FFCP PHASE1:Mm9::chr12:45369982..45369994,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:45369982..45369994,-|id=chr12:45369982..45369994,-|ontology_enrichment_celltype=CL:0000063!3.62e-10!66;CL:0000838!1.89e-07!12;CL:0000542!9.63e-07!13;CL:0000051!9.63e-07!13|ontology_enrichment_celltype_v019_2=CL:0000838,6.59e-14,12;CL:0000624,1.22e-13,8;CL:0000542,7.69e-13,13;CL:0000051,7.69e-13,13;CL:0000791,3.71e-12,9;CL:0000789,3.71e-12,9;CL:0002420,3.71e-12,9;CL:0002419,3.71e-12,9;CL:0000790,3.71e-12,9;CL:0000084,5.36e-10,11;CL:0000827,5.36e-10,11;CL:0000738,8.08e-10,17;CL:0002087,8.08e-10,17;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000945,5.62e-08,1;CL:0000236,5.62e-08,1;CL:0000826,5.62e-08,1;CL:0000213,1.05e-07,1;CL:0002078,1.05e-07,1;CL:0000115,1.05e-07,1;CL:0002262,1.05e-07,1;CL:1000398,1.05e-07,1;CL:0000355,1.38e-07,9;CL:0000988,3.29e-07,32;CL:0002032,3.29e-07,32;CL:0000037,3.29e-07,32;CL:0000837,3.29e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.30e-21,3;DOID:4045,1.30e-21,3;DOID:0050686,4.04e-11,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.05e-07,1;UBERON:0001281,1.05e-07,1;UBERON:0000353,1.05e-07,1;UBERON:0003497,1.05e-07,1;UBERON:0003909,1.05e-07,1;UBERON:0003928,1.05e-07,1;UBERON:0003835,1.05e-07,1;UBERON:0003513,1.05e-07,1;UBERON:0001280,1.05e-07,1;UBERON:0004647,1.05e-07,1;UBERON:0002294,1.05e-07,1;UBERON:0001173,1.05e-07,1;UBERON:0004912,1.05e-07,1;UBERON:0005171,1.05e-07,1;UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,3.22808308603941,0,0,0.171217968225505,0,2.05440875917447,1.48614684112296,0,0.202475267389826,0,0,0,0.42438965179803,0,0.0992909512008853,0.522399578277871,0,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,9.62622750694888,7.0320181007142,6.80580867165938,28.8233429135197,12.294818729252,6.311634589405,0,0.202753862439029,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.381210681219194,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,0.339956859987711,0.69975726161829,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr12:45369982..45369994,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:45369982..45369994,- | |||
|description=CAGE_peak_at_chr12:45369982..45369994,- | |||
|id=chr12:45369982..45369994,- | |||
|ontology_enrichment_celltype=CL:0000063!3.62e-10!66;CL:0000838!1.89e-07!12;CL:0000542!9.63e-07!13;CL:0000051!9.63e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.59e-14,12;CL:0000624,1.22e-13,8;CL:0000542,7.69e-13,13;CL:0000051,7.69e-13,13;CL:0000791,3.71e-12,9;CL:0000789,3.71e-12,9;CL:0002420,3.71e-12,9;CL:0002419,3.71e-12,9;CL:0000790,3.71e-12,9;CL:0000084,5.36e-10,11;CL:0000827,5.36e-10,11;CL:0000738,8.08e-10,17;CL:0002087,8.08e-10,17;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000945,5.62e-08,1;CL:0000236,5.62e-08,1;CL:0000826,5.62e-08,1;CL:0000213,1.05e-07,1;CL:0002078,1.05e-07,1;CL:0000115,1.05e-07,1;CL:0002262,1.05e-07,1;CL:1000398,1.05e-07,1;CL:0000355,1.38e-07,9;CL:0000988,3.29e-07,32;CL:0002032,3.29e-07,32;CL:0000037,3.29e-07,32;CL:0000837,3.29e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.30e-21,3;DOID:4045,1.30e-21,3;DOID:0050686,4.04e-11,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.05e-07,1;UBERON:0001281,1.05e-07,1;UBERON:0000353,1.05e-07,1;UBERON:0003497,1.05e-07,1;