FFCP PHASE1:Mm9::chr9:59437137..59437160,+: Difference between revisions
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{{FFCP|EntrezGene=76183|HGNC=|MCL_coexpression_id=159|UniProt=D3YX51,Q7TN33|association_with_transcript=0bp_to_ENSMUST00000118164,uc009pxy.1,uc012guo.1_5end|description=CAGE_peak_2_at_Celf6_5end|id=chr9:59437137..59437160,+|ontology_enrichment_celltype=CL:0000117!1.89e-19!23;CL:0000337!1.89e-19!23;CL:0000540!2.74e-11!33;CL:0000047!2.74e-11!33;CL:0000031!2.74e-11!33;CL:0000404!2.74e-11!33;CL:0000393!1.70e-08!39;CL:0000211!1.70e-08!39;CL:0002319!4.18e-07!43;CL:0000221!8.41e-07!44;CL:0000133!8.41e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-28,23;CL:0000337,3.34e-28,23;CL:0000540,1.56e-18,33;CL:0000047,1.56e-18,33;CL:0000031,1.56e-18,33;CL:0000404,1.56e-18,33;CL:0000393,4.08e-15,39;CL:0000211,4.08e-15,39;CL:0002319,2.28e-13,43;CL:0000221,5.54e-13,44;CL:0000133,5.54e-13,44;CL:0002614,9.06e-10,3;CL:0002613,9.67e-10,3;CL:0002610,2.87e-09,3;CL:0000120,6.85e-09,3;CL:0002321,7.61e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.51e-28!52;UBERON:0005068!1.51e-28!52;UBERON:0006241!1.51e-28!52;UBERON:0007135!1.51e-28!52;UBERON:0000955!5.94e-27!50;UBERON:0006238!5.94e-27!50;UBERON:0001017!2.38e-26!73;UBERON:0005743!2.38e-26!73;UBERON:0002616!7.41e-26!49;UBERON:0000073!3.36e-25!75;UBERON:0001016!3.36e-25!75;UBERON:0000033!3.04e-24!63;UBERON:0003080!7.39e-24!40;UBERON:0003056!1.67e-23!49;UBERON:0002780!1.04e-22!39;UBERON:0001890!1.04e-22!39;UBERON:0006240!1.04e-22!39;UBERON:0002346!2.81e-22!71;UBERON:0003075!2.81e-22!71;UBERON:0007284!2.81e-22!71;UBERON:0002020!4.48e-22!34;UBERON:0004121!2.26e-18!102;UBERON:0000924!2.26e-18!102;UBERON:0006601!2.26e-18!102;UBERON:0002791!2.80e-17!29;UBERON:0003528!2.80e-17!29;UBERON:0001893!2.80e-17!29;UBERON:0007811!7.13e-14!86;UBERON:0000153!1.57e-11!94;UBERON:0002420!1.68e-10!8;UBERON:0007245!1.68e-10!8;UBERON:0010009!1.68e-10!8;UBERON:0010011!1.68e-10!8;UBERON:0000454!1.68e-10!8;UBERON:0000956!3.60e-09!21;UBERON:0001869!3.60e-09!21;UBERON:0000203!3.60e-09!21;UBERON:0002298!3.30e-08!6;UBERON:0002619!5.59e-08!17;UBERON:0002021!9.17e-08!10;UBERON:0000411!9.17e-08!10;UBERON:0001950!9.17e-08!10;UBERON:0002240!2.91e-07!6;UBERON:0005174!2.91e-07!6;UBERON:0001137!2.91e-07!6;UBERON:0000369!5.73e-07!5;UBERON:0002435!5.73e-07!5;UBERON:0000204!5.73e-07!5;UBERON:0010082!5.73e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-30,73;UBERON:0001016,2.00e-29,75;UBERON:0000073,5.86e-29,54;UBERON:0001049,4.83e-25,52;UBERON:0005068,4.83e-25,52;UBERON:0006241,4.83e-25,52;UBERON:0007135,4.83e-25,52;UBERON:0002420,3.03e-22,8;UBERON:0007245,3.03e-22,8;UBERON:0010009,3.03e-22,8;UBERON:0010011,3.03e-22,8;UBERON:0000454,3.03e-22,8;UBERON:0004121,6.04e-22,95;UBERON:0000924,6.04e-22,95;UBERON:0006601,6.04e-22,95;UBERON:0002020,1.16e-21,34;UBERON:0002346,2.34e-19,64;UBERON:0003075,2.34e-19,64;UBERON:0007284,2.34e-19,64;UBERON:0000955,4.95e-19,47;UBERON:0006238,4.95e-19,47;UBERON:0002616,2.24e-17,46;UBERON:0010371,2.55e-16,73;UBERON:0003080,3.20e-16,40;UBERON:0003528,2.05e-15,29;UBERON:0002791,2.05e-15,29;UBERON:0001893,2.05e-15,29;UBERON:0002780,1.56e-14,39;UBERON:0001890,1.56e-14,39;UBERON:0006240,1.56e-14,39;UBERON:0000369,4.42e-14,5;UBERON:0002435,4.42e-14,5;UBERON:0000204,4.42e-14,5;UBERON:0010082,4.42e-14,5;UBERON:0003056,1.55e-12,49;UBERON:0002950,1.97e-12,4;UBERON:0001891,1.97e-12,4;UBERON:0009616,1.97e-12,4;UBERON:0010286,1.97e-12,4;UBERON:0010314,7.33e-12,92;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0002038,9.06e-10,3;UBERON:0009663,9.06e-10,3;UBERON:0009661,9.06e-10,3;UBERON:0000125,9.06e-10,3;UBERON:0002