FFCP PHASE1:Mm9::chr6:137201001..137201024,+: Difference between revisions
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{{FFCP|EntrezGene=19277|HGNC=|MCL_coexpression_id=914|UniProt=E9Q612,E9Q4I1|association_with_transcript=181bp_to_ENSMUST00000077115,ENSMUST00000167679,NM_001164401,NM_011216,uc009emu.2,uc009emv.2,uc009emw.2_5end|description=CAGE_peak_3_at_Ptpro_5end|id=chr6:137201001..137201024,+|ontology_enrichment_celltype=CL:0000540!2.62e-18!33;CL:0000047!2.62e-18!33;CL:0000031!2.62e-18!33;CL:0000404!2.62e-18!33;CL:0000117!6.56e-18!23;CL:0000337!6.56e-18!23;CL:0002319!1.41e-13!43;CL:0000393!2.69e-13!39;CL:0000211!2.69e-13!39;CL:0000221!6.15e-13!44;CL:0000133!6.15e-13!44;CL:0000055!1.01e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-24,23;CL:0000337,2.49e-24,23;CL:0000540,1.80e-15,33;CL:0000047,1.80e-15,33;CL:0000031,1.80e-15,33;CL:0000404,1.80e-15,33;CL:0000393,8.39e-12,39;CL:0000211,8.39e-12,39;CL:0002319,8.74e-11,43;CL:0000221,2.35e-10,44;CL:0000133,2.35e-10,44;CL:0002609,4.13e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.40e-27!73;UBERON:0005743!5.40e-27!73;UBERON:0000073!6.45e-27!75;UBERON:0001016!6.45e-27!75;UBERON:0004121!4.69e-25!102;UBERON:0000924!4.69e-25!102;UBERON:0006601!4.69e-25!102;UBERON:0002346!2.89e-24!71;UBERON:0003075!2.89e-24!71;UBERON:0007284!2.89e-24!71;UBERON:0001049!7.99e-21!52;UBERON:0005068!7.99e-21!52;UBERON:0006241!7.99e-21!52;UBERON:0007135!7.99e-21!52;UBERON:0003056!1.21e-20!49;UBERON:0000033!8.98e-20!63;UBERON:0000955!5.57e-19!50;UBERON:0006238!5.57e-19!50;UBERON:0002616!3.85e-18!49;UBERON:0003080!6.97e-18!40;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0002020!3.89e-15!34;UBERON:0002791!2.29e-11!29;UBERON:0003528!2.29e-11!29;UBERON:0001893!2.29e-11!29;UBERON:0007811!3.93e-09!86;UBERON:0000153!5.07e-08!94;UBERON:0001894!4.55e-07!10;UBERON:0006222!4.55e-07!10;UBERON:0002420!7.30e-07!8;UBERON:0007245!7.30e-07!8;UBERON:0010009!7.30e-07!8;UBERON:0010011!7.30e-07!8;UBERON:0000454!7.30e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-28,54;UBERON:0002346,6.69e-28,64;UBERON:0003075,6.69e-28,64;UBERON:0007284,6.69e-28,64;UBERON:0001049,1.99e-26,52;UBERON:0005068,1.99e-26,52;UBERON:0006241,1.99e-26,52;UBERON:0007135,1.99e-26,52;UBERON:0001017,2.95e-26,73;UBERON:0001016,4.19e-25,75;UBERON:0003056,2.52e-24,49;UBERON:0004121,1.24e-22,95;UBERON:0000924,1.24e-22,95;UBERON:0006601,1.24e-22,95;UBERON:0010371,1.79e-22,73;UBERON:0003080,3.22e-22,40;UBERON:0000955,1.66e-21,47;UBERON:0006238,1.66e-21,47;UBERON:0002780,2.93e-21,39;UBERON:0001890,2.93e-21,39;UBERON:0006240,2.93e-21,39;UBERON:0002616,2.14e-20,46;UBERON:0002020,1.45e-19,34;UBERON:0010314,3.41e-16,92;UBERON:0003528,2.17e-14,29;UBERON:0002791,2.17e-14,29;UBERON:0001893,2.17e-14,29;UBERON:0002420,5.98e-09,8;UBERON:0007245,5.98e-09,8;UBERON:0010009,5.98e-09,8;UBERON:0010011,5.98e-09,8;UBERON:0000454,5.98e-09,8;UBERON:0001894,6.06e-08,10;UBERON:0006222,6.06e-08,10;UBERON:0000956,1.03e-07,21;UBERON:0001869,1.03e-07,21;UBERON:0000203,1.03e-07,21;UBERON:0002240,1.39e-07,6;UBERON:0005174,1.39e-07,6;UBERON:0001137,1.39e-07,6;UBERON:0000489,2.06e-07,21;UBERON:0001948,5.09e-07,5;UBERON:0002315,5.09e-07,5;UBERON:0000369,8.91e-07,5;UBERON:0002435,8.91e-07,5;UBERON:0000204,8.91e-07,5;UBERON:0010082,8.91e