FFCP PHASE1:Mm9::chr15:31460578..31460588,-: Difference between revisions
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{{FFCP|EntrezGene=223455|HGNC=|MCL_coexpression_id=2|UniProt=Q6ZQ89|association_with_transcript=203bp_to_ENSMUST00000090227,NM_172606,uc007vkh.1_5end|description=CAGE_peak_3_at_March6_5end|id=chr15:31460578..31460588,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!7.77e-16!50;UBERON:0006238!7.77e-16!50;UBERON:0002616!3.57e-15!49;UBERON:0001049!6.89e-15!52;UBERON:0005068!6.89e-15!52;UBERON:0006241!6.89e-15!52;UBERON:0007135!6.89e-15!52;UBERON:0000033!2.34e-14!63;UBERON:0003080!2.01e-12!40;UBERON:0002346!2.71e-12!71;UBERON:0003075!2.71e-12!71;UBERON:0007284!2.71e-12!71;UBERON:0002780!6.92e-12!39;UBERON:0001890!6.92e-12!39;UBERON:0006240!6.92e-12!39;UBERON:0003056!2.54e-11!49;UBERON:0001017!1.09e-10!73;UBERON:0005743!1.09e-10!73;UBERON:0002020!1.73e-10!34;UBERON:0002791!3.95e-10!29;UBERON:0003528!3.95e-10!29;UBERON:0001893!3.95e-10!29;UBERON:0000073!1.13e-09!75;UBERON:0001016!1.13e-09!75;UBERON:0004121!3.69e-09!102;UBERON:0000924!3.69e-09!102;UBERON:0006601!3.69e-09!102;UBERON:0007811!1.31e-08!86;UBERON:0000153!1.74e-08!94;UBERON:0002021!6.90e-08!10;UBERON:0000411!6.90e-08!10;UBERON:0001950!6.90e-08!10;UBERON:0004111!1.02e-07!122;UBERON:0000025!1.42e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.79e-19,54;UBERON:0001049,9.16e-18,52;UBERON:0005068,9.16e-18,52;UBERON:0006241,9.16e-18,52;UBERON:0007135,9.16e-18,52;UBERON:0000955,8.15e-17,47;UBERON:0006238,8.15e-17,47;UBERON:0002616,5.48e-16,46;UBERON:0010314,1.50e-15,92;UBERON:0002346,4.37e-15,64;UBERON:0003075,4.37e-15,64;UBERON:0007284,4.37e-15,64;UBERON:0003080,1.13e-14,40;UBERON:0001017,1.61e-14,73;UBERON:0002780,5.56e-14,39;UBERON:0001890,5.56e-14,39;UBERON:0006240,5.56e-14,39;UBERON:0001016,1.23e-13,75;UBERON:0002020,3.10e-13,34;UBERON:0003056,1.21e-12,49;UBERON:0003528,3.87e-12,29;UBERON:0002791,3.87e-12,29;UBERON:0001893,3.87e-12,29;UBERON:0010371,6.78e-12,73;UBERON:0004121,9.94e-12,95;UBERON:0000924,9.94e-12,95;UBERON:0006601,9.94e-12,95;UBERON:0002021,6.09e-10,10;UBERON:0000411,6.09e-10,10;UBERON:0001950,6.09e-10,10;UBERON:0004111,1.42e-08,122;UBERON:0000025,1.96e-08,114;UBERON:0002619,1.82e-07,17;UBERON:0002420,3.37e-07,8;UBERON:0007245,3.37e-07,8;UBERON:0010009,3.37e-07,8;UBERON:0010011,3.37e-07,8;UBERON:0000454,3.37e-07,8;UBERON:0000956,6.75e-07,21;UBERON:0001869,6.75e-07,21;UBERON:0000203,6.75e-07,21|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,0.33575854382378,0,0.516493293766305,1.68946466582,2.10658073689794,0.513653904676515,0.239316476986009,0.342401459862411,0.437102012094987,1.33243904726265,0.202475267389826,0,0.473193248037357,0.548457734422955,0.42438965179803,1.02051948181284,1.09220046320974,0.783599367416806,0.159992422793407,0.68822784320151,0,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0,0.837063261473815,0,0,1.17646297606203,1.36609096991689,0.485510353031154,0.503587271902309,0.405507724878058,0.734187008646726,0.782391344348039,0.65407546914134,0.439372365468944,0.58328969722285,1.1198913730029,0,1.67782606057736,1.45072428402269,1.00828139742739,0,0.573066879877513,0,0.809265843438391,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.622137673850866,0.675029691658453,1.05162480675691,1.42825492201902,2.20868540951614,1.22490799214954,0.862609239164127,0,1.10115880999389,4.34136949489638,2.15049146558741,2.90149833006426,2.37867873366265,3.64639359389732,1.67509799400829,3.93933827022176,3.81995619442025,0,1.99320353118744,1.3047961207771,0.302904773332736,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0,2.24711072210803,0.511290967734173,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,1.29468941823586,0.29688427812965,1.73485326766136,0.304465478312141,0.461230994512117,1.05505848386836,1.41106448562846,1.0053327