FFCP PHASE1:Mm9::chr12:56937304..56937317,+: Difference between revisions
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{{FFCP|EntrezGene=52592|HGNC=|UniProt=Q3U1T3|association_with_transcript=-35bp_to_ENSMUST00000012220,ENSMUST00000059250,NM_001037756,uc007noz.1,uc007npa.1_5end|description=CAGE_peak_3_at_Brms1l_5end|id=chr12:56937304..56937317,+|ontology_enrichment_celltype=CL:0000117!1.14e-09!23;CL:0000337!1.14e-09!23;CL:0000540!4.39e-07!33;CL:0000047!4.39e-07!33;CL:0000031!4.39e-07!33;CL:0000404!4.39e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.29e-11,23;CL:0000337,4.29e-11,23;CL:0000540,3.30e-07,33;CL:0000047,3.30e-07,33;CL:0000031,3.30e-07,33;CL:0000404,3.30e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.65e-14!71;UBERON:0003075!9.65e-14!71;UBERON:0007284!9.65e-14!71;UBERON:0002020!1.15e-13!34;UBERON:0001049!1.46e-13!52;UBERON:0005068!1.46e-13!52;UBERON:0006241!1.46e-13!52;UBERON:0007135!1.46e-13!52;UBERON:0000955!3.68e-13!50;UBERON:0006238!3.68e-13!50;UBERON:0001017!5.04e-13!73;UBERON:0005743!5.04e-13!73;UBERON:0002616!1.26e-12!49;UBERON:0000073!1.39e-12!75;UBERON:0001016!1.39e-12!75;UBERON:0002791!6.26e-12!29;UBERON:0003528!6.26e-12!29;UBERON:0001893!6.26e-12!29;UBERON:0003080!2.45e-11!40;UBERON:0003056!2.94e-11!49;UBERON:0000033!6.21e-11!63;UBERON:0002780!7.45e-11!39;UBERON:0001890!7.45e-11!39;UBERON:0006240!7.45e-11!39;UBERON:0004121!4.75e-10!102;UBERON:0000924!4.75e-10!102;UBERON:0006601!4.75e-10!102;UBERON:0000956!6.09e-09!21;UBERON:0001869!6.09e-09!21;UBERON:0000203!6.09e-09!21;UBERON:0000025!3.89e-07!114;UBERON:0002619!8.23e-07!17;UBERON:0002021!9.16e-07!10;UBERON:0000411!9.16e-07!10;UBERON:0001950!9.16e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.91e-17,54;UBERON:0002020,1.84e-16,34;UBERON:0001049,3.10e-16,52;UBERON:0005068,3.10e-16,52;UBERON:0006241,3.10e-16,52;UBERON:0007135,3.10e-16,52;UBERON:0001017,3.63e-15,73;UBERON:0002346,1.67e-14,64;UBERON:0003075,1.67e-14,64;UBERON:0007284,1.67e-14,64;UBERON:0003528,2.03e-14,29;UBERON:0002791,2.03e-14,29;UBERON:0001893,2.03e-14,29;UBERON:0001016,3.86e-14,75;UBERON:0000955,4.62e-14,47;UBERON:0006238,4.62e-14,47;UBERON:0010314,8.85e-14,92;UBERON:0002616,1.91e-13,46;UBERON:0003080,6.36e-13,40;UBERON:0002780,2.34e-12,39;UBERON:0001890,2.34e-12,39;UBERON:0006240,2.34e-12,39;UBERON:0003056,3.50e-12,49;UBERON:0000956,6.70e-11,21;UBERON:0001869,6.70e-11,21;UBERON:0000203,6.70e-11,21;UBERON:0010371,3.21e-10,73;UBERON:0004121,9.42e-10,95;UBERON:0000924,9.42e-10,95;UBERON:0006601,9.42e-10,95;UBERON:0002619,2.31e-08,17;UBERON:0000025,3.00e-08,114;UBERON:0002021,1.11e-07,10;UBERON:0000411,1.11e-07,10;UBERON:0001950,1.11e-07,10;UBERON:0004111,8.24e-07,122|phase1_expression=0.320297694209588,0.697950815278722,0.909998478779072,1.51232105653415,0.500895729946347,0.671517087647559,0,0.258246646883153,0.140788722151667,0.468129052643987,0.34243593645101,0.638177271962691,1.36960583944965,0.437102012094987,1.99865857089398,1.61980213911861,2.79824751251259,0.315462165358238,0.548457734422955,0.84877930359606,1.44573593256819,0.297872853602656,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0.861884930743556,0.570070258369122,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,1.02084678131185,0.418531630736908,0,0,0,0,0.485510353031154,0.881277725829041,0.811015449756117,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,2.87505128729943,1.8456086666351,1.45072428402269,0.672187598284928,0.771778308107841,0.85960031981627,1.03134418455488,1.21389876515759,1.5869729378161,3.80298842103708,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,2.17748185847803,3.24014251996058,2.94454945891935,1.71390590642282,2.42955395046775,1.95985278743926,2.01275489138296,1.83843757322004,2.20231761998777,2.042997409363,2.91852413186863,2.2420668914133,1.18933936683133,3.12548022334056,3.35019598801657,1.12552522006336,2.29197371665215,2.06240009831567,1.42371680799103,1.86399445825301,0.908714319998209,0.755715601067855,0,0,0,0,0.649776417447669,0.896053774194671,0.983110940922263,1.70430322578058,1.81850203222008,1.41335829804136,0.985903938436763,0,7.64415719119937,0,0.865964164044856,0,0.505524445014783,0.22836775943812,0.517875767294343,1.48442139