FFCP PHASE1:Mm9::chr7:36340444..36340532,-: Difference between revisions
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{{FFCP|EntrezGene=110959|HGNC=|MCL_coexpression_id=405|UniProt=|association_with_transcript=-231bp_to_ENSMUST00000142930_5end|description=CAGE_peak_2_at_Nudt19_5end|id=chr7:36340444..36340532,-|ontology_enrichment_celltype=CL:0000117!5.53e-09!23;CL:0000337!5.53e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.53e-09,23;CL:0000337,5.53e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.50e-17!34;UBERON:0002791!2.59e-14!29;UBERON:0003528!2.59e-14!29;UBERON:0001893!2.59e-14!29;UBERON:0001049!1.21e-13!52;UBERON:0005068!1.21e-13!52;UBERON:0006241!1.21e-13!52;UBERON:0007135!1.21e-13!52;UBERON:0001017!5.41e-13!73;UBERON:0005743!5.41e-13!73;UBERON:0000955!1.14e-12!50;UBERON:0006238!1.14e-12!50;UBERON:0000073!1.33e-12!75;UBERON:0001016!1.33e-12!75;UBERON:0002616!4.34e-12!49;UBERON:0000956!4.39e-12!21;UBERON:0001869!4.39e-12!21;UBERON:0000203!4.39e-12!21;UBERON:0002619!5.68e-10!17;UBERON:0007811!2.33e-09!86;UBERON:0003080!5.39e-09!40;UBERON:0002780!1.43e-08!39;UBERON:0001890!1.43e-08!39;UBERON:0006240!1.43e-08!39;UBERON:0000033!2.17e-08!63;UBERON:0002021!5.32e-08!10;UBERON:0000411!5.32e-08!10;UBERON:0001950!5.32e-08!10;UBERON:0000477!7.06e-08!154;UBERON:0003103!1.67e-07!43;UBERON:0002346!3.79e-07!71;UBERON:0003075!3.79e-07!71;UBERON:0007284!3.79e-07!71;UBERON:0000153!6.64e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.50e-17,34;UBERON:0000073,2.10e-14,54;UBERON:0003528,2.59e-14,29;UBERON:0002791,2.59e-14,29;UBERON:0001893,2.59e-14,29;UBERON:0001049,1.21e-13,52;UBERON:0005068,1.21e-13,52;UBERON:0006241,1.21e-13,52;UBERON:0007135,1.21e-13,52;UBERON:0001017,5.41e-13,73;UBERON:0001016,1.33e-12,75;UBERON:0000956,4.39e-12,21;UBERON:0001869,4.39e-12,21;UBERON:0000203,4.39e-12,21;UBERON:0010314,6.08e-12,92;UBERON:0000955,1.83e-11,47;UBERON:0006238,1.83e-11,47;UBERON:0002616,6.74e-11,46;UBERON:0002619,5.68e-10,17;UBERON:0002346,1.06e-09,64;UBERON:0003075,1.06e-09,64;UBERON:0007284,1.06e-09,64;UBERON:0003080,5.39e-09,40;UBERON:0002780,1.43e-08,39;UBERON:0001890,1.43e-08,39;UBERON:0006240,1.43e-08,39;UBERON:0002021,5.32e-08,10;UBERON:0000411,5.32e-08,10;UBERON:0001950,5.32e-08,10;UBERON:0003103,1.67e-07,43;UBERON:0004121,2.53e-07,95;UBERON:0000924,2.53e-07,95;UBERON:0006601,2.53e-07,95;UBERON:0010371,5.30e-07,73|phase1_expression=5.60520964866779,1.74487703819681,5.45999087267443,0.60492842261366,2.00358291978539,6.88305014838748,8.41005506143892,12.3958390503913,4.50523910885334,4.68129052643987,22.9432077422177,28.7977493973164,9.75844160607873,13.3753215701066,23.3176833270964,11.9460407759997,16.7894850750755,16.0885704332701,15.3568165638427,15.2780274647291,13.0116233931137,7.04965753526286,10.9703911438353,8.47959840805055,9.40578052375397,2.8711598205751,6.8921919385452,7.11055067863434,8.55105387553682,6.30075324399827,6.20845429834853,7.62036808151557,14.7615549020297,15.8481681015439,14.1537293678125,17.6208724080002,13.6793468695787,3.76678467663217,3.906676722619,3.14114246384279,1.17646297606203,0.683045484958446,3.39857247121808,7.42791226055906,8.31290836000019,10.4621648732158,14.0830441982647,22.2385659508055,12.9614847813338,11.2769341463084,13.4386964760348,17.2503077237966,7.88578248471361,6.5282592781021,11.4271891708438,5.14518872071894,8.30946975822394,11.8604581223812,12.3413041124355,17.9856932952491,15.8457850876545,7.79342423759004,8.89294796111139,21.1476433561129,17.7995945262055,19.1829631035447,22.1704081783619,23.4373