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7806839470486,14.8117474196169,9.50747105259269,0,0,0,0,0,1.19840044207362,0.384218305321555,3.31806759387129,2.97013064329719,2.52389953621658,5.42736870367227,6.40518768759679,5.63457676388789,4.40889166683887,4.5960939330501,4.40463523997555,1.40456071893706,2.61131106535614,16.2220133908138,15.186948838,10.4182674111352,1.3959149950069,2.8138130501584,3.97275444219706,7.07108605136802,8.25755748634797,9.87917062874093,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,1.21786191324856,0.230615497256059,0.60289056221049,1.29347577849275,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,3.89455662452539,2.28750301409313,4.39790232395025,1.39059456153821,3.06858548796397,2.28566849015516,3.56930778749067,0,0,0,0.631325567659422,0,0.459804208866946,1.44049703844279,1.05493372485001,2.65342346690179,2.17793324484245,4.31027932974753,2.58703370739016,0.215567992932842,0,0,0.43839146485515,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,2.10289948564127,4.73361216944708,0,0,0,0.696710015581316,0.644337306610467,0.605050573870028,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,1.5994791765362,3.38123207019241,1.4255592949172,3.29719228184964,2.59502533594179,3.41477300470989,1.91893192373483,1.8839847340965,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.52375192569864,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,0.891194696329576,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,40.4864858691477,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,6.80879211507576,0.720244376125241,1.29358683782755,1.50035924522115,6.38424841112185,3.92411398724555,5.43011767986999,3.65357938937519,0,0,0,0,0.484393280087717,0.180938774784468,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,1.01659733563424,0.324016022465404,0.418176592028937,0,0.269728692769641,0.41326727862668,0,0,0,0,0.448549638131936,0,0,0,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,1.71868654031819,1.03111909406213,2.05524755931193,0,2.02506750069542,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,1.99512436700516,1.19513524027894,0.972426868273176,0.838452650511929,0.735374033800057,1.11123363900808,1.44224540067226,1.92551525755089,2.02157769411038,1.2673964994512,2.26351609663291,1.591905626988,1.92075457214608,1.66562859971278,0.476293691283074,1.27472758539341,1.54327376370964,1.23625770240992,1.61918812147837,0.685738504770831,0.70990322463735,0.715308569841963,0.872078499793971,2.72917203204459,1.35383372626682,1.64635175585495,1.31534855718921,0.814824683075171,2.24456908663095,1.30498519936592,1.47756723563345,1.63692417267876,0.929621047115796,1.15743966588685,1.99848462350357,1.40358965067245,1.28922632428979,0.57386499620653,0.441182838239031,0|short_description=p3@Ptpro}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19277 | |||
|HGNC= | |||
|MCL_coexpression_id=914 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q612,uniprot:E9Q4I1 | |||
|association_with_transcript=181bp_to_ENSMUST00000077115,ENSMUST00000167679,NM_001164401,NM_011216,uc009emu.2,uc009emv.2,uc009emw.2_5end | |||
|cluster_id=chr6:137201001..137201024,+ | |||
|description=CAGE_peak_3_at_Ptpro_5end | |||