UBERON:0003909,1.05e-07,1;UBERON:0003928,1.05e-07,1;UBERON:0003835,1.05e-07,1;UBERON:0003513,1.05e-07,1;UBERON:0001280,1.05e-07,1;UBERON:0004647,1.05e-07,1;UBERON:0002294,1.05e-07,1;UBERON:0001173,1.05e-07,1;UBERON:0004912,1.05e-07,1;UBERON:0005171,1.05e-07,1;UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,3.22808308603941,0,0,0.171217968225505,0,2.05440875917447,1.48614684112296,0,0.202475267389826,0,0,0,0.42438965179803,0,0.0992909512008853,0.522399578277871,0,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,9.62622750694888,7.0320181007142,6.80580867165938,28.8233429135197,12.294818729252,6.311634589405,0,0.202753862439029,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.381210681219194,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,0.339956859987711,0.69975726161829,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr12:45369982..45369994,- | |||
}} |
Latest revision as of 01:27, 5 August 2015
Short description: | p@chr12:45369982..45369994, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:45369982..45369994, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.59e-14 | 12 |
CD4-positive, alpha-beta T cell | 1.22e-13 | 8 |
lymphocyte | 7.69e-13 | 13 |
common lymphoid progenitor | 7.69e-13 | 13 |
mature alpha-beta T cell | 3.71e-12 | 9 |
alpha-beta T cell | 3.71e-12 | 9 |
immature T cell | 3.71e-12 | 9 |
mature T cell | 3.71e-12 | 9 |
immature alpha-beta T cell | 3.71e-12 | 9 |
T cell | 5.36e-10 | 11 |
pro-T cell | 5.36e-10 | 11 |
leukocyte | 8.08e-10 | 17 |
nongranular leukocyte | 8.08e-10 | 17 |
regulatory T cell | 4.10e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.10e-08 | 1 |
lymphocyte of B lineage | 5.62e-08 | 1 |
B cell | 5.62e-08 | 1 |
pro-B cell | 5.62e-08 | 1 |
lining cell | 1.05e-07 | 1 |
meso-epithelial cell | 1.05e-07 | 1 |
endothelial cell | 1.05e-07 | 1 |
endothelial cell of sinusoid | 1.05e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.05e-07 | 1 |
multi-potent skeletal muscle stem cell | 1.38e-07 | 9 |
hematopoietic cell | 3.29e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.29e-07 | 32 |
hematopoietic stem cell | 3.29e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.29e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.05e-07 | 1 |
hepatic sinusoid | 1.05e-07 | 1 |
parenchyma | 1.05e-07 | 1 |
abdomen blood vessel | 1.05e-07 | 1 |
sinusoid | 1.05e-07 | 1 |
digestive system duct | 1.05e-07 | 1 |
abdominal segment blood vessel | 1.05e-07 | 1 |
trunk blood vessel | 1.05e-07 | 1 |
liver parenchyma | 1.05e-07 | 1 |
liver lobule | 1.05e-07 | 1 |
biliary system | 1.05e-07 | 1 |
biliary tree | 1.05e-07 | 1 |
biliary bud | 1.05e-07 | 1 |
hepatic duct | 1.05e-07 | 1 |
skeletal muscle tissue | 1.38e-07 | 9 |
striated muscle tissue | 1.38e-07 | 9 |
muscle tissue | 1.38e-07 | 9 |
multilaminar epithelium | 1.38e-07 | 9 |
epithelial vesicle | 1.38e-07 | 9 |
musculature | 1.38e-07 | 9 |
somite | 1.38e-07 | 9 |
myotome | 1.38e-07 | 9 |
presomitic mesoderm | 1.38e-07 | 9 |
presumptive segmental plate | 1.38e-07 | 9 |
dermomyotome | 1.38e-07 | 9 |
trunk paraxial mesoderm | 1.38e-07 | 9 |
musculature of body | 7.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.30e-21 | 3 |
muscle cancer | 1.30e-21 | 3 |
organ system cancer | 4.04e-11 | 6 |