166246148,27.788816098672,29.5663004946403,28.3938697824366,52.5597811302999,33.3511496836936,27.1929574257198,24.6322860516867,27.5765635983006,25.3266526298594,23.111408193419,23.962619187974,12.1335384711778,14.729510619988,13.5437476344758,31.8268618861574,16.3201156909187,23.0725354142983,22.3917724959987,31.6065131374009,16.7759501242771,9.46577416664801,8.91744409260069,6.66688324013859,8.60423876981386,5.439770669662,3.77792234146472,7.79731700937203,8.06448396775204,16.7128859956785,12.1005529030421,10.1316541795119,13.7802434059033,9.85903938436764,1.28326477414318,7.64415719119937,14.2213340630666,7.79367747640371,6.58735650235256,8.59391556525132,9.1347103775248,12.1700805314171,9.94562331734326,8.84775166507293,1.21786191324856,4.61230994512117,6.78251882486802,5.05631440683531,9.42499434972566,0.988779870937496,13.5923395504717,17.6922110389975,10.0295446967394,12.1462835153216,10.6672555689749,11.1835056730873,17.2740670236813,19.0596503200244,8.68553987709211,19.2902350454532,26.3957201637099,18.5522531526674,27.7112682898922,32.4825428001225,49.13085167613,47.9755123730683,34.010155824934,31.168206683934,34.2329065072969,7.73979165262404,8.58408097209642,18.9542068825256,10.5220927943237,7.67710613479952,6.89706313300419,7.56260945182467,5.87748789559289,7.75616090325138,8.32739181851524,9.18276900685342,9.57202471734358,4.095791865724,5.29497024469894,5.27853372491847,8.32943783224784,5.56094498451196,5.2237824978325,9.4659782747654,6.96619933864726,26.6841011179029,21.3598762905214,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110959 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-231bp_to_ENSMUST00000142930_5end | |||
|cluster_id=chr7:36340444..36340532,- | |||
|description=CAGE_peak_2_at_Nudt19_5end | |||
|id=chr7:36340444..36340532,- | |||
|ontology_enrichment_celltype=CL:0000117!5.53e-09!23;CL:0000337!5.53e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.53e-09,23;CL:0000337,5.53e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.50e-17!34;UBERON:0002791!2.59e-14!29;UBERON:0003528!2.59e-14!29;UBERON:0001893!2.59e-14!29;UBERON:0001049!1.21e-13!52;UBERON:0005068!1.21e-13!52;UBERON:0006241!1.21e-13!52;UBERON:0007135!1.21e-13!52;UBERON:0001017!5.41e-13!73;UBERON:0005743!5.41e-13!73;UBERON:0000955!1.14e-12!50;UBERON:0006238!1.14e-12!50;UBERON:0000073!1.33e-12!75;UBERON:0001016!1.33e-12!75;UBERON:0002616!4.34e-12!49;UBERON:0000956!4.39e-12!21;UBERON:0001869!4.39e-12!21;UBERON:0000203!4.39e-12!21;UBERON:0002619!5.68e-10!17;UBERON:0007811!2.33e-09!86;UBERON:0003080!5.39e-09!40;UBERON:0002780!1.43e-08!39;UBERON:0001890!1.43e-08!39;UBERON:0006240!1.43e-08!39;UBERON:0000033!2.17e-08!63;UBERON:0002021!5.32e-08!10;UBERON:0000411!5.32e-08!10;UBERON:0001950!5.32e-08!10;UBERON:0000477!7.06e-08!154;UBERON:0003103!1.67e-07!43;UBERON:0002346!3.79e-07!71;UBERON:0003075!3.79e-07!71;UBERON:0007284!3.79e-07!71;UBERON:0000153!6.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.50e-17,34;UBERON:0000073,2.10e-14,54;UBERON:0003528,2.59e-14,29;UBERON:0002791,2.59e-14,29;UBERON:0001893,2.59e-14,29;UBERON:0001049,1.21e-13,52;UBERON:0005068,1.21e-13,52;UBERON:0006241,1.21e-13,52;UBERON:0007135,1.21e-13,52;UBERON:0001017,5.41e-13,73;UBERON:0001016,1.33e-12,75;UBERON:0000956,4.39e-12,21;UBERON:0001869,4.39e-12,21;UBERON:0000203,4.39e-12,21;UBERON:0010314,6.08e-12,92;UBERON:0000955,1.83e-11,47;UBERON:0006238,1.83e-11,47;UBERON:0002616,6.74e-11,46;UBERON:0002619,5.68e-10,17;UBERON:0002346,1.06e-09,64;UBERON:0003075,1.06e-09,64;UBERON:0007284,1.06e-09,64;UBERON:0003080,5.39e-09,40;UBERON:0002780,1.43e-08,39;UBERON:0001890,1.43e-08,39;UBERON:0006240,1.43e-08,39;UBERON:0002021,5.32e-08,10;UBERON:0000411,5.32e-08,10;UBERON:0001950,5.32e-08,10;UBERON:0003103,1.67e-07,43;UBERON:0004121,2.53e-07,95;UBERON:0000924,2.53e-07,95;UBERON:0006601,2.53e-07,95;UBERON:0010371,5.30e-07,73 | |||
