10!193;UBERON:0004120!3.44e-10!193;UBERON:0006603!3.44e-10!193;UBERON:0001474!7.02e-08!22;UBERON:0004765!7.02e-08!22;UBERON:0001434!7.02e-08!22;UBERON:0002371!7.18e-08!16;UBERON:0004177!8.97e-08!29;UBERON:0005057!1.64e-07!51;UBERON:0002384!1.66e-07!46;UBERON:0002204!2.28e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.74e-18,45;UBERON:0003061,4.74e-18,45;UBERON:0002193,7.32e-17,48;UBERON:0002405,7.32e-17,48;UBERON:0003081,5.65e-14,87;UBERON:0000926,2.17e-10,120;UBERON:0004120,2.17e-10,120;UBERON:0006603,2.17e-10,120;UBERON:0004177,6.40e-10,29;UBERON:0005057,6.40e-10,29;UBERON:0001474,9.76e-10,22;UBERON:0004765,9.76e-10,22;UBERON:0001434,9.76e-10,22;UBERON:0002371,3.54e-09,16;UBERON:0000077,1.12e-08,35;UBERON:0002384,2.57e-08,46;UBERON:0002204,2.68e-08,32;UBERON:0000072,5.56e-07,27|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0.16787927191189,0,0.903863264091034,6.61706994112834,9.83071010552373,5.47897498321616,7.0199499915896,0.342401459862411,0.524522414513984,9.99329285446988,15.1856450542369,20.2872944657163,2.05050407482854,1.64537320326887,2.54633791078818,1.19060606211498,3.87234709683453,2.08959831311148,0.319984845586813,0.91763712426868,0,0,0,0.190023419456374,0,0.221730510655305,26.6712882853045,38.7490816178279,47.5445043046316,0,0.166234645358492,0,3.34825304589526,3.1253413780952,1.0470474879476,0,0.683045484958446,1.94204141212461,0.881277725829041,0.405507724878058,0.183546752161682,2.34717403304412,0,0,0,0.839918529752175,0,0.671130424230945,0.725362142011344,0.672187598284928,2.57259436035947,2.0057340795713,1.03134418455488,0,0.528990979272033,0,0.677689064138264,2.66788438833342,8.09909745553259,10.8775299882367,12.7886420690298,2.99600110518405,4.61061966385865,0.103689612308478,0.270011876663381,0.210324961351382,0,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0,0,0,0.0914876436024097,1.04182674111352,0.279182999001381,0,0,0.294628585473668,0,0,0.681535739998656,0.982430281388212,0,1.72084775396277,0,0,0,0,1.26399978118577,1.36344258062446,2.59786004602869,1.06001872353102,0,0,0,0,4.97929394325792,3.29367825117628,2.52762222507392,0.45673551887624,2.33044095282455,0.29688427812965,2.60227990149204,0.304465478312141,0.922461989024234,0.753613202763113,1.05829836422134,0,0.988779870937496,0.578397427679647,6.19227386364912,3.39710384889559,8.39197770149496,4.84875253135222,1.86391761218122,0.585561594023094,0.209446706813455,0,3.35482348616577,2.99951365496704,1.52484272487678,0,0,0,0,0,0,0,1.01839363850316,4.72746488318353,3.53811861807145,0.631325567659422,0.910843100738926,0.229902104433473,0.720248519221397,0.60281927134286,0.136072998302656,0.2562274405697,0.281105173679186,0,1.5089759505299,0.189106080167819,1.23165786914764,1.09597866213787,0.278047249225598,1.0447564995665,1.02891068203972,0.59710280045548,1.40442637462647,3.3455227924913,4.26245249093389,1.03562886267751,1.40715635988658,1.80062061461015,1.18372367792605,0.787056926989615,1.3884040159864,1.16266972375204,1.3413670069981,0.934122738937356,0.658239399653922,1.14917224855367,0.0810688095458557,0.292399974850665,0.658650345873152,0.402619256281115,0,0.308713837137853,0,0.528901133327089,0.853153002140936,1.16118335930219,0.77320476793256,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.658795818896044,1.50801125280162,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0,2.27601481143698,0.913988100877831,2.25415471346161,0.610953983535943,0.193952487167626,0.771494018793504,0.316182685621286,0.295220295959204,0,0.246794327843601,0,10.8449318715461,11.0073037263394,13.4917267430912,14.8087888613607,12.7823894668781,7.89340140522401,5.4662266115654,6.80967952455149,3.29473695825698,4.31304619582064,4.83783231969054,0.624075346229121,0.757736633841335,0,0.482443521363367,1.10851914099963,2.08440552947533,0.977789858652155,1.18821560042632,1.17345124144251,1.34005005953453,0.952174563544055,0.585400943573396,1.10344600874334,0.44292937929755,0.956728611944923,1.1470432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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=322 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:26472857..26472901,+ | |||
