FFCP PHASE1:Mm9::chr6:30754878..30754887,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=145|UniProt=|association_with_transcript=94bp_to_uc009bfw.1_5end|description=CAGE_peak_9_at_uc009bfw.1_5end|id=chr6:30754878..30754887,+|ontology_enrichment_celltype=CL:0000117!3.05e-12!23;CL:0000337!3.05e-12!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.70e-11,3;CL:0002612,4.36e-11,3;CL:0000117,1.14e-08,23;CL:0000337,1.14e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.60e-19!34;UBERON:0001049!1.75e-19!52;UBERON:0005068!1.75e-19!52;UBERON:0006241!1.75e-19!52;UBERON:0007135!1.75e-19!52;UBERON:0000955!1.19e-17!50;UBERON:0006238!1.19e-17!50;UBERON:0002616!4.27e-17!49;UBERON:0000033!6.18e-17!63;UBERON:0002346!1.34e-16!71;UBERON:0003075!1.34e-16!71;UBERON:0007284!1.34e-16!71;UBERON:0001017!2.94e-16!73;UBERON:0005743!2.94e-16!73;UBERON:0000073!2.04e-15!75;UBERON:0001016!2.04e-15!75;UBERON:0003056!2.59e-15!49;UBERON:0002791!5.35e-15!29;UBERON:0003528!5.35e-15!29;UBERON:0001893!5.35e-15!29;UBERON:0003080!5.27e-14!40;UBERON:0002780!3.00e-13!39;UBERON:0001890!3.00e-13!39;UBERON:0006240!3.00e-13!39;UBERON:0000025!1.51e-12!114;UBERON:0004121!2.13e-12!102;UBERON:0000924!2.13e-12!102;UBERON:0006601!2.13e-12!102;UBERON:0002021!8.64e-11!10;UBERON:0000411!8.64e-11!10;UBERON:0001950!8.64e-11!10;UBERON:0004111!1.38e-10!122;UBERON:0002619!1.97e-09!17;UBERON:0000956!5.51e-09!21;UBERON:0001869!5.51e-09!21;UBERON:0000203!5.51e-09!21;UBERON:0007811!8.46e-09!86;UBERON:0002420!9.62e-08!8;UBERON:0007245!9.62e-08!8;UBERON:0010009!9.62e-08!8;UBERON:0010011!9.62e-08!8;UBERON:0000454!9.62e-08!8;UBERON:0002240!4.01e-07!6;UBERON:0005174!4.01e-07!6;UBERON:0001137!4.01e-07!6;UBERON:0000153!5.00e-07!94;UBERON:0002298!8.30e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001049,4.82e-22,52;UBERON:0005068,4.82e-22,52;UBERON:0006241,4.82e-22,52;UBERON:0007135,4.82e-22,52;UBERON:0001017,1.79e-20,73;UBERON:0002021,2.28e-20,10;UBERON:0000411,2.28e-20,10;UBERON:0001950,2.28e-20,10;UBERON:0001016,8.19e-20,75;UBERON:0002020,2.61e-19,34;UBERON:0002346,3.51e-17,64;UBERON:0003075,3.51e-17,64;UBERON:0007284,3.51e-17,64;UBERON:0002616,2.55e-15,46;UBERON:0000955,6.32e-15,47;UBERON:0006238,6.32e-15,47;UBERON:0004121,9.80e-15,95;UBERON:0000924,9.80e-15,95;UBERON:0006601,9.80e-15,95;UBERON:0010371,1.40e-14,73;UBERON:0002619,1.70e-14,17;UBERON:0003528,2.73e-14,29;UBERON:0002791,2.73e-14,29;UBERON:0001893,2.73e-14,29;UBERON:0002780,6.90e-14,39;UBERON:0001890,6.90e-14,39;UBERON:0006240,6.90e-14,39;UBERON:0003080,1.80e-13,40;UBERON:0004684,1.70e-11,3;UBERON:0002275,1.70e-11,3;UBERON:0000956,1.86e-11,21;UBERON:0001869,1.86e-11,21;UBERON:0000203,1.86e-11,21;UBERON:0002257,4.36e-11,3;UBERON:0010314,9.33e-11,92;UBERON:0003056,1.69e-10,49;UBERON:0003076,5.93e-10,12;UBERON:0003057,5.93e-10,12;UBERON:0002240,1.33e-09,6;UBERON:0005174,1.33e-09,6;UBERON:0001137,1.33e-09,6;UBERON:0000025,4.71e-09,114;UBERON:0004111,3.45e-08,122;UBERON:0001896,9.13e-08,2;UBERON:0002298,9.13e-08,2;UBERON:0005290,9.13e-08,2;UBERON:0010096,9.13e-08,2;UBERON:0001948,