FFCP PHASE1:Mm9::chr4:32252088..32252105,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:32252088..32252105,+|id=chr4:32252088..32252105,+|ontology_enrichment_celltype=CL:0000553!2.65e-09!6;CL:0000556!2.65e-09!6;CL:0002031!7.98e-09!25;CL:0000838!7.38e-07!12|ontology_enrichment_celltype_v019_2=CL:0002031,1.03e-17,25;CL:0000553,2.72e-16,6;CL:0000556,2.72e-16,6;CL:0000988,2.01e-13,32;CL:0002032,2.01e-13,32;CL:0000037,2.01e-13,32;CL:0000837,2.01e-13,32;CL:0000838,6.07e-12,12;CL:0000791,2.27e-11,9;CL:0000789,2.27e-11,9;CL:0002420,2.27e-11,9;CL:0002419,2.27e-11,9;CL:0000790,2.27e-11,9;CL:0000542,5.56e-11,13;CL:0000051,5.56e-11,13;CL:0000050,8.43e-11,9;CL:0000084,2.95e-09,11;CL:0000827,2.95e-09,11;CL:0002320,9.38e-09,46;CL:0000134,9.38e-09,46;CL:0000624,1.46e-08,8;CL:0000738,2.93e-08,17;CL:0002087,2.93e-08,17;CL:0000839,2.09e-07,13;CL:0000219,3.56e-07,54;CL:0000893,7.00e-07,6;CL:0002489,7.00e-07,6;CL:0000898,7.00e-07,6;CL:0000809,7.00e-07,6;CL:0000810,7.00e-07,6;CL:0000895,7.00e-07,6;CL:0000808,7.00e-07,6;CL:0000894,7.00e-07,6;CL:0000806,7.00e-07,6;CL:0000807,7.00e-07,6;CL:0000805,7.00e-07,6;CL:0002425,7.00e-07,6;CL:0002436,7.00e-07,6;CL:0002427,7.00e-07,6;CL:0002428,7.00e-07,6;CL:0002429,7.00e-07,6;CL:0002433,7.00e-07,6;CL:0002431,7.00e-07,6;CL:0002432,7.00e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.17e-17!48;UBERON:0002390!5.02e-17!45;UBERON:0003061!5.02e-17!45;UBERON:0004177!6.32e-17!29;UBERON:0002405!4.66e-14!70;UBERON:0003408!1.18e-13!24;UBERON:0002370!1.26e-12!23;UBERON:0000974!1.26e-12!23;UBERON:0004807!1.26e-12!23;UBERON:0005058!1.26e-12!23;UBERON:0003351!1.26e-12!23;UBERON:0009113!1.26e-12!23;UBERON:0003295!1.26e-12!23;UBERON:0009722!1.26e-12!23;UBERON:0005562!1.26e-12!23;UBERON:0007690!1.26e-12!23;UBERON:0005057!4.97e-12!51;UBERON:0006562!6.65e-12!24;UBERON:0001557!6.65e-12!24;UBERON:0001042!6.65e-12!24;UBERON:0008814!6.65e-12!24;UBERON:0009145!6.65e-12!24;UBERON:0001004!8.85e-12!42;UBERON:0003081!5.03e-11!88;UBERON:0000065!6.23e-11!41;UBERON:0000072!4.55e-10!27;UBERON:0000077!1.40e-09!97;UBERON:0001041!4.13e-09!92;UBERON:0000926!4.88e-08!193;UBERON:0004120!4.88e-08!193;UBERON:0006603!4.88e-08!193;UBERON:0000063!9.37e-08!35;UBERON:0003104!1.36e-07!131;UBERON:0009142!1.36e-07!131;UBERON:0005911!1.51e-07!69;UBERON:0004119!1.80e-07!130;UBERON:0000925!1.80e-07!130;UBERON:0006595!1.80e-07!130;UBERON:0004921!7.27e-07!126;UBERON:0004185!7.27e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.50e-18,48;UBERON:0002405,3.50e-18,48;UBERON:0002390,6.76e-17,45;UBERON:0003061,6.76e-17,45;UBERON:0004177,7.44e-12,29;UBERON:0005057,7.44e-12,29;UBERON:0003081,2.17e-11,87;UBERON:0000077,1.52e-09,35;UBERON:0002384,9.38e-09,46;UBERON:0001474,5.91e-08,22;UBERON:0004765,5.91e-08,22;UBERON:0001434,5.91e-08,22;UBERON:0002370,1.29e-07,23;UBERON:0000974,1.29e-07,23;UBERON:0004807,1.29e-07,23;UBERON:0005058,1.29e-07,23;UBERON:0003351,1.29e-07,23;UBERON:0009113,1.29e-07,23;UBERON:0003295,1.29e-07,23;UBERON:0009722,1.29e-07,23;UBERON:0005562,1.29e-07,23;UBERON:0007690,1.29e-07,23;UBERON:0000926,2.32e-07,120;UBERON:0004120,2.32e-07,120;UBERON:0006603,2.32e-07,120;UBERON:0006562,2.90e-07,24;UBERON:0003408,2.90e-07,24;UBERON:0001557,2.90e-07,24;UBERON:0001042,2.90e-07,24;UBERON:0008814,2.90e-07,24;UBERON:0009145,2.90e-07,24|phase1_expression=0,0,0,0,0,0,0,0,5.91312633037,0,13.8686554262659,0,6.67682846731702,0.0874