FFCP PHASE1:Mm9::chr1:4761175..4761203,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=484|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:4761175..4761203,+|id=chr1:4761175..4761203,+|ontology_enrichment_celltype=CL:0000063!2.28e-20!66;CL:0000144!2.25e-15!121;CL:0000012!2.25e-15!121;CL:0002371!6.69e-14!118;CL:0000548!1.18e-12!115;CL:0000004!1.18e-12!115;CL:0000255!1.18e-12!115;CL:0000988!2.81e-11!32;CL:0002032!2.81e-11!32;CL:0000037!2.81e-11!32;CL:0000566!2.81e-11!32;CL:0000837!2.81e-11!32;CL:0000219!3.53e-10!54;CL:0002320!6.55e-10!46;CL:0000134!6.55e-10!46;CL:0002031!9.74e-10!25;CL:0000066!3.29e-09!25;CL:0002076!4.73e-09!15;CL:0000838!2.78e-08!12;CL:0000791!9.80e-08!9;CL:0000789!9.80e-08!9;CL:0002420!9.80e-08!9;CL:0002419!9.80e-08!9;CL:0000790!9.80e-08!9;CL:0000034!9.97e-08!97;CL:0000084!1.93e-07!11;CL:0000827!1.93e-07!11;CL:0000542!2.64e-07!13;CL:0000051!2.64e-07!13;CL:0000738!3.30e-07!17;CL:0002087!3.30e-07!17;CL:0002563!5.15e-07!9;CL:0002251!5.15e-07!9;CL:0000624!5.42e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,5.36e-21,32;CL:0002032,5.36e-21,32;CL:0000037,5.36e-21,32;CL:0000837,5.36e-21,32;CL:0002320,1.13e-18,46;CL:0000134,1.13e-18,46;CL:0000219,1.95e-17,54;CL:0002031,2.29e-17,25;CL:0000066,6.38e-16,25;CL:0000838,2.46e-14,12;CL:0002076,1.03e-13,15;CL:0000738,1.31e-13,17;CL:0002087,1.31e-13,17;CL:0000034,4.10e-13,97;CL:0000542,5.21e-13,13;CL:0000051,5.21e-13,13;CL:0000084,8.50e-13,11;CL:0000827,8.50e-13,11;CL:0000791,8.68e-13,9;CL:0000789,8.68e-13,9;CL:0002420,8.68e-13,9;CL:0002419,8.68e-13,9;CL:0000790,8.68e-13,9;CL:0000624,1.92e-11,8;CL:0000223,2.82e-11,20;CL:0000075,4.06e-10,7;CL:0000049,1.35e-09,19;CL:0002563,2.20e-09,9;CL:0002251,2.20e-09,9;CL:0000239,3.34e-09,6;CL:0000677,3.34e-09,6;CL:0000584,3.34e-09,6;CL:0000723,5.84e-09,91;CL:0000048,5.84e-09,91;CL:0000893,9.43e-09,6;CL:0002489,9.43e-09,6;CL:0000898,9.43e-09,6;CL:0000809,9.43e-09,6;CL:0000810,9.43e-09,6;CL:0000895,9.43e-09,6;CL:0000808,9.43e-09,6;CL:0000894,9.43e-09,6;CL:0000806,9.43e-09,6;CL:0000807,9.43e-09,6;CL:0000805,9.43e-09,6;CL:0002425,9.43e-09,6;CL:0002436,9.43e-09,6;CL:0002427,9.43e-09,6;CL:0002428,9.43e-09,6;CL:0002429,9.43e-09,6;CL:0002433,9.43e-09,6;CL:0002431,9.43e-09,6;CL:0002432,9.43e-09,6;CL:0000553,4.02e-07,6;CL:0000556,4.02e-07,6;CL:0000763,8.21e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!6.55e-10!46;UBERON:0000344!3.07e-09!15;UBERON:0000485!5.58e-08!11;UBERON:0001242!9.06e-08!13;UBERON:0000060!9.06e-08!13;UBERON:0001262!9.06e-08!13;UBERON:0004786!9.06e-08!13;UBERON:0003350!5.15e-07!9;UBERON:0004808!5.15e-07!9;UBERON:0001277!5.15e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.13e-18,46;UBERON:0000344,4.92e-14,15;UBERON:0001242,1.99e-11,13;UBERON:0001262,1.99e-11,13;UBERON:0004786,1.99e-11,13;UBERON:0000485,3.76e-11,11;UBERON:0003350,2.20e-09,9;UBERON:0004808,2.20e-09,9;UBERON:0001277,2.20e-09,9;UBERON:0004923,1.47e-07,24;UBERON:0002193,3.87e-07,48;UBERON:0002405,3.87e-07,48;UBERON:0002371,8.21e-07,16|phase1_expression=1.60148847104794,3.14077866875425,3.63999391511629,15.7281389879552,14.0250804384977,2.51818907867835,10.7461814673942,5.4231795845462,3.66050677594334,3.7450324211519,8.90333434772626,3.11111420081812,6.33442700745461,5.94458736449182,0,6.88415909125408,10.4934281719222,5.52058789376916,6.99283611389268,9.33657233955666,0.0850432901510698,0,9.92559198727954,7.03966660290989,5.96464130774642,3.44539178469012,2.58457197695445,3.878482188346,8.17100703662408,2.52030129759931,2.66076612786