FFCP PHASE1:Mm9::chr4:62295431..62295447,+: Difference between revisions
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{{FFCP|EntrezGene=50780|HGNC=|MCL_coexpression_id=7|UniProt=Q9DC04|association_with_transcript=19bp_to_ENSMUST00000142684,ENSMUST00000144489,uc008tfg.1,uc008tfh.2_5end|description=CAGE_peak_12_at_Rgs3_5end|id=chr4:62295431..62295447,+|ontology_enrichment_celltype=CL:0000791!1.13e-10!9;CL:0000789!1.13e-10!9;CL:0002420!1.13e-10!9;CL:0002419!1.13e-10!9;CL:0000790!1.13e-10!9;CL:0000838!1.53e-10!12;CL:0000084!4.17e-10!11;CL:0000827!4.17e-10!11;CL:0000624!1.25e-09!8;CL:0000542!2.08e-09!13;CL:0000051!2.08e-09!13;CL:0002031!9.71e-08!25;CL:0000893!1.26e-07!6;CL:0002489!1.26e-07!6;CL:0000898!1.26e-07!6;CL:0000809!1.26e-07!6;CL:0000810!1.26e-07!6;CL:0000895!1.26e-07!6;CL:0000808!1.26e-07!6;CL:0000894!1.26e-07!6;CL:0000806!1.26e-07!6;CL:0000807!1.26e-07!6;CL:0000805!1.26e-07!6;CL:0002425!1.26e-07!6;CL:0002436!1.26e-07!6;CL:0002427!1.26e-07!6;CL:0002428!1.26e-07!6;CL:0002429!1.26e-07!6;CL:0002433!1.26e-07!6;CL:0002431!1.26e-07!6;CL:0002432!1.26e-07!6;CL:0000738!2.16e-07!17;CL:0002087!2.16e-07!17|ontology_enrichment_celltype_v019_2=CL:0000791,1.07e-37,9;CL:0000789,1.07e-37,9;CL:0002420,1.07e-37,9;CL:0002419,1.07e-37,9;CL:0000790,1.07e-37,9;CL:0000624,1.53e-33,8;CL:0000084,1.32e-30,11;CL:0000827,1.32e-30,11;CL:0000838,6.03e-28,12;CL:0000542,1.08e-25,13;CL:0000051,1.08e-25,13;CL:0000893,1.40e-25,6;CL:0002489,1.40e-25,6;CL:0000898,1.40e-25,6;CL:0000809,1.40e-25,6;CL:0000810,1.40e-25,6;CL:0000895,1.40e-25,6;CL:0000808,1.40e-25,6;CL:0000894,1.40e-25,6;CL:0000806,1.40e-25,6;CL:0000807,1.40e-25,6;CL:0000805,1.40e-25,6;CL:0002425,1.40e-25,6;CL:0002436,1.40e-25,6;CL:0002427,1.40e-25,6;CL:0002428,1.40e-25,6;CL:0002429,1.40e-25,6;CL:0002433,1.40e-25,6;CL:0002431,1.40e-25,6;CL:0002432,1.40e-25,6;CL:0000738,2.49e-19,17;CL:0002087,2.49e-19,17;CL:0002031,7.21e-19,25;CL:0000988,2.48e-14,32;CL:0002032,2.48e-14,32;CL:0000037,2.48e-14,32;CL:0000837,2.48e-14,32;CL:0002320,2.14e-09,46;CL:0000134,2.14e-09,46;CL:0000219,1.01e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.28e-14!29;UBERON:0002193!1.35e-13!48;UBERON:0002370!2.41e-12!23;UBERON:0000974!2.41e-12!23;UBERON:0004807!2.41e-12!23;UBERON:0005058!2.41e-12!23;UBERON:0003351!2.41e-12!23;UBERON:0009113!2.41e-12!23;UBERON:0003295!2.41e-12!23;UBERON:0009722!2.41e-12!23;UBERON:0005562!2.41e-12!23;UBERON:0007690!2.41e-12!23;UBERON:0002405!1.02e-11!70;UBERON:0002390!1.07e-11!45;UBERON:0003061!1.07e-11!45;UBERON:0006562!1.56e-11!24;UBERON:0003408!1.56e-11!24;UBERON:0001557!1.56e-11!24;UBERON:0001042!1.56e-11!24;UBERON:0008814!1.56e-11!24;UBERON:0009145!1.56e-11!24;UBERON:0005057!1.56e-10!51;UBERON:0000072!1.74e-09!27;UBERON:0002368!7.00e-08!60;UBERON:0002530!8.13e-08!65;UBERON:0004119!1.87e-07!130;UBERON:0000925!1.87e-07!130;UBERON:0006595!1.87e-07!130;UBERON:0000065!2.06e-07!41;UBERON:0001007!2.27e-07!128;UBERON:0001555!2.27e-07!128;UBERON:0007026!2.27e-07!128;UBERON:0001004!4.64e-07!42;UBERON:0000063!9.99e