064825,1.73485326766136,2.74018930480927,0.461230994512117,1.20578112442098,1.64624189989987,1.0053327306374,0.247194967734374,1.3013942122792,0,0.485300549842228,0.220841518460394,0.484875253135222,1.86391761218122,2.04946557908083,1.25668024088073,0.255457055208591,0,0.599902730993408,0.254140454146129,2.39665023047716,3.66000482254901,2.26177833803156,3.12883776346098,4.60287823194595,4.1557608911912,2.59586020908412,0.407357455401265,0.248813941220186,0.505445516867349,1.05220927943237,0.910843100738926,0.459804208866946,0.900310649026746,1.80845781402858,1.42876648217788,1.66547836370305,1.3118241438362,1.55222022443409,1.07783996466421,1.51284864134255,1.23165786914764,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0.995171334092466,0,0,0.284163499395593,1.03562886267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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52592 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U1T3 | |||
|association_with_transcript=-35bp_to_ENSMUST00000012220,ENSMUST00000059250,NM_001037756,uc007noz.1,uc007npa.1_5end | |||
|cluster_id=chr12:56937304..56937317,+ | |||
|description=CAGE_peak_3_at_Brms1l_5end | |||
|id=chr12:56937304..56937317,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.14e-09!23;CL:0000337!1.14e-09!23;CL:0000540!4.39e-07!33;CL:0000047!4.39e-07!33;CL:0000031!4.39e-07!33;CL:0000404!4.39e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.29e-11,23;CL:0000337,4.29e-11,23;CL:0000540,3.30e-07,33;CL:0000047,3.30e-07,33;CL:0000031,3.30e-07,33;CL:0000404,3.30e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.65e-14!71;UBERON:0003075!9.65e-14!71;UBERON:0007284!9.65e-14!71;UBERON:0002020!1.15e-13!34;UBERON:0001049!1.46e-13!52;UBERON:0005068!1.46e-13!52;UBERON:0006241!1.46e-13!52;UBERON:0007135!1.46e-13!52;UBERON:0000955!3.68e-13!50;UBERON:0006238!3.68e-13!50;UBERON:0001017!5.04e-13!73;UBERON:0005743!5.04e-13!73;UBERON:0002616!1.26e-12!49;UBERON:0000073!1.39e-12!75;UBERON:0001016!1.39e-12!75;UBERON:0002791!6.26e-12!29;UBERON:0003528!6.26e-12!29;UBERON:0001893!6.26e-12!29;UBERON:0003080!2.45e-11!40;UBERON:0003056!2.94e-11!49;UBERON:0000033!6.21e-11!63;UBERON:0002780!7.45e-11!39;UBERON:0001890!7.45e-11!39;UBERON:0006240!7.45e-11!39;UBERON:0004121!4.75e-10!102;UBERON:0000924!4.75e-10!102;UBERON:0006601!4.75e-10!102;UBERON:0000956!6.09e-09!21;UBERON:0001869!6.09e-09!21;UBERON:0000203!6.09e-09!21;UBERON:0000025!3.89e-07!114;UBERON:0002619!8.23e-07!17;UBERON:0002021!9.16e-07!10;UBERON:0000411!9.16e-07!10;UBERON:0001950!9.16e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.91e-17,54;UBERON:0002020,1.84e-16,34;UBERON:0001049,3.10e-16,52;UBERON:0005068,3.10e-16,52;UBERON:0006241,3.10e-16,52;UBERON:0007135,3.10e-16,52;UBERON:0001017,3.63e-15,73;UBERON:0002346,1.67e-14,64;UBERON:0003075,1.67e-14,64;UBERON:0007284,1.67e-14,64;UBERON:0003528,2.03e-14,29;UBERON:0002791,2.03e-14,29;UBERON:0001893,2.03e-14,29;UBERON:0001016,3.86e-14,75;UBERON:0000955,4.62e-14,47;UBERON:0006238,4.62e-14,47;UBERON:0010314,8.85e-14,92;UBERON:0002616,1.91e-13,46;UBERON:0003080,6.36e-13,40;UBERON:0002780,2.34e-12,39;UBERON:0001890,2.34e-12,39;UBERON:0006240,2.34e-12,39;UBERON:0003056,3.50e-12,49;UBERON:0000956,6.70e-11,21;UBERON:0001869,6.70e-11,21;UBERON:0000203,6.70e-11,21;UBERON:0010371,3.21e-10,73;UBERON:0004121,9.42e-10,95;UBERON:0000924,9.42e-10,95;UBERON:0006601,9.42e-10,95;UBERON:0002619,2.31e-08,17;UBERON:0000025,3.00e-08,114;UBERON:0002021,1.11e-07,10;UBERON:0000411,1.11e-07,10;UBERON:0001950,1.11e-07,10;UBERON:0004111,8.24e-07,122 | |||
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| |||
|short_description=p3@Brms1l | |||
}} |
Revision as of 03:02, 5 August 2015
Short description: | p3@Brms1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Brms1l_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENSMUST00000012220, ENSMUST00000059250, NM_001037756, uc007noz.1, uc007npa.1_5end |
EntrezGene: | 52592 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.29e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.29e-11 | 23 |
neuron | 3.30e-07 | 33 |
neuronal stem cell | 3.30e-07 | 33 |
neuroblast | 3.30e-07 | 33 |
electrically signaling cell | 3.30e-07 | 33 |