366,0.635030673459631,0,0,2.02196133825892,1.32987716286794,0.816677425049476,0.418531630736908,0.7813353445238,2.61761871986899,0.588231488031014,2.04913645487534,3.88408282424923,0.125896817975577,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,10.5703041816374,7.97898356212479,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0,0,0.284743361598206,0,4.39211921332468,3.17400552448499,6.37701875143691,12.0459342777394,0,0,0,0,0,0.170430322578058,3.89679006904303,3.88673531961374,2.81686839553361,6.41632387071589,2.54805239706646,0,3.89683873820185,4.81383744402687,3.0331466700887,0,0,0,0,0,0,0,0,0,0.247194967734374,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,0,3.71426885968353,4.79922184794726,3.17675567682662,0,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,5.40430604940902,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.402619256281115,0,0,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,13.5712155545345,6.52686820582452,0,0.275936746304732,0.321101179975584,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0,3.56954702987096,1.25956307091292,3.31679937130617,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,5.54964883435162,7.35653624197701,8.39423081820392,0,0,0,0,0,0,0,0.572895513439397,7.90524638780963,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr1:4761175..4761203,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=484 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:4761175..4761203,+ | |||
|description=CAGE_peak_at_chr1:4761175..4761203,+ | |||
|id=chr1:4761175..4761203,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.28e-20!66;CL:0000144!2.25e-15!121;CL:0000012!2.25e-15!121;CL:0002371!6.69e-14!118;CL:0000548!1.18e-12!115;CL:0000004!1.18e-12!115;CL:0000255!1.18e-12!115;CL:0000988!2.81e-11!32;CL:0002032!2.81e-11!32;CL:0000037!2.81e-11!32;CL:0000566!2.81e-11!32;CL:0000837!2.81e-11!32;CL:0000219!3.53e-10!54;CL:0002320!6.55e-10!46;CL:0000134!6.55e-10!46;CL:0002031!9.74e-10!25;CL:0000066!3.29e-09!25;CL:0002076!4.73e-09!15;CL:0000838!2.78e-08!12;CL:0000791!9.80e-08!9;CL:0000789!9.80e-08!9;CL:0002420!9.80e-08!9;CL:0002419!9.80e-08!9;CL:0000790!9.80e-08!9;CL:0000034!9.97e-08!97;CL:0000084!1.93e-07!11;CL:0000827!1.93e-07!11;CL:0000542!2.64e-07!13;CL:0000051!2.64e-07!13;CL:0000738!3.30e-07!17;CL:0002087!3.30e-07!17;CL:0002563!5.15e-07!9;CL:0002251!5.15e-07!9;CL:0000624!5.42e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.36e-21,32;CL:0002032,5.36e-21,32;CL:0000037,5.36e-21,32;CL:0000837,5.36e-21,32;CL:0002320,1.13e-18,46;CL:0000134,1.13e-18,46;CL:0000219,1.95e-17,54;CL:0002031,2.29e-17,25;CL:0000066,6.38e-16,25;CL:0000838,2.46e-14,12;CL:0002076,1.03e-13,15;CL:0000738,1.31e-13,17;CL:0002087,1.31e-13,17;CL:0000034,4.10e-13,97;CL:0000542,5.21e-13,13;CL:0000051,5.21e-13,13;CL:0000084,8.50e-13,11;CL:0000827,8.50e-13,11;CL:0000791,8.68e-13,9;CL:0000789,8.68e-13,9;CL:0002420,8.68e-13,9;CL:0002419,8.68e-13,9;CL:0000790,8.68e-13,9;CL:0000624,1.92e-11,8;CL:0000223,2.82e-11,20;CL:0000075,4.06e-10,7;CL:0000049,1.35e-09,19;CL:0002563,2.20e-09,9;CL:0002251,2.20e-09,9;CL:0000239,3.34e-09,6;CL:0000677,3.34e-09,6;CL:0000584,3.34e-09,6;CL:0000723,5.84e-09,91;CL:0000048,5.84e-09,91;CL:0000893,9.43e-09,6;CL:0002489,9.43e-09,6;CL:0000898,9.43e-09,6;CL:0000809,9.43e-09,6;CL:0000810,9.43e-09,6;CL:0000895,9.43e-09,6;CL:0000808,9.43e-09,6;CL:0000894,9.43e-09,6;CL:0000806,9.43e-09,6;CL:0000807,9.43e-09,6;CL:0000805,9.43e-09,6;CL:0002425,9.43e-09,6;CL:0002436,9.43e-09,6;CL:0002