|phase1_expression=5.60520964866779,1.74487703819681,5.45999087267443,0.60492842261366,2.00358291978539,6.88305014838748,8.41005506143892,12.3958390503913,4.50523910885334,4.68129052643987,22.9432077422177,28.7977493973164,9.75844160607873,13.3753215701066,23.3176833270964,11.9460407759997,16.7894850750755,16.0885704332701,15.3568165638427,15.2780274647291,13.0116233931137,7.04965753526286,10.9703911438353,8.47959840805055,9.40578052375397,2.8711598205751,6.8921919385452,7.11055067863434,8.55105387553682,6.30075324399827,6.20845429834853,7.62036808151557,14.7615549020297,15.8481681015439,14.1537293678125,17.6208724080002,13.6793468695787,3.76678467663217,3.906676722619,3.14114246384279,1.17646297606203,0.683045484958446,3.39857247121808,7.42791226055906,8.31290836000019,10.4621648732158,14.0830441982647,22.2385659508055,12.9614847813338,11.2769341463084,13.4386964760348,17.2503077237966,7.88578248471361,6.5282592781021,11.4271891708438,5.14518872071894,8.30946975822394,11.8604581223812,12.3413041124355,17.9856932952491,15.8457850876545,7.79342423759004,8.89294796111139,21.1476433561129,17.7995945262055,19.1829631035447,22.1704081783619,23.4373166246148,27.788816098672,29.5663004946403,28.3938697824366,52.5597811302999,33.3511496836936,27.1929574257198,24.6322860516867,27.5765635983006,25.3266526298594,23.111408193419,23.962619187974,12.1335384711778,14.729510619988,13.5437476344758,31.8268618861574,16.3201156909187,23.0725354142983,22.3917724959987,31.6065131374009,16.7759501242771,9.46577416664801,8.91744409260069,6.66688324013859,8.60423876981386,5.439770669662,3.77792234146472,7.79731700937203,8.06448396775204,16.7128859956785,12.1005529030421,10.1316541795119,13.7802434059033,9.85903938436764,1.28326477414318,7.64415719119937,14.2213340630666,7.79367747640371,6.58735650235256,8.59391556525132,9.1347103775248,12.1700805314171,9.94562331734326,8.84775166507293,1.21786191324856,4.61230994512117,6.78251882486802,5.05631440683531,9.42499434972566,0.988779870937496,13.5923395504717,17.6922110389975,10.0295446967394,12.1462835153216,10.6672555689749,11.1835056730873,17.2740670236813,19.0596503200244,8.68553987709211,19.2902350454532,26.3957201637099,18.5522531526674,27.7112682898922,32.4825428001225,49.13085167613,47.9755123730683,34.010155824934,31.168206683934,34.2329065072969,7.73979165262404,8.58408097209642,18.9542068825256,10.5220927943237,7.67710613479952,6.89706313300419,7.56260945182467,5.87748789559289,7.75616090325138,8.32739181851524,9.18276900685342,9.57202471734358,4.095791865724,5.29497024469894,5.27853372491847,8.32943783224784,5.56094498451196,5.2237824978325,9.4659782747654,6.96619933864726,26.6841011179029,21.3598762905214,26.9955324425813,21.5410803436922,16.6513502586578,17.4660199617184,24.1479630296914,27.3502282128891,32.5503608192368,31.8571504308059,36.4851825903482,31.9937038086044,40.1526033788892,30.6993157827908,32.4275238183423,39.6201965922651,41.2754216747175,31.1358891524062,39.3242203814918,39.2066573165074,3.30418782983798,10.5780226665418,7.46508876873319,9.0572302025571,10.0516619831233,9.07575860805041,10.6741461045538,8.56015317506516,9.49058123089023,9.22314146454461,3.01602250560323,7.56034593756373,5.65395