306374,2.22475470960936,0.86759614151947,0,1.13236794963186,0.883366073841574,0.484875253135222,0,3.51336956413857,2.93225389538837,0.510914110417183,0.479260498023681,0.599902730993408,0.254140454146129,2.99581278809645,3.66000482254901,3.76963056338593,6.25767552692195,8.18289463457058,3.1168206683934,4.38051410282946,0.509196819251581,0.995255764880744,2.27450482590307,0.210441855886474,0.780722657776222,1.83921683546778,0.540186389416048,1.20563854268572,1.2246569847239,0.768682321709099,0.562210347358373,1.03481348295606,1.29340795759705,1.13463648100692,1.58356011747554,1.31517439456545,0.278047249225598,0,0.411564272815887,0.796137067273973,0.702213187313235,0.51469581422943,0.852490498186778,1.03562886267751,1.17263029990548,1.2604344302271,1.18372367792605,0.787056926989615,0.925602677324269,0.465067889500816,0.536546802799238,2.10177616260905,1.6455984991348,1.31333971263276,2.75633952455909,2.04679982395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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:223455 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZQ89 | |||
|association_with_transcript=203bp_to_ENSMUST00000090227,NM_172606,uc007vkh.1_5end | |||
|cluster_id=chr15:31460578..31460588,- | |||
|description=CAGE_peak_3_at_March6_5end | |||
|id=chr15:31460578..31460588,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.77e-16!50;UBERON:0006238!7.77e-16!50;UBERON:0002616!3.57e-15!49;UBERON:0001049!6.89e-15!52;UBERON:0005068!6.89e-15!52;UBERON:0006241!6.89e-15!52;UBERON:0007135!6.89e-15!52;UBERON:0000033!2.34e-14!63;UBERON:0003080!2.01e-12!40;UBERON:0002346!2.71e-12!71;UBERON:0003075!2.71e-12!71;UBERON:0007284!2.71e-12!71;UBERON:0002780!6.92e-12!39;UBERON:0001890!6.92e-12!39;UBERON:0006240!6.92e-12!39;UBERON:0003056!2.54e-11!49;UBERON:0001017!1.09e-10!73;UBERON:0005743!1.09e-10!73;UBERON:0002020!1.73e-10!34;UBERON:0002791!3.95e-10!29;UBERON:0003528!3.95e-10!29;UBERON:0001893!3.95e-10!29;UBERON:0000073!1.13e-09!75;UBERON:0001016!1.13e-09!75;UBERON:0004121!3.69e-09!102;UBERON:0000924!3.69e-09!102;UBERON:0006601!3.69e-09!102;UBERON:0007811!1.31e-08!86;UBERON:0000153!1.74e-08!94;UBERON:0002021!6.90e-08!10;UBERON:0000411!6.90e-08!10;UBERON:0001950!6.90e-08!10;UBERON:0004111!1.02e-07!122;UBERON:0000025!1.42e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.79e-19,54;UBERON:0001049,9.16e-18,52;UBERON:0005068,9.16e-18,52;UBERON:0006241,9.16e-18,52;UBERON:0007135,9.16e-18,52;UBERON:0000955,8.15e-17,47;UBERON:0006238,8.15e-17,47;UBERON:0002616,5.48e-16,46;UBERON:0010314,1.50e-15,92;UBERON:0002346,4.37e-15,64;UBERON:0003075,4.37e-15,64;UBERON:0007284,4.37e-15,64;UBERON:0003080,1.13e-14,40;UBERON:0001017,1.61e-14,73;UBERON:0002780,5.56e-14,39;UBERON:0001890,5.56e-14,39;UBERON:0006240,5.56e-14,39;UBERON:0001016,1.23e-13,75;UBERON:0002020,3.10e-13,34;UBERON:0003056,1.21e-12,49;UBERON:0003528,3.87e-12,29;UBERON:0002791,3.87e-12,29;UBERON:0001893,3.87e-12,29;UBERON:0010371,6.78e-12,73;UBERON:0004121,9.94e-12,95;UBERON:0000924,9.94e-12,95;UBERON:0006601,9.94e-12,95;UBERON:0002021,6.09e-10,10;UBERON:0000411,6.09e-10,10;UBERON:0001950,6.09e-10,10;UBERON:0004111,1.42e-08,122;UBERON:0000025,1.96e-08,114;UBERON:0002619,1.82e-07,17;UBERON:0002420,3.37e-07,8;UBERON:0007245,3.37e-07,8;UBERON:0010009,3.37e-07,8;UBERON:0010011,3.37e-07,8;UBERON:0000454,3.37e-07,8;UBERON:0000956,6.75e-07,21;UBERON:0001869,6.75e-07,21;UBERON:0000203,6.75e-07,21 | |||
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| |||
|short_description=p3@March6 | |||
}} |
Revision as of 04:11, 5 August 2015
Short description: | p3@March6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_March6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 203bp_to_ENSMUST00000090227, NM_172606, uc007vkh.1_5end |
EntrezGene: | 223455 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data