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.38e-21,29;UBERON:0005057,1.38e-21,29;UBERON:0002193,4.30e-19,48;UBERON:0002405,4.30e-19,48;UBERON:0002390,8.40e-18,45;UBERON:0003061,8.40e-18,45;UBERON:0000077,1.67e-17,35;UBERON:0002370,1.49e-16,23;UBERON:0000974,1.49e-16,23;UBERON:0004807,1.49e-16,23;UBERON:0005058,1.49e-16,23;UBERON:0003351,1.49e-16,23;UBERON:0009113,1.49e-16,23;UBERON:0003295,1.49e-16,23;UBERON:0009722,1.49e-16,23;UBERON:0005562,1.49e-16,23;UBERON:0007690,1.49e-16,23;UBERON:0006562,8.52e-16,24;UBERON:0003408,8.52e-16,24;UBERON:0001557,8.52e-16,24;UBERON:0001042,8.52e-16,24;UBERON:0008814,8.52e-16,24;UBERON:0009145,8.52e-16,24;UBERON:0000072,7.30e-14,27;UBERON:0007811,5.41e-10,36;UBERON:0002384,2.14e-09,46;UBERON:0003081,3.65e-09,87;UBERON:0000065,1.41e-08,41;UBERON:0001004,2.47e-08,42;UBERON:0000153,4.21e-08,43;UBERON:0000926,8.60e-07,120;UBERON:0004120,8.60e-07,120;UBERON:0006603,8.60e-07,120|phase1_expression=0,0,0,0,0,0,0,12.7832090207161,24.49723765439,33.2371627377231,5.65019295144166,8.45584885350566,8.38883576662908,11.3646523144697,0,0.404950534779652,0,3.15462165358238,1.91960207048034,0.84877930359606,0.510259740906419,0.992909512008853,0,0.47997726838022,0.45881856213434,0,0,0,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,6.5282592781021,13.1076581665561,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,10.3575153458869,1.33597925158342,0.173485326766136,0,0,0,0.352766121407114,0.125666591329675,0,1.01219549843938,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,3.96502539580558,0,0,0,0,0,0.444756087689741,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.485561272309963,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.70870880797853,0,0,0.753473828018764,1.6403307326523,1.37266903923914,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,0.469428954583016,0.781226309063701,0.314578033277133,0,0,2.21207784439725,0,0.616265742988964,0.25984164595559,0.537080087002444,0.596044064343795,0.480781798079875,0.738447635872886,0.504832249740738,0.228620419965,0.504130925684203,2.53390489923356,1.44317762460494,1.8700304349051,0,0,0,0,0,0.750729901804728,0.915758121336325,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p12@Rgs3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50780 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9DC04 | |||
|association_with_transcript=19bp_to_ENSMUST00000142684,ENSMUST00000144489,uc008tfg.1,uc008tfh.2_5end | |||
|cluster_id=chr4:62295431..62295447,+ | |||
|description=CAGE_peak_12_at_Rgs3_5end | |||
|id=chr4:62295431..62295447,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.13e-10!9;CL:0000789!1.13e-10!9;CL:0002420!1.13e-10!9;CL:0002419!1.13e-10!9;CL:0000790!1.13e-10!9;CL:0000838!1.53e-10!12;CL:0000084!4.17e-10!11;CL:0000827!4.17e-10!11;CL:0000624!1.25e-09!8;CL:0000542!2.08e-09!13;CL:0000051!2.08e-09!13;CL:0002031!9.71e-08!25;CL:0000893!1.26e-07!6;CL:0002489!1.26e-07!6;CL:0000898!1.26e-07!6;CL:0000809!1.26e-07!6;CL:0000810!1.26e-07!6;CL:0000895!1.26e-07!6;CL:0000