852645448,6.29173586057955,7.3486936957396,6.17337947088538,14.2250925714811,8.91138398355885,9.01661885384643,9.77526373657508,10.2794818198842,13.2556699592702,15.0502958355732,23.4700135287567,23.0788129926821,25.4198157678909,6.22550516883013,17.5187361001899,14.3488066432638,15.9652099793246,11.9687471619217,11.8176808278684,6.87489799809833,8.63088412352432,13.781494275878,10.7078951143352,1.43768206527355,7.07067800570156,5.30464044294753,8.08252409430758,8.61107584905178,13.9908621195376,7.7596339869974,8.7166049414423,10.4297584922897,5.26209765903083,4.45911471748154,4.85768146581266,2.85652369063216,3.51240566144038,5.51723004371669,4.4292937929755,7.49437412690189,6.39066927391378,6.90739927463582,5.49666422609744,7.53956419696361,26.6513785071168,4.91764273019036,3.58717770196152,29.3807579677659,25.9037827368769,7.37707254195039,21.9649706667804,12.6203287766503,9.76096860741596,8.61693590931196,7.40803273652911,8.24355094104858,7.64306633129848,6.47697122679831,7.89090816360542,7.90575555893047,43.378377716944,8.23252494207958,7.83488656135923,6.8412522928502,7.75359577970917,9.2921596837974,13.110154352369,12.09294227859,9.8074641473067,10.9261700365886,13.8345816574767,9.8202751403924,15.6319503675327,11.0514187299264,8.21695570633122,4.21674434299995,10.3135543248187,8.17055053809091,5.76195500900193,5.43306471887569,5.5727629108214,6.7389288784064,5.70780216326626,5.92376474167636,6.69822888052118,3.98941903708308,2.1183207086382,6.61585194164886,8.73897140589844,9.36493674836252,8.98662581429522,8.23669173621642,8.20704498725306,5.53813589596716,28.9263471136395,14.8657666294132,10.5257302661243,12.5932278611404,11.1137389632768,12.1657862671712,17.3871411636957,14.10820968949,13.0154850661002,12.0233977209849,6.68269432610579,7.59206384594725,8.9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| |||
|short_description=p2@Nudt19 | |||
}} |
Revision as of 03:25, 5 August 2015
Short description: | p2@Nudt19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nudt19_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | -231bp_to_ENSMUST00000142930_5end |
EntrezGene: | 110959 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.53e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.53e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 9.50e-17 | 34 |
regional part of nervous system | 2.10e-14 | 54 |
brain grey matter | 2.59e-14 | 29 |
regional part of telencephalon | 2.59e-14 | 29 |
telencephalon | 2.59e-14 | 29 |
neural tube | 1.21e-13 | 52 |
neural rod | 1.21e-13 | 52 |
future spinal cord | 1.21e-13 | 52 |
neural keel | 1.21e-13 | 52 |
central nervous system | 5.41e-13 | 73 |
nervous system | 1.33e-12 | 75 |
cerebral cortex | 4.39e-12 | 21 |
cerebral hemisphere | 4.39e-12 | 21 |
pallium | 4.39e-12 | 21 |
structure with developmental contribution from neural crest | 6.08e-12 | 92 |
brain | 1.83e-11 | 47 |
future brain | 1.83e-11 | 47 |
regional part of brain | 6.74e-11 | 46 |
regional part of cerebral cortex | 5.68e-10 | 17 |
neurectoderm | 1.06e-09 | 64 |
neural plate | 1.06e-09 | 64 |
presumptive neural plate | 1.06e-09 | 64 |
anterior neural tube | 5.39e-09 | 40 |
regional part of forebrain | 1.43e-08 | 39 |
forebrain | 1.43e-08 | 39 |
future forebrain | 1.43e-08 | 39 |
occipital lobe | 5.32e-08 | 10 |
visual cortex | 5.32e-08 | 10 |
neocortex | 5.32e-08 | 10 |
compound organ | 1.67e-07 | 43 |
ectoderm-derived structure | 2.53e-07 | 95 |
ectoderm | 2.53e-07 | 95 |
presumptive ectoderm | 2.53e-07 | 95 |
ecto-epithelium | 5.30e-07 | 73 |