8.22e-07,5;UBERON:0002315,8.22e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.883474163806454,0.244981598429908,0.0958454710182364,0,3.30347642998166,3.57524546638526,7.0659005297872,0.395658863190582,0.823388792421687,1.56274011167028,0.558365998002762,0.56276261003168,6.26472815884921,4.71405736757868,4.27115042397309,1.3047961207771,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.00523481690292,0.521472960576829,1.27857728665165,1.45451631191692,1.46017136760982,0,0,0,0.420883711772948,0,0,0,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.439100230582101,0,0.210289948564127,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,4.31304619582064,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.585400943573396,0.472905432318573,0.664394068946325,0.797273843287435,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.40825884981688,2.57865710502847,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,1.14579102687879,2.06223818812425,0.685082519770642,3.0215755895588,0.675022500231806,1.80128481289688,2.26571204492102,3.62432218226274,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0,0,0,0.423073039458382,0.182927972872773,1.05227884575137,0.135804113845862,0,0.355905054372522,0.492522411877817,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p9@uc009bfw.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=94bp_to_uc009bfw.1_5end | |||
|cluster_id=chr6:30754878..30754887,+ | |||
|description=CAGE_peak_9_at_uc009bfw.1_5end | |||
|id=chr6:30754878..30754887,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.05e-12!23;CL:0000337!3.05e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.70e-11,3;CL:0002612,4.36e-11,3;CL:0000117,1.14e-08,23;CL:0000337,1.14e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.60e-19!34;UBERON:0001049!1.75e-19!52;UBERON:0005068!1.75e-19!52;UBERON:0006241!1.75e-19!52;UBERON:0007135!1.75e-19!52;UBERON:0000955!1.19e-17!50;UBERON:0006238!1.19e-17!50;UBERON:0002616!4.27e-17!49;UBERON:0000033!6.18e-17!63;UBERON:0002346!1.34e-16!71;UBERON:0003075!1.34e-16!71;UBERON:0007284!1.34e-16!71;UBERON:0001017!2.94e-16!73;UBERON:0005743!2.94e-16!73;UBERON:0000073!2.04e-15!75;UBERON:0001016!2.04e-15!75;UBERON:0003056!2.59e-15!49;UBERON:0002791!5.35e-15!29;UBERON:0003528!5.35e-15!29;UBERON:0001893!5.35e-15!29;UBERON:0003080!5.27e-14!40;UBERON:0002780!3.00e-13!39;UBERON:0001890!3.00e-13!39;UBERON:0006240!3.00e-13!39;UBERON:0000025!1.51e-12!114;UBERON:0004121!2.13e-12!102;UBERON:0000924!2.13e-12!102;UBERON:0006601!2.13e-12!102;UBERON:0002021!8.64e-11!10;UBERON:0000411!8.64e-11!10;UBERON:0001950!8.64e-11!10;UBERON:0004111!1.38e-10!122;UBERON:0002619!1.97e-09!17;UBERON:0000956!5.51e-09!21;UBERON:0001869!5.51e-09!21;UBERON:0000203!5.51e-09!21;UBERON:0007811!8.46e-09!86;UBERON:0002420!9.62e-08!8;UBERON:0007245!9.62e-08!8;UBERON:0010009!9.62e-08!8;UBERON:0010011!9.62e-08!8;UBERON:0000454!9.62e-08!8;UBERON:0002240!4.01e-07!6;UBERON:0005174!4.01e-07!6;UBERON:0001137!4.01e-07!6;UBERON:0000153!5.00e-07!94;UBERON:0002298!8.30e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