|id=chr6:137201001..137201024,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.62e-18!33;CL:0000047!2.62e-18!33;CL:0000031!2.62e-18!33;CL:0000404!2.62e-18!33;CL:0000117!6.56e-18!23;CL:0000337!6.56e-18!23;CL:0002319!1.41e-13!43;CL:0000393!2.69e-13!39;CL:0000211!2.69e-13!39;CL:0000221!6.15e-13!44;CL:0000133!6.15e-13!44;CL:0000055!1.01e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-24,23;CL:0000337,2.49e-24,23;CL:0000540,1.80e-15,33;CL:0000047,1.80e-15,33;CL:0000031,1.80e-15,33;CL:0000404,1.80e-15,33;CL:0000393,8.39e-12,39;CL:0000211,8.39e-12,39;CL:0002319,8.74e-11,43;CL:0000221,2.35e-10,44;CL:0000133,2.35e-10,44;CL:0002609,4.13e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.40e-27!73;UBERON:0005743!5.40e-27!73;UBERON:0000073!6.45e-27!75;UBERON:0001016!6.45e-27!75;UBERON:0004121!4.69e-25!102;UBERON:0000924!4.69e-25!102;UBERON:0006601!4.69e-25!102;UBERON:0002346!2.89e-24!71;UBERON:0003075!2.89e-24!71;UBERON:0007284!2.89e-24!71;UBERON:0001049!7.99e-21!52;UBERON:0005068!7.99e-21!52;UBERON:0006241!7.99e-21!52;UBERON:0007135!7.99e-21!52;UBERON:0003056!1.21e-20!49;UBERON:0000033!8.98e-20!63;UBERON:0000955!5.57e-19!50;UBERON:0006238!5.57e-19!50;UBERON:0002616!3.85e-18!49;UBERON:0003080!6.97e-18!40;UBERON:0002780!3.53e-17!39;UBERON:0001890!3.53e-17!39;UBERON:0006240!3.53e-17!39;UBERON:0002020!3.89e-15!34;UBERON:0002791!2.29e-11!29;UBERON:0003528!2.29e-11!29;UBERON:0001893!2.29e-11!29;UBERON:0007811!3.93e-09!86;UBERON:0000153!5.07e-08!94;UBERON:0001894!4.55e-07!10;UBERON:0006222!4.55e-07!10;UBERON:0002420!7.30e-07!8;UBERON:0007245!7.30e-07!8;UBERON:0010009!7.30e-07!8;UBERON:0010011!7.30e-07!8;UBERON:0000454!7.30e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-28,54;UBERON:0002346,6.69e-28,64;UBERON:0003075,6.69e-28,64;UBERON:0007284,6.69e-28,64;UBERON:0001049,1.99e-26,52;UBERON:0005068,1.99e-26,52;UBERON:0006241,1.99e-26,52;UBERON:0007135,1.99e-26,52;UBERON:0001017,2.95e-26,73;UBERON:0001016,4.19e-25,75;UBERON:0003056,2.52e-24,49;UBERON:0004121,1.24e-22,95;UBERON:0000924,1.24e-22,95;UBERON:0006601,1.24e-22,95;UBERON:0010371,1.79e-22,73;UBERON:0003080,3.22e-22,40;UBERON:0000955,1.66e-21,47;UBERON:0006238,1.66e-21,47;UBERON:0002780,2.93e-21,39;UBERON:0001890,2.93e-21,39;UBERON:0006240,2.93e-21,39;UBERON:0002616,2.14e-20,46;UBERON:0002020,1.45e-19,34;UBERON:0010314,3.41e-16,92;UBERON:0003528,2.17e-14,29;UBERON:0002791,2.17e-14,29;UBERON:0001893,2.17e-14,29;UBERON:0002420,5.98e-09,8;UBERON:0007245,5.98e-09,8;UBERON:0010009,5.98e-09,8;UBERON:0010011,5.98e-09,8;UBERON:0000454,5.98e-09,8;UBERON:0001894,6.06e-08,10;UBERON:0006222,6.06e-08,10;UBERON:0000956,1.03e-07,21;UBERON:0001869,1.03e-07,21;UBERON:0000203,1.03e-07,21;UBERON:0002240,1.39e-07,6;UBERON:0005174,1.39e-07,6;UBERON:0001137,1.39e-07,6;UBERON:0000489,2.06e-07,21;UBERON:0001948,5.09e-07,5;UBERON:0002315,5.09e-07,5;UBERON:0000369,8.91e-07,5;UBERON:0002435,8.91e-07,5;UBERON:0000204,8.91e-07,5;UBERON:0010082,8.91e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7806839470486,14.8117474196169,9.50747105259269,0,0,0,0,0,1.19840044207362,0.384218305321555,3.31806759387129,2.97013064329719,2.52389953621658,5.42736870367227,6.40518768759679,5.63457676388789,4.40889166683887,4.5960939330501,4.40463523997555,1.40456071893706,2.61131106535614,16.2220133908138,15.186948838,10.4182674111352,1.3959149950069,