308,9.06e-10,3;UBERON:0003076,9.09e-10,12;UBERON:0003057,9.09e-10,12;UBERON:0004684,2.87e-09,3;UBERON:0002275,2.87e-09,3;UBERON:0000025,1.46e-08,114;UBERON:0001948,2.13e-08,5;UBERON:0002315,2.13e-08,5;UBERON:0004111,1.16e-07,122;UBERON:0011216,1.58e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0,0.420649922702764,2.28520787523043,1.76694832761291,0.61245399607477,0.287536413054709,0,3.30347642998166,4.59674417106676,5.06901559745603,7.12185953743047,6.95306091378313,5.2091337055676,4.18774498502071,10.1297269805702,12.6822545654752,2.35702868378934,2.13557521198654,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39246301857362,2.74500361691176,1.13088916901578,1.73824320192276,0.767146371990992,5.81806524766768,3.56930778749067,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.388902376688095,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,2.06223818812425,1.37016503954128,0,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0,1.01078884705519,1.01391719956096,0.565879024158229,0.187283014939765,0.512201219238954,0.34461281373368,0.476293691283074,0.231768651889711,0.38581844092741,0,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.591026894253381,0,0.619747364743864,0.578719832943424,0.999242311751784,0.233931608445408,0,0,0.220591419119515,0|short_description=p2@Celf6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76183 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YX51,uniprot:Q7TN33 | |||
|association_with_transcript=0bp_to_ENSMUST00000118164,uc009pxy.1,uc012guo.1_5end | |||
|cluster_id=chr9:59437137..59437160,+ | |||
|description=CAGE_peak_2_at_Celf6_5end | |||
|id=chr9:59437137..59437160,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.89e-19!23;CL:0000337!1.89e-19!23;CL:0000540!2.74e-11!33;CL:0000047!2.74e-11!33;CL:0000031!2.74e-11!33;CL:0000404!2.74e-11!33;CL:0000393!1.70e-08!39;CL:0000211!1.70e-08!39;CL:0002319!4.18e-07!43;CL:0000221!8.41e-07!44;CL:0000133!8.41e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-28,23;CL:0000337,3.34e-28,23;CL:0000540,1.56e-18,33;CL:0000047,1.56e-18,33;CL:0000031,1.56e-18,33;CL:0000404,1.56e-18,33;CL:0000393,4.08e-15,39;CL:0000211,4.08e-15,39;CL:0002319,2.28e-13,43;CL:0000221,5.54e-13,44;CL:0000133,5.54e-13,44;CL:0002614,9.06e-10,3;CL:0002613,9.67e-10,3;CL:0002610,2.87e-09,3;CL:0000120,6.85e-09,3;CL:0002321,7.61e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.51e-28!52;UBERON:0005068!1.51e-28!52;UBERON:0006241!1.51e-28!52;UBERON:0007135!1.51e-28!52;UBERON:0000955!5.94e-27!50;UBERON:0006238!5.94e-27!50;UBERON:0001017!2.38e-26!73;UBERON:0005743!2.38e-26!73;UBERON:0002616!7.41e-26!49;UBERON:0000073!3.36e-25!75;UBERON:0001016!3.36e-25!75;UBERON:0000033!3.04e-24!63;UBERON:0003080!7.39e-24!40;UBERON:0003056!1.67e-23!49;UBERON:0002780!1.04e-22!39;UBERON:0001890!1.04e-22!39;UBERON:0006240!1.04e-22!39;UBERON:0002346!2.81e-22!71;UBERON:0003075!2.81e-22!71;UBERON:0007284!2.81e-22!71;UBERON:0002020!4.48e-22!34;UBERON:0004121!2.26e-18!102;UBERON:0000924!2.26e-18!102;UBERON:0006601!2.26e-18!102;UBERON:0002791!2.80e-17!29;UBERON:0003528!2.80e-17!29;UBERON:0001893!2.80e-17!29;UBERON:0007811!7.13e-14!86;UBERON:0000153!1.57e-11!94;UBERON:0002420!1.68e-10!8;UBERON:0007245!1.68e-10!8;UBERON:0010009!1.68e-10!8;UBERON:0010011!1.68e-10!8;UBERON:0000454!1.68e-10!8;UBERON:0000956!3.60e-09!21;UBERON:0001869!3.60e-09!21;UBERON:0000203!3.60e-09!21;UBERON:0002298!3.30e-08!6;UBERON:0002619!5.59e-08!17;UBERON:0002021!9.17e-08!10;UBERON:0000411!9.17e-08!10;UBERON:0001950!9.17e-08!10;UBERON:0002240!2.91e-07!6;UBERON:0005174!2.91e-07!6;UBERON:0001137!2.91e-07!6;UBERON:0000369!5.73e-07!5;UBERON:0