001049,4.82e-22,52;UBERON:0005068,4.82e-22,52;UBERON:0006241,4.82e-22,52;UBERON:0007135,4.82e-22,52;UBERON:0001017,1.79e-20,73;UBERON:0002021,2.28e-20,10;UBERON:0000411,2.28e-20,10;UBERON:0001950,2.28e-20,10;UBERON:0001016,8.19e-20,75;UBERON:0002020,2.61e-19,34;UBERON:0002346,3.51e-17,64;UBERON:0003075,3.51e-17,64;UBERON:0007284,3.51e-17,64;UBERON:0002616,2.55e-15,46;UBERON:0000955,6.32e-15,47;UBERON:0006238,6.32e-15,47;UBERON:0004121,9.80e-15,95;UBERON:0000924,9.80e-15,95;UBERON:0006601,9.80e-15,95;UBERON:0010371,1.40e-14,73;UBERON:0002619,1.70e-14,17;UBERON:0003528,2.73e-14,29;UBERON:0002791,2.73e-14,29;UBERON:0001893,2.73e-14,29;UBERON:0002780,6.90e-14,39;UBERON:0001890,6.90e-14,39;UBERON:0006240,6.90e-14,39;UBERON:0003080,1.80e-13,40;UBERON:0004684,1.70e-11,3;UBERON:0002275,1.70e-11,3;UBERON:0000956,1.86e-11,21;UBERON:0001869,1.86e-11,21;UBERON:0000203,1.86e-11,21;UBERON:0002257,4.36e-11,3;UBERON:0010314,9.33e-11,92;UBERON:0003056,1.69e-10,49;UBERON:0003076,5.93e-10,12;UBERON:0003057,5.93e-10,12;UBERON:0002240,1.33e-09,6;UBERON:0005174,1.33e-09,6;UBERON:0001137,1.33e-09,6;UBERON:0000025,4.71e-09,114;UBERON:0004111,3.45e-08,122;UBERON:0001896,9.13e-08,2;UBERON:0002298,9.13e-08,2;UBERON:0005290,9.13e-08,2;UBERON:0010096,9.13e-08,2;UBERON:0001948,8.22e-07,5;UBERON:0002315,8.22e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.883474163806454,0.244981598429908,0.0958454710182364,0,3.30347642998166,3.57524546638526,7.0659005297872,0.395658863190582,0.823388792421687,1.56274011167028,0.558365998002762,0.56276261003168,6.26472815884921,4.71405736757868,4.27115042397309,1.3047961207771,0,0,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,1.00523481690292,0.521472960576829,1.27857728665165,1.45451631191692,1.46017136760982,0,0,0,0.420883711772948,0,0,0,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.439100230582101,0,0.210289948564127,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,4.31304619582064,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0.585400943573396,0.472905432318573,0.664394068946325,0.797273843287435,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.40825884981688,2.57865710502847,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,1.14579102687879,2.06223818812425,0.685082519770642,3.0215755895588,0.675022500231806,1.80128481289688,2.26571204492102,3.62432218226274,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0,0,0,0.423073039458382,0.182927972872773,1.05227884575137,0.135804113845862,0,0.355905054372522,0.492522411877817,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p9@uc009bfw.1 | |||
}} |
Latest revision as of 13:48, 5 August 2015
Short description: | p9@uc009bfw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_uc009bfw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | 94bp_to_uc009bfw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.70e-11 | 3 |
neuron of the ventral spinal cord | 4.36e-11 | 3 |
CNS neuron (sensu Vertebrata) | 1.14e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-08 | 23 |