427,9.43e-09,6;CL:0002428,9.43e-09,6;CL:0002429,9.43e-09,6;CL:0002433,9.43e-09,6;CL:0002431,9.43e-09,6;CL:0002432,9.43e-09,6;CL:0000553,4.02e-07,6;CL:0000556,4.02e-07,6;CL:0000763,8.21e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.55e-10!46;UBERON:0000344!3.07e-09!15;UBERON:0000485!5.58e-08!11;UBERON:0001242!9.06e-08!13;UBERON:0000060!9.06e-08!13;UBERON:0001262!9.06e-08!13;UBERON:0004786!9.06e-08!13;UBERON:0003350!5.15e-07!9;UBERON:0004808!5.15e-07!9;UBERON:0001277!5.15e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.13e-18,46;UBERON:0000344,4.92e-14,15;UBERON:0001242,1.99e-11,13;UBERON:0001262,1.99e-11,13;UBERON:0004786,1.99e-11,13;UBERON:0000485,3.76e-11,11;UBERON:0003350,2.20e-09,9;UBERON:0004808,2.20e-09,9;UBERON:0001277,2.20e-09,9;UBERON:0004923,1.47e-07,24;UBERON:0002193,3.87e-07,48;UBERON:0002405,3.87e-07,48;UBERON:0002371,8.21e-07,16 | |||
|phase1_expression=1.60148847104794,3.14077866875425,3.63999391511629,15.7281389879552,14.0250804384977,2.51818907867835,10.7461814673942,5.4231795845462,3.66050677594334,3.7450324211519,8.90333434772626,3.11111420081812,6.33442700745461,5.94458736449182,0,6.88415909125408,10.4934281719222,5.52058789376916,6.99283611389268,9.33657233955666,0.0850432901510698,0,9.92559198727954,7.03966660290989,5.96464130774642,3.44539178469012,2.58457197695445,3.878482188346,8.17100703662408,2.52030129759931,2.66076612786366,0.635030673459631,0,0,2.02196133825892,1.32987716286794,0.816677425049476,0.418531630736908,0.7813353445238,2.61761871986899,0.588231488031014,2.04913645487534,3.88408282424923,0.125896817975577,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,10.5703041816374,7.97898356212479,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0,0,0.284743361598206,0,4.39211921332468,3.17400552448499,6.37701875143691,12.0459342777394,0,0,0,0,0,0.170430322578058,3.89679006904303,3.88673531961374,2.81686839553361,6.41632387071589,2.54805239706646,0,3.89683873820185,4.81383744402687,3.0331466700887,0,0,0,0,0,0,0,0,0,0.247194967734374,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,0,3.71426885968353,4.79922184794726,3.17675567682662,0,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,5.40430604940902,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.402619256281115,0,0,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,13.5712155545345,6.52686820582452,0,0.275936746304732,0.321101179975584,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0,3.56954702987096,1.25956307091292,3.31679937130617,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,5.54964883435162,7.35653624197701,8.39423081820392,0,0,0,0,0,0,0,0.572895513439397,7.90524638780963,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr1:4761175..4761203,+ | |||
}} |
Latest revision as of 17:14, 5 August 2015
Short description: | p@chr1:4761175..4761203, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:4761175..4761203, + |
Coexpression cluster: | MCL_coexpression_mm9:484 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.13e-18 | 46 |
mucosa | 4.92e-14 | 15 |
intestinal mucosa | 1.99e-11 | 13 |
wall of intestine | 1.99e-11 | 13 |
gastrointestinal system mucosa | 1.99e-11 | 13 |
simple columnar epithelium | 3.76e-11 | 11 |
epithelium of mucosa | 2.20e-09 | 9 |
gastrointestinal system epithelium | 2.20e-09 | 9 |
intestinal epithelium | 2.20e-09 | 9 |
organ component layer | 1.47e-07 | 24 |
hemolymphoid system | 3.87e-07 | 48 |
immune system | 3.87e-07 | 48 |
bone marrow | 8.21e-07 | 16 |