002435!5.73e-07!5;UBERON:0000204!5.73e-07!5;UBERON:0010082!5.73e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-30,73;UBERON:0001016,2.00e-29,75;UBERON:0000073,5.86e-29,54;UBERON:0001049,4.83e-25,52;UBERON:0005068,4.83e-25,52;UBERON:0006241,4.83e-25,52;UBERON:0007135,4.83e-25,52;UBERON:0002420,3.03e-22,8;UBERON:0007245,3.03e-22,8;UBERON:0010009,3.03e-22,8;UBERON:0010011,3.03e-22,8;UBERON:0000454,3.03e-22,8;UBERON:0004121,6.04e-22,95;UBERON:0000924,6.04e-22,95;UBERON:0006601,6.04e-22,95;UBERON:0002020,1.16e-21,34;UBERON:0002346,2.34e-19,64;UBERON:0003075,2.34e-19,64;UBERON:0007284,2.34e-19,64;UBERON:0000955,4.95e-19,47;UBERON:0006238,4.95e-19,47;UBERON:0002616,2.24e-17,46;UBERON:0010371,2.55e-16,73;UBERON:0003080,3.20e-16,40;UBERON:0003528,2.05e-15,29;UBERON:0002791,2.05e-15,29;UBERON:0001893,2.05e-15,29;UBERON:0002780,1.56e-14,39;UBERON:0001890,1.56e-14,39;UBERON:0006240,1.56e-14,39;UBERON:0000369,4.42e-14,5;UBERON:0002435,4.42e-14,5;UBERON:0000204,4.42e-14,5;UBERON:0010082,4.42e-14,5;UBERON:0003056,1.55e-12,49;UBERON:0002950,1.97e-12,4;UBERON:0001891,1.97e-12,4;UBERON:0009616,1.97e-12,4;UBERON:0010286,1.97e-12,4;UBERON:0010314,7.33e-12,92;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0002038,9.06e-10,3;UBERON:0009663,9.06e-10,3;UBERON:0009661,9.06e-10,3;UBERON:0000125,9.06e-10,3;UBERON:0002308,9.06e-10,3;UBERON:0003076,9.09e-10,12;UBERON:0003057,9.09e-10,12;UBERON:0004684,2.87e-09,3;UBERON:0002275,2.87e-09,3;UBERON:0000025,1.46e-08,114;UBERON:0001948,2.13e-08,5;UBERON:0002315,2.13e-08,5;UBERON:0004111,1.16e-07,122;UBERON:0011216,1.58e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0,0.420649922702764,2.28520787523043,1.76694832761291,0.61245399607477,0.287536413054709,0,3.30347642998166,4.59674417106676,5.06901559745603,7.12185953743047,6.95306091378313,5.2091337055676,4.18774498502071,10.1297269805702,12.6822545654752,2.35702868378934,2.13557521198654,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39246301857362,2.74500361691176,1.13088916901578,1.73824320192276,0.767146371990992,5.81806524766768,3.56930778749067,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.388902376688095,0,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,2.06223818812425,1.37016503954128,0,0.675022500231806,0.45032120322422,0.906284817968409,1.55328093525546,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.183843508450014,0,0.206035057238894,0,1.01078884705519,1.01391719956096,0.565879024158229,0.187283014939765,0.512201219238954,0.34461281373368,0.476293691283074,0.231768651889711,0.38581844092741,0,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.591026894253381,0,0.619747364743864,0.578719832943424,0.999242311751784,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p2@Celf6 | |||
}} |
Revision as of 10:11, 5 August 2015
Short description: | p2@Celf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Celf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000118164, uc009pxy.1, uc012guo.1_5end |
EntrezGene: | 76183 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-28 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-28 | 23 |
neuron | 1.56e-18 | 33 |
neuronal stem cell | 1.56e-18 | 33 |
neuroblast | 1.56e-18 | 33 |
electrically signaling cell | 1.56e-18 | 33 |
electrically responsive cell | 4.08e-15 | 39 |
electrically active cell | 4.08e-15 | 39 |
neural cell | 2.28e-13 | 43 |
ectodermal cell | 5.54e-13 | 44 |
neurectodermal cell | 5.54e-13 | 44 |
neuron of the substantia nigra | 9.06e-10 | 3 |
striatum neuron | 9.67e-10 | 3 |
raphe nuclei neuron | 2.87e-09 | 3 |
granule cell | 6.85e-09 | 3 |
embryonic cell | 7.61e-07 | 70 |