204024189974,0.333109761815663,1.21485160433896,2.09868563438444,5.20512572841092,7.40417941470989,2.97072756258621,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2599808521304,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,3.5384422077995,0,2.20841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,1.61729061793121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0.763877555344259,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,1.03610989119537,0.578596234326046,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.36696704638282,0,0.185194527369712,0.188368457004691,2.05041341581538,3.88922894451088,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,2.8441000856536,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.480781798079875,1.03382669022204,0.504832249740738,0.838274873204998,0.504130925684203,0.877120926657772,1.82802499116626,2.57129184799452,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr4:32252088..32252105,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:32252088..32252105,+ | |||
|description=CAGE_peak_at_chr4:32252088..32252105,+ | |||
|id=chr4:32252088..32252105,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.65e-09!6;CL:0000556!2.65e-09!6;CL:0002031!7.98e-09!25;CL:0000838!7.38e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.03e-17,25;CL:0000553,2.72e-16,6;CL:0000556,2.72e-16,6;CL:0000988,2.01e-13,32;CL:0002032,2.01e-13,32;CL:0000037,2.01e-13,32;CL:0000837,2.01e-13,32;CL:0000838,6.07e-12,12;CL:0000791,2.27e-11,9;CL:0000789,2.27e-11,9;CL:0002420,2.27e-11,9;CL:0002419,2.27e-11,9;CL:0000790,2.27e-11,9;CL:0000542,5.56e-11,13;CL:0000051,5.56e-11,13;CL:0000050,8.43e-11,9;CL:0000084,2.95e-09,11;CL:0000827,2.95e-09,11;CL:0002320,9.38e-09,46;CL:0000134,9.38e-09,46;CL:0000624,1.46e-08,8;CL:0000738,2.93e-08,17;CL:0002087,2.93e-08,17;CL:0000839,2.09e-07,13;CL:0000219,3.56e-07,54;CL:0000893,7.00e-07,6;CL:0002489,7.00e-07,6;CL:0000898,7.00e-07,6;CL:0000809,7.00e-07,6;CL:0000810,7.00e-07,6;CL:0000895,7.00e-07,6;CL:0000808,7.00e-07,6;CL:0000894,7.00e-07,6;CL:0000806,7.00e-07,6;CL:0000807,7.00e-07,6;CL:0000805,7.00e-07,6;CL:0002425,7.00e-07,6;CL:0002436,7.00e-07,6;CL:0002427,7.00e-07,6;CL:0002428,7.00e-07,6;CL:0002429,7.00e-07,6;CL:0002433,7.00e-07,6;CL:0002431,7.00e-07,6;CL:0002432,7.00e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.17e-17!48;UBERON:0002390!5.02e-17!45;UBERON:0003061!5.02e-17!45;UBERON:0004177!6.32e-17!29;UBERON:0002405!4.66e-14!70;UBERON:0003408!1.18e-13!24;UBERON:0002370!1.26e-12!23;UBERON:0000974!1.26e-12!23;UBERON:0004807!1.26e-12!23;UBERON:0005058!1.26e-12!23;UBERON:0003351!1.26e-12!23;UBERON:0009113!1.26e-12!23;UBERON:0003295!1.26e-12!23;UBERON:0009722!1.26e-12!23;UBERON:0005562!1.26e-12!23;UBERON:0007690!1.26e-12!23;UBERON:0005057!4.97e-12!51;UBERON:0006562!6.65e-12!24;UBERON:0001557!6.65e-12!24;UBERON:0001042!6.65e-12!24;UBERON:0008814!6.65e-12!24;UBERON:0009145!6.65e-12!24;UBERON:0001004!8.85e-12!42;UBERON:0003081!5.03e-11!88;UBERON:0000065!6.23e-11!41;UBERON:0000072!4.55e-10!27;UBERON:0000077!1.40e-09!97;UBERON:0001041!4.13e-09!92;UBERON:0000926!4.88e-08!193;UBERON:0004120!4.88e-08!193;UBERON:0006603!4.88e-08!193;UBERON:0000063!9.37e-08!35;UBERON:0003104!1.36e-07!131;UBERON:0009142!1.36e-07!131;UBERON:0005911!1.51e-07!69;UBERON:0004119!1.80e-07!130;UBERON:0000925!1.80e-07!130;UBERON:0006595!1.80e-07!130;UBERON:0004921