808!1.26e-07!6;CL:0000894!1.26e-07!6;CL:0000806!1.26e-07!6;CL:0000807!1.26e-07!6;CL:0000805!1.26e-07!6;CL:0002425!1.26e-07!6;CL:0002436!1.26e-07!6;CL:0002427!1.26e-07!6;CL:0002428!1.26e-07!6;CL:0002429!1.26e-07!6;CL:0002433!1.26e-07!6;CL:0002431!1.26e-07!6;CL:0002432!1.26e-07!6;CL:0000738!2.16e-07!17;CL:0002087!2.16e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.07e-37,9;CL:0000789,1.07e-37,9;CL:0002420,1.07e-37,9;CL:0002419,1.07e-37,9;CL:0000790,1.07e-37,9;CL:0000624,1.53e-33,8;CL:0000084,1.32e-30,11;CL:0000827,1.32e-30,11;CL:0000838,6.03e-28,12;CL:0000542,1.08e-25,13;CL:0000051,1.08e-25,13;CL:0000893,1.40e-25,6;CL:0002489,1.40e-25,6;CL:0000898,1.40e-25,6;CL:0000809,1.40e-25,6;CL:0000810,1.40e-25,6;CL:0000895,1.40e-25,6;CL:0000808,1.40e-25,6;CL:0000894,1.40e-25,6;CL:0000806,1.40e-25,6;CL:0000807,1.40e-25,6;CL:0000805,1.40e-25,6;CL:0002425,1.40e-25,6;CL:0002436,1.40e-25,6;CL:0002427,1.40e-25,6;CL:0002428,1.40e-25,6;CL:0002429,1.40e-25,6;CL:0002433,1.40e-25,6;CL:0002431,1.40e-25,6;CL:0002432,1.40e-25,6;CL:0000738,2.49e-19,17;CL:0002087,2.49e-19,17;CL:0002031,7.21e-19,25;CL:0000988,2.48e-14,32;CL:0002032,2.48e-14,32;CL:0000037,2.48e-14,32;CL:0000837,2.48e-14,32;CL:0002320,2.14e-09,46;CL:0000134,2.14e-09,46;CL:0000219,1.01e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.28e-14!29;UBERON:0002193!1.35e-13!48;UBERON:0002370!2.41e-12!23;UBERON:0000974!2.41e-12!23;UBERON:0004807!2.41e-12!23;UBERON:0005058!2.41e-12!23;UBERON:0003351!2.41e-12!23;UBERON:0009113!2.41e-12!23;UBERON:0003295!2.41e-12!23;UBERON:0009722!2.41e-12!23;UBERON:0005562!2.41e-12!23;UBERON:0007690!2.41e-12!23;UBERON:0002405!1.02e-11!70;UBERON:0002390!1.07e-11!45;UBERON:0003061!1.07e-11!45;UBERON:0006562!1.56e-11!24;UBERON:0003408!1.56e-11!24;UBERON:0001557!1.56e-11!24;UBERON:0001042!1.56e-11!24;UBERON:0008814!1.56e-11!24;UBERON:0009145!1.56e-11!24;UBERON:0005057!1.56e-10!51;UBERON:0000072!1.74e-09!27;UBERON:0002368!7.00e-08!60;UBERON:0002530!8.13e-08!65;UBERON:0004119!1.87e-07!130;UBERON:0000925!1.87e-07!130;UBERON:0006595!1.87e-07!130;UBERON:0000065!2.06e-07!41;UBERON:0001007!2.27e-07!128;UBERON:0001555!2.27e-07!128;UBERON:0007026!2.27e-07!128;UBERON:0001004!4.64e-07!42;UBERON:0000063!9.99e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.38e-21,29;UBERON:0005057,1.38e-21,29;UBERON:0002193,4.30e-19,48;UBERON:0002405,4.30e-19,48;UBERON:0002390,8.40e-18,45;UBERON:0003061,8.40e-18,45;UBERON:0000077,1.67e-17,35;UBERON:0002370,1.49e-16,23;UBERON:0000974,1.49e-16,23;UBERON:0004807,1.49e-16,23;UBERON:0005058,1.49e-16,23;UBERON:0003351,1.49e-16,23;UBERON:0009113,1.49e-16,23;UBERON:0003295,1.49e-16,23;UBERON:0009722,1.49e-16,23;UBERON:0005562,1.49e-16,23;UBERON:0007690,1.49e-16,23;UBERON:0006562,8.52e-16,24;UBERON:0003408,8.52e-16,24;UBERON:0001557,8.52e-16,24;UBERON:0001042,8.52e-16,24;UBERON:0008814,8.52e-16,24;UBERON:0009145,8.52e-16,24;UBERON:0000072,7.30e-14,27;UBERON:0007811,5.41e-10,36;UBERON:0002384,2.14e-09,46;UBERON:0003081,3.65e-09,87;UBERON:0000065,1.41e-08,41;UBERON:0001004,2.47