2.8138130501584,3.97275444219706,7.07108605136802,8.25755748634797,9.87917062874093,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,1.21786191324856,0.230615497256059,0.60289056221049,1.29347577849275,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,3.89455662452539,2.28750301409313,4.39790232395025,1.39059456153821,3.06858548796397,2.28566849015516,3.56930778749067,0,0,0,0.631325567659422,0,0.459804208866946,1.44049703844279,1.05493372485001,2.65342346690179,2.17793324484245,4.31027932974753,2.58703370739016,0.215567992932842,0,0,0.43839146485515,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,2.10289948564127,4.73361216944708,0,0,0,0.696710015581316,0.644337306610467,0.605050573870028,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,1.5994791765362,3.38123207019241,1.4255592949172,3.29719228184964,2.59502533594179,3.41477300470989,1.91893192373483,1.8839847340965,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.52375192569864,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,0.891194696329576,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,40.4864858691477,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,6.80879211507576,0.720244376125241,1.29358683782755,1.50035924522115,6.38424841112185,3.92411398724555,5.43011767986999,3.65357938937519,0,0,0,0,0.484393280087717,0.180938774784468,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,1.01659733563424,0.324016022465404,0.418176592028937,0,0.269728692769641,0.41326727862668,0,0,0,0,0.448549638131936,0,0,0,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,1.71868654031819,1.03111909406213,2.05524755931193,0,2.02506750069542,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,1.99512436700516,1.19513524027894,0.972426868273176,0.838452650511929,0.735374033800057,1.11123363900808,1.44224540067226,1.92551525755089,2.02157769411038,1.2673964994512,2.26351609663291,1.591905626988,1.92075457214608,1.66562859971278,0.476293691283074,1.27472758539341,1.54327376370964,1.23625770240992,1.61918812147837,0.685738504770831,0.70990322463735,0.715308569841963,0.872078499793971,2.72917203204459,1.35383372626682,1.64635175585495,1.31534855718921,0.814824683075171,2.24456908663095,1.30498519936592,1.47756723563345,1.63692417267876,0.929621047115796,1.15743966588685,1.99848462350357,1.40358965067245,1.28922632428979,0.57386499620653,0.441182838239031,0 | |||
|short_description=p3@Ptpro | |||
}} |
Revision as of 08:30, 5 August 2015
Short description: | p3@Ptpro |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptpro_5end |
Coexpression cluster: | MCL_coexpression_mm9:914 |
Association with transcript: | 181bp_to_ENSMUST00000077115, ENSMUST00000167679, NM_001164401, NM_011216, uc009emu.2, uc009emv.2, uc009emw.2_5end |
EntrezGene: | 19277 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.49e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.49e-24 | 23 |
neuron | 1.80e-15 | 33 |
neuronal stem cell | 1.80e-15 | 33 |
neuroblast | 1.80e-15 | 33 |
electrically signaling cell | 1.80e-15 | 33 |
electrically responsive cell | 8.39e-12 | 39 |
electrically active cell | 8.39e-12 | 39 |
neural cell | 8.74e-11 | 43 |
ectodermal cell | 2.35e-10 | 44 |
neurectodermal cell | 2.35e-10 | 44 |
neuron of cerebral cortex | 4.13e-07 | 6 |