!7.27e-07!126;UBERON:0004185!7.27e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.50e-18,48;UBERON:0002405,3.50e-18,48;UBERON:0002390,6.76e-17,45;UBERON:0003061,6.76e-17,45;UBERON:0004177,7.44e-12,29;UBERON:0005057,7.44e-12,29;UBERON:0003081,2.17e-11,87;UBERON:0000077,1.52e-09,35;UBERON:0002384,9.38e-09,46;UBERON:0001474,5.91e-08,22;UBERON:0004765,5.91e-08,22;UBERON:0001434,5.91e-08,22;UBERON:0002370,1.29e-07,23;UBERON:0000974,1.29e-07,23;UBERON:0004807,1.29e-07,23;UBERON:0005058,1.29e-07,23;UBERON:0003351,1.29e-07,23;UBERON:0009113,1.29e-07,23;UBERON:0003295,1.29e-07,23;UBERON:0009722,1.29e-07,23;UBERON:0005562,1.29e-07,23;UBERON:0007690,1.29e-07,23;UBERON:0000926,2.32e-07,120;UBERON:0004120,2.32e-07,120;UBERON:0006603,2.32e-07,120;UBERON:0006562,2.90e-07,24;UBERON:0003408,2.90e-07,24;UBERON:0001557,2.90e-07,24;UBERON:0001042,2.90e-07,24;UBERON:0008814,2.90e-07,24;UBERON:0009145,2.90e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,5.91312633037,0,13.8686554262659,0,6.67682846731702,0.0874204024189974,0.333109761815663,1.21485160433896,2.09868563438444,5.20512572841092,7.40417941470989,2.97072756258621,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2599808521304,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,3.5384422077995,0,2.20841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,1.61729061793121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0.763877555344259,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.327726629431476,1.03610989119537,0.578596234326046,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.36696704638282,0,0.185194527369712,0.188368457004691,2.05041341581538,3.88922894451088,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,2.8441000856536,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.480781798079875,1.03382669022204,0.504832249740738,0.838274873204998,0.504130925684203,0.877120926657772,1.82802499116626,2.57129184799452,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:32252088..32252105,+ | |||
}} |
Latest revision as of 09:05, 5 August 2015
Short description: | p@chr4:32252088..32252105, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:32252088..32252105, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.50e-18 | 48 |
immune system | 3.50e-18 | 48 |
hematopoietic system | 6.76e-17 | 45 |
blood island | 6.76e-17 | 45 |
hemopoietic organ | 7.44e-12 | 29 |
immune organ | 7.44e-12 | 29 |
lateral plate mesoderm | 2.17e-11 | 87 |
mixed endoderm/mesoderm-derived structure | 1.52e-09 | 35 |
connective tissue | 9.38e-09 | 46 |
bone element | 5.91e-08 | 22 |
skeletal element | 5.91e-08 | 22 |
skeletal system | 5.91e-08 | 22 |
thymus | 1.29e-07 | 23 |
neck | 1.29e-07 | 23 |
respiratory system epithelium | 1.29e-07 | 23 |
hemolymphoid system gland | 1.29e-07 | 23 |
pharyngeal epithelium | 1.29e-07 | 23 |
thymic region | 1.29e-07 | 23 |
pharyngeal gland | 1.29e-07 | 23 |
entire pharyngeal arch endoderm | 1.29e-07 | 23 |
thymus primordium | 1.29e-07 | 23 |
early pharyngeal endoderm | 1.29e-07 | 23 |
mesoderm | 2.32e-07 | 120 |
mesoderm-derived structure | 2.32e-07 | 120 |
presumptive mesoderm | 2.32e-07 | 120 |
pharynx | 2.90e-07 | 24 |
gland of gut | 2.90e-07 | 24 |
upper respiratory tract | 2.90e-07 | 24 |
chordate pharynx | 2.90e-07 | 24 |
pharyngeal arch system | 2.90e-07 | 24 |
pharyngeal region of foregut | 2.90e-07 | 24 |