e-08,42;UBERON:0000153,4.21e-08,43;UBERON:0000926,8.60e-07,120;UBERON:0004120,8.60e-07,120;UBERON:0006603,8.60e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,12.7832090207161,24.49723765439,33.2371627377231,5.65019295144166,8.45584885350566,8.38883576662908,11.3646523144697,0,0.404950534779652,0,3.15462165358238,1.91960207048034,0.84877930359606,0.510259740906419,0.992909512008853,0,0.47997726838022,0.45881856213434,0,0,0,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,6.5282592781021,13.1076581665561,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.34255163915718,10.3575153458869,1.33597925158342,0.173485326766136,0,0,0,0.352766121407114,0.125666591329675,0,1.01219549843938,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,3.96502539580558,0,0,0,0,0,0.444756087689741,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.485561272309963,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.70870880797853,0,0,0.753473828018764,1.6403307326523,1.37266903923914,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,0.469428954583016,0.781226309063701,0.314578033277133,0,0,2.21207784439725,0,0.616265742988964,0.25984164595559,0.537080087002444,0.596044064343795,0.480781798079875,0.738447635872886,0.504832249740738,0.228620419965,0.504130925684203,2.53390489923356,1.44317762460494,1.8700304349051,0,0,0,0,0,0.750729901804728,0.915758121336325,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Rgs3 | |||
}} |
Revision as of 16:17, 5 August 2015
Short description: | p12@Rgs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rgs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 19bp_to_ENSMUST00000142684, ENSMUST00000144489, uc008tfg.1, uc008tfh.2_5end |
EntrezGene: | 50780 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.38e-21 | 29 |
immune organ | 1.38e-21 | 29 |
hemolymphoid system | 4.30e-19 | 48 |
immune system | 4.30e-19 | 48 |
hematopoietic system | 8.40e-18 | 45 |
blood island | 8.40e-18 | 45 |
mixed endoderm/mesoderm-derived structure | 1.67e-17 | 35 |
thymus | 1.49e-16 | 23 |
neck | 1.49e-16 | 23 |
respiratory system epithelium | 1.49e-16 | 23 |
hemolymphoid system gland | 1.49e-16 | 23 |
pharyngeal epithelium | 1.49e-16 | 23 |
thymic region | 1.49e-16 | 23 |
pharyngeal gland | 1.49e-16 | 23 |
entire pharyngeal arch endoderm | 1.49e-16 | 23 |
thymus primordium | 1.49e-16 | 23 |
early pharyngeal endoderm | 1.49e-16 | 23 |
pharynx | 8.52e-16 | 24 |
gland of gut | 8.52e-16 | 24 |
upper respiratory tract | 8.52e-16 | 24 |
chordate pharynx | 8.52e-16 | 24 |
pharyngeal arch system | 8.52e-16 | 24 |
pharyngeal region of foregut | 8.52e-16 | 24 |
segment of respiratory tract | 7.30e-14 | 27 |
craniocervical region | 5.41e-10 | 36 |
connective tissue | 2.14e-09 | 46 |
lateral plate mesoderm | 3.65e-09 | 87 |
respiratory tract | 1.41e-08 | 41 |
respiratory system | 2.47e-08 | 42 |
anterior region of body | 4.21e-08 | 43 |
mesoderm | 8.60e-07 | 120 |
mesoderm-derived structure | 8.60e-07 | 120 |
presumptive mesoderm | 8.60e-07 | 120 |