|description=CAGE_peak_at_chr7:26472857..26472901,+ | |||
|id=chr7:26472857..26472901,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.57e-09!32;CL:0002032!6.57e-09!32;CL:0000037!6.57e-09!32;CL:0000566!6.57e-09!32;CL:0000837!6.57e-09!32;CL:0000049!7.48e-09!19;CL:0000763!4.52e-08!16;CL:0002320!1.66e-07!46;CL:0000134!1.66e-07!46;CL:0002031!2.20e-07!25;CL:0000839!3.03e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.32e-10,19;CL:0000763,2.03e-09,16;CL:0000988,1.68e-08,32;CL:0002032,1.68e-08,32;CL:0000037,1.68e-08,32;CL:0000837,1.68e-08,32;CL:0000839,2.01e-08,13;CL:0002320,2.57e-08,46;CL:0000134,2.57e-08,46;CL:0002031,4.66e-07,25;CL:0000050,7.65e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.12e-14!45;UBERON:0003061!2.12e-14!45;UBERON:0002193!6.17e-14!48;UBERON:0002405!1.87e-13!70;UBERON:0003081!6.54e-13!88;UBERON:0000926!3.44e-10!193;UBERON:0004120!3.44e-10!193;UBERON:0006603!3.44e-10!193;UBERON:0001474!7.02e-08!22;UBERON:0004765!7.02e-08!22;UBERON:0001434!7.02e-08!22;UBERON:0002371!7.18e-08!16;UBERON:0004177!8.97e-08!29;UBERON:0005057!1.64e-07!51;UBERON:0002384!1.66e-07!46;UBERON:0002204!2.28e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.74e-18,45;UBERON:0003061,4.74e-18,45;UBERON:0002193,7.32e-17,48;UBERON:0002405,7.32e-17,48;UBERON:0003081,5.65e-14,87;UBERON:0000926,2.17e-10,120;UBERON:0004120,2.17e-10,120;UBERON:0006603,2.17e-10,120;UBERON:0004177,6.40e-10,29;UBERON:0005057,6.40e-10,29;UBERON:0001474,9.76e-10,22;UBERON:0004765,9.76e-10,22;UBERON:0001434,9.76e-10,22;UBERON:0002371,3.54e-09,16;UBERON:0000077,1.12e-08,35;UBERON:0002384,2.57e-08,46;UBERON:0002204,2.68e-08,32;UBERON:0000072,5.56e-07,27 | |||
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| |||
|short_description=p@chr7:26472857..26472901,+ | |||
}} |
Latest revision as of 20:45, 4 August 2015
Short description: | p@chr7:26472857..26472901, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:26472857..26472901, + |
Coexpression cluster: | MCL_coexpression_mm9:322 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.32e-10 | 19 |
myeloid cell | 2.03e-09 | 16 |
hematopoietic cell | 1.68e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.68e-08 | 32 |
hematopoietic stem cell | 1.68e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.68e-08 | 32 |
myeloid lineage restricted progenitor cell | 2.01e-08 | 13 |
connective tissue cell | 2.57e-08 | 46 |
mesenchymal cell | 2.57e-08 | 46 |
hematopoietic lineage restricted progenitor cell | 4.66e-07 | 25 |
megakaryocyte-erythroid progenitor cell | 7.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.74e-18 | 45 |
blood island | 4.74e-18 | 45 |
hemolymphoid system | 7.32e-17 | 48 |
immune system | 7.32e-17 | 48 |
lateral plate mesoderm | 5.65e-14 | 87 |
mesoderm | 2.17e-10 | 120 |
mesoderm-derived structure | 2.17e-10 | 120 |
presumptive mesoderm | 2.17e-10 | 120 |
hemopoietic organ | 6.40e-10 | 29 |
immune organ | 6.40e-10 | 29 |
bone element | 9.76e-10 | 22 |
skeletal element | 9.76e-10 | 22 |
skeletal system | 9.76e-10 | 22 |
bone marrow | 3.54e-09 | 16 |
mixed endoderm/mesoderm-derived structure | 1.12e-08 | 35 |
connective tissue | 2.57e-08 | 46 |
musculoskeletal system | 2.68e-08 | 32 |
segment of